EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000029066 (Gene tree)
Gene ID: 66448
Gene Symbol: Mrpl20
Alias: 2610008D01Rik|4930425I20Rik
Full Name: mitochondrial ribosomal protein L20
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 7098 bases
Position: chr4:155802878-155809975
Accession: 2137221
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000030942	Ribosomal_L20	PF00453.18	7e-35	1	1
ENSMUSP00000139007	Ribosomal_L20	PF00453.18	1.4e-22	1	1
ENSMUSP00000139169	Ribosomal_L20	PF00453.18	1.3e-17	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000137487	-	810	-	ENSMUSP00000139122	149 (aa)	-	Q9CQL4
ENSMUST00000030942	-	764	XM_006539104	ENSMUSP00000030942	149 (aa)	XP_006539167	Q9CQL4
ENSMUST00000143503	-	579	-	-	- (aa)	-	-
ENSMUST00000184339	-	488	-	-	- (aa)	-	-
ENSMUST00000185148	-	494	-	ENSMUSP00000139169	112 (aa)	-	V9GXI7
ENSMUST00000130188	-	442	-	ENSMUSP00000139007	96 (aa)	-	V9GX65

Gene Model

Click here to download ENSMUSG00000029066's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000029066's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000029066	Mrpl20	100	87.919	ENSG00000242485	MRPL20	100	87.919	Homo_sapiens
ENSMUSG00000029066	Mrpl20	99	73.684	ENSAPOG00000011835	mrpl20	100	73.684	Acanthochromis_polyacanthus
ENSMUSG00000029066	Mrpl20	93	93.525	ENSAMEG00000013932	MRPL20	93	93.525	Ailuropoda_melanoleuca
ENSMUSG00000029066	Mrpl20	98	71.918	ENSACIG00000019179	mrpl20	98	71.918	Amphilophus_citrinellus
ENSMUSG00000029066	Mrpl20	98	71.233	ENSAOCG00000007734	mrpl20	98	71.233	Amphiprion_ocellaris
ENSMUSG00000029066	Mrpl20	97	72.043	ENSAPEG00000014049	mrpl20	98	70.548	Amphiprion_percula
ENSMUSG00000029066	Mrpl20	96	76.087	ENSATEG00000007369	mrpl20	98	71.233	Anabas_testudineus
ENSMUSG00000029066	Mrpl20	99	71.622	ENSACAG00000009143	MRPL20	99	71.622	Anolis_carolinensis
ENSMUSG00000029066	Mrpl20	100	79.605	ENSANAG00000021078	-	100	79.605	Aotus_nancymaae
ENSMUSG00000029066	Mrpl20	91	71.111	ENSACLG00000021726	mrpl20	87	71.111	Astatotilapia_calliptera
ENSMUSG00000029066	Mrpl20	80	68.908	ENSAMXG00000035403	mrpl20	84	68.908	Astyanax_mexicanus
ENSMUSG00000029066	Mrpl20	100	88.591	ENSBTAG00000004872	MRPL20	75	88.591	Bos_taurus
ENSMUSG00000029066	Mrpl20	100	89.262	ENSCJAG00000039231	-	100	89.262	Callithrix_jacchus
ENSMUSG00000029066	Mrpl20	100	91.946	ENSCAFG00000019259	MRPL20	100	91.946	Canis_familiaris
ENSMUSG00000029066	Mrpl20	74	90.361	ENSCAFG00020025880	-	65	89.189	Canis_lupus_dingo
ENSMUSG00000029066	Mrpl20	100	88.591	ENSCHIG00000010545	MRPL20	100	88.591	Capra_hircus
ENSMUSG00000029066	Mrpl20	100	93.960	ENSTSYG00000033620	MRPL20	100	93.960	Carlito_syrichta
ENSMUSG00000029066	Mrpl20	100	91.946	ENSCPOG00000023001	MRPL20	100	91.946	Cavia_porcellus
ENSMUSG00000029066	Mrpl20	100	90.604	ENSCCAG00000032768	-	100	90.604	Cebus_capucinus
ENSMUSG00000029066	Mrpl20	86	78.125	ENSCATG00000040437	-	67	78.125	Cercocebus_atys
ENSMUSG00000029066	Mrpl20	100	88.591	ENSCATG00000033927	MRPL20	100	88.591	Cercocebus_atys
ENSMUSG00000029066	Mrpl20	97	77.419	ENSCLAG00000011866	-	100	60.403	Chinchilla_lanigera
ENSMUSG00000029066	Mrpl20	100	90.179	ENSCLAG00000009757	-	100	90.179	Chinchilla_lanigera
ENSMUSG00000029066	Mrpl20	100	88.591	ENSCSAG00000000688	-	100	88.591	Chlorocebus_sabaeus
ENSMUSG00000029066	Mrpl20	100	87.919	ENSCSAG00000019479	-	100	87.919	Chlorocebus_sabaeus
ENSMUSG00000029066	Mrpl20	100	78.571	ENSCPBG00000022905	MRPL20	100	78.571	Chrysemys_picta_bellii
ENSMUSG00000029066	Mrpl20	100	76.744	ENSCANG00000039625	MRPL20	100	76.744	Colobus_angolensis_palliatus
ENSMUSG00000029066	Mrpl20	100	95.536	ENSCGRG00001024028	Mrpl20	100	95.536	Cricetulus_griseus_chok1gshd
ENSMUSG00000029066	Mrpl20	100	95.536	ENSCGRG00000007447	Mrpl20	100	95.536	Cricetulus_griseus_crigri
ENSMUSG00000029066	Mrpl20	97	70.968	ENSCSEG00000002016	mrpl20	85	69.863	Cynoglossus_semilaevis
ENSMUSG00000029066	Mrpl20	98	68.493	ENSCVAG00000022768	mrpl20	99	68.493	Cyprinodon_variegatus
ENSMUSG00000029066	Mrpl20	100	63.758	ENSDARG00000090462	mrpl20	100	63.758	Danio_rerio
ENSMUSG00000029066	Mrpl20	99	87.162	ENSDNOG00000044958	MRPL20	99	87.162	Dasypus_novemcinctus
ENSMUSG00000029066	Mrpl20	74	91.566	ENSDORG00000028591	Mrpl20	100	91.566	Dipodomys_ordii
ENSMUSG00000029066	Mrpl20	90	39.535	FBgn0036335	mRpL20	82	39.837	Drosophila_melanogaster
ENSMUSG00000029066	Mrpl20	99	71.622	ENSETEG00000012315	MRPL20	99	71.622	Echinops_telfairi
ENSMUSG00000029066	Mrpl20	99	65.986	ENSEBUG00000002214	mrpl20	99	65.986	Eptatretus_burgeri
ENSMUSG00000029066	Mrpl20	100	89.933	ENSEASG00005014515	MRPL20	100	89.933	Equus_asinus_asinus
ENSMUSG00000029066	Mrpl20	100	89.933	ENSECAG00000018364	MRPL20	100	89.933	Equus_caballus
ENSMUSG00000029066	Mrpl20	81	69.167	ENSEEUG00000004596	-	100	69.167	Erinaceus_europaeus
ENSMUSG00000029066	Mrpl20	100	71.875	ENSELUG00000013398	mrpl20	98	71.918	Esox_lucius
ENSMUSG00000029066	Mrpl20	99	91.837	ENSFCAG00000033203	MRPL20	99	91.837	Felis_catus
ENSMUSG00000029066	Mrpl20	100	72.483	ENSFALG00000009334	MRPL20	100	72.483	Ficedula_albicollis
ENSMUSG00000029066	Mrpl20	100	90.604	ENSFDAG00000013320	MRPL20	100	90.604	Fukomys_damarensis
ENSMUSG00000029066	Mrpl20	98	67.808	ENSFHEG00000004769	mrpl20	99	67.808	Fundulus_heteroclitus
ENSMUSG00000029066	Mrpl20	96	69.565	ENSGMOG00000008125	mrpl20	100	67.361	Gadus_morhua
ENSMUSG00000029066	Mrpl20	100	77.181	ENSGALG00000001542	MRPL20	100	77.181	Gallus_gallus
ENSMUSG00000029066	Mrpl20	98	69.863	ENSGAFG00000021580	mrpl20	99	69.863	Gambusia_affinis
ENSMUSG00000029066	Mrpl20	98	70.548	ENSGACG00000001134	mrpl20	98	70.548	Gasterosteus_aculeatus
ENSMUSG00000029066	Mrpl20	100	77.852	ENSGAGG00000001945	MRPL20	100	77.852	Gopherus_agassizii
ENSMUSG00000029066	Mrpl20	100	87.919	ENSGGOG00000027251	-	100	87.919	Gorilla_gorilla
ENSMUSG00000029066	Mrpl20	97	72.043	ENSHBUG00000023626	mrpl20	98	70.548	Haplochromis_burtoni
ENSMUSG00000029066	Mrpl20	100	88.591	ENSHGLG00000017538	MRPL20	100	88.591	Heterocephalus_glaber_female
ENSMUSG00000029066	Mrpl20	100	89.262	ENSHGLG00100012816	MRPL20	100	89.262	Heterocephalus_glaber_male
ENSMUSG00000029066	Mrpl20	63	45.000	ENSHCOG00000010669	-	83	45.000	Hippocampus_comes
ENSMUSG00000029066	Mrpl20	96	71.739	ENSHCOG00000005830	mrpl20	98	65.068	Hippocampus_comes
ENSMUSG00000029066	Mrpl20	99	66.667	ENSIPUG00000018055	mrpl20	99	66.667	Ictalurus_punctatus
ENSMUSG00000029066	Mrpl20	100	93.750	ENSJJAG00000020728	Mrpl20	100	93.750	Jaculus_jaculus
ENSMUSG00000029066	Mrpl20	96	72.826	ENSKMAG00000021650	mrpl20	98	70.548	Kryptolebias_marmoratus
ENSMUSG00000029066	Mrpl20	97	70.968	ENSLBEG00000021562	mrpl20	98	69.863	Labrus_bergylta
ENSMUSG00000029066	Mrpl20	100	80.537	ENSLACG00000019149	MRPL20	100	80.537	Latimeria_chalumnae
ENSMUSG00000029066	Mrpl20	99	92.568	ENSLAFG00000010706	MRPL20	99	92.568	Loxodonta_africana
ENSMUSG00000029066	Mrpl20	100	88.591	ENSMFAG00000043214	MRPL20	100	88.591	Macaca_fascicularis
ENSMUSG00000029066	Mrpl20	94	76.429	ENSMFAG00000046195	-	83	76.429	Macaca_fascicularis
ENSMUSG00000029066	Mrpl20	96	85.870	ENSMMUG00000038877	MRPL20	99	62.069	Macaca_mulatta
ENSMUSG00000029066	Mrpl20	100	92.771	ENSMNEG00000041891	MRPL20	100	88.591	Macaca_nemestrina
ENSMUSG00000029066	Mrpl20	89	78.195	ENSMNEG00000000027	-	68	78.195	Macaca_nemestrina
ENSMUSG00000029066	Mrpl20	91	76.296	ENSMLEG00000037605	-	83	76.296	Mandrillus_leucophaeus
ENSMUSG00000029066	Mrpl20	81	90.833	ENSMLEG00000037086	MRPL20	100	90.833	Mandrillus_leucophaeus
ENSMUSG00000029066	Mrpl20	98	71.918	ENSMAMG00000023884	mrpl20	98	71.918	Mastacembelus_armatus
ENSMUSG00000029066	Mrpl20	97	72.043	ENSMZEG00005011376	mrpl20	98	70.548	Maylandia_zebra
ENSMUSG00000029066	Mrpl20	81	77.686	ENSMGAG00000002774	MRPL20	82	77.686	Meleagris_gallopavo
ENSMUSG00000029066	Mrpl20	100	94.643	ENSMAUG00000013299	Mrpl20	100	94.643	Mesocricetus_auratus
ENSMUSG00000029066	Mrpl20	100	90.604	ENSMICG00000041892	MRPL20	100	90.604	Microcebus_murinus
ENSMUSG00000029066	Mrpl20	100	89.262	ENSMOCG00000009545	-	100	89.262	Microtus_ochrogaster
ENSMUSG00000029066	Mrpl20	100	95.536	ENSMOCG00000000404	-	100	95.536	Microtus_ochrogaster
ENSMUSG00000029066	Mrpl20	97	68.807	ENSMMOG00000021753	mrpl20	97	68.807	Mola_mola
ENSMUSG00000029066	Mrpl20	100	79.866	ENSMODG00000006562	MRPL20	100	79.866	Monodelphis_domestica
ENSMUSG00000029066	Mrpl20	96	72.826	ENSMALG00000018593	mrpl20	98	70.548	Monopterus_albus
ENSMUSG00000029066	Mrpl20	100	99.329	MGP_CAROLIEiJ_G0026904	Mrpl20	100	99.329	Mus_caroli
ENSMUSG00000029066	Mrpl20	100	93.960	MGP_PahariEiJ_G0029252	Mrpl20	100	93.960	Mus_pahari
ENSMUSG00000029066	Mrpl20	100	100.000	MGP_SPRETEiJ_G0027898	Mrpl20	100	100.000	Mus_spretus
ENSMUSG00000029066	Mrpl20	100	89.262	ENSMLUG00000011857	MRPL20	100	89.262	Myotis_lucifugus
ENSMUSG00000029066	Mrpl20	100	93.960	ENSNGAG00000021688	Mrpl20	100	93.960	Nannospalax_galili
ENSMUSG00000029066	Mrpl20	97	72.043	ENSNBRG00000006018	mrpl20	98	70.548	Neolamprologus_brichardi
ENSMUSG00000029066	Mrpl20	75	91.667	ENSNLEG00000013868	-	82	91.667	Nomascus_leucogenys
ENSMUSG00000029066	Mrpl20	100	91.275	ENSODEG00000010734	MRPL20	100	91.275	Octodon_degus
ENSMUSG00000029066	Mrpl20	98	71.233	ENSONIG00000018914	mrpl20	98	71.233	Oreochromis_niloticus
ENSMUSG00000029066	Mrpl20	98	69.863	ENSORLG00000018304	mrpl20	98	69.863	Oryzias_latipes
ENSMUSG00000029066	Mrpl20	98	69.863	ENSORLG00020009128	mrpl20	98	69.863	Oryzias_latipes_hni
ENSMUSG00000029066	Mrpl20	98	69.863	ENSORLG00015005156	mrpl20	98	69.863	Oryzias_latipes_hsok
ENSMUSG00000029066	Mrpl20	98	71.233	ENSOMEG00000015654	mrpl20	98	71.233	Oryzias_melastigma
ENSMUSG00000029066	Mrpl20	100	91.946	ENSOGAG00000005968	MRPL20	100	91.946	Otolemur_garnettii
ENSMUSG00000029066	Mrpl20	100	88.591	ENSOARG00000003529	MRPL20	100	88.591	Ovis_aries
ENSMUSG00000029066	Mrpl20	100	87.919	ENSPPAG00000042350	-	100	87.919	Pan_paniscus
ENSMUSG00000029066	Mrpl20	99	92.517	ENSPPRG00000009188	MRPL20	99	92.517	Panthera_pardus
ENSMUSG00000029066	Mrpl20	79	92.135	ENSPTIG00000020769	MRPL20	98	92.135	Panthera_tigris_altaica
ENSMUSG00000029066	Mrpl20	100	87.919	ENSPTRG00000000029	MRPL20	100	87.919	Pan_troglodytes
ENSMUSG00000029066	Mrpl20	100	88.591	ENSPANG00000015802	MRPL20	100	88.591	Papio_anubis
ENSMUSG00000029066	Mrpl20	94	75.714	ENSPANG00000036197	-	100	75.714	Papio_anubis
ENSMUSG00000029066	Mrpl20	100	66.443	ENSPKIG00000002248	mrpl20	100	66.443	Paramormyrops_kingsleyae
ENSMUSG00000029066	Mrpl20	95	71.127	ENSPSIG00000003939	MRPL20	100	71.127	Pelodiscus_sinensis
ENSMUSG00000029066	Mrpl20	69	38.235	ENSPMGG00000022271	-	55	37.179	Periophthalmus_magnuspinnatus
ENSMUSG00000029066	Mrpl20	97	74.194	ENSPMGG00000003966	mrpl20	98	71.918	Periophthalmus_magnuspinnatus
ENSMUSG00000029066	Mrpl20	100	74.497	ENSPEMG00000009458	-	85	74.497	Peromyscus_maniculatus_bairdii
ENSMUSG00000029066	Mrpl20	71	39.706	ENSPMAG00000009990	-	75	40.000	Petromyzon_marinus
ENSMUSG00000029066	Mrpl20	100	81.208	ENSPCIG00000007747	MRPL20	100	81.208	Phascolarctos_cinereus
ENSMUSG00000029066	Mrpl20	98	68.493	ENSPFOG00000018163	mrpl20	99	68.493	Poecilia_formosa
ENSMUSG00000029066	Mrpl20	98	68.493	ENSPLAG00000016451	mrpl20	99	68.493	Poecilia_latipinna
ENSMUSG00000029066	Mrpl20	98	68.493	ENSPMEG00000002561	mrpl20	99	68.493	Poecilia_mexicana
ENSMUSG00000029066	Mrpl20	92	70.455	ENSPREG00000004925	mrpl20	99	63.946	Poecilia_reticulata
ENSMUSG00000029066	Mrpl20	99	90.541	ENSPCAG00000001425	MRPL20	99	90.541	Procavia_capensis
ENSMUSG00000029066	Mrpl20	99	81.081	ENSPCOG00000004450	-	99	81.081	Propithecus_coquereli
ENSMUSG00000029066	Mrpl20	100	89.933	ENSPCOG00000025653	-	100	89.933	Propithecus_coquereli
ENSMUSG00000029066	Mrpl20	97	72.043	ENSPNYG00000008626	mrpl20	98	70.548	Pundamilia_nyererei
ENSMUSG00000029066	Mrpl20	99	66.667	ENSPNAG00000016694	mrpl20	99	66.667	Pygocentrus_nattereri
ENSMUSG00000029066	Mrpl20	100	95.973	ENSRNOG00000018647	Mrpl20	100	95.973	Rattus_norvegicus
ENSMUSG00000029066	Mrpl20	100	89.262	ENSRBIG00000042278	MRPL20	100	89.262	Rhinopithecus_bieti
ENSMUSG00000029066	Mrpl20	100	89.262	ENSRROG00000003574	MRPL20	100	89.262	Rhinopithecus_roxellana
ENSMUSG00000029066	Mrpl20	74	90.361	ENSSBOG00000035454	-	100	90.361	Saimiri_boliviensis_boliviensis
ENSMUSG00000029066	Mrpl20	97	78.495	ENSSHAG00000008197	MRPL20	100	70.323	Sarcophilus_harrisii
ENSMUSG00000029066	Mrpl20	100	66.443	ENSSFOG00015016009	mrpl20	100	66.443	Scleropages_formosus
ENSMUSG00000029066	Mrpl20	98	71.918	ENSSMAG00000000214	mrpl20	98	71.918	Scophthalmus_maximus
ENSMUSG00000029066	Mrpl20	97	74.194	ENSSDUG00000008646	mrpl20	98	72.603	Seriola_dumerili
ENSMUSG00000029066	Mrpl20	97	74.194	ENSSLDG00000023171	mrpl20	98	72.603	Seriola_lalandi_dorsalis
ENSMUSG00000029066	Mrpl20	100	70.470	ENSSPUG00000016911	MRPL20	100	70.470	Sphenodon_punctatus
ENSMUSG00000029066	Mrpl20	99	74.737	ENSSPAG00000012887	mrpl20	98	71.233	Stegastes_partitus
ENSMUSG00000029066	Mrpl20	99	91.216	ENSSSCG00000033374	MRPL20	99	91.216	Sus_scrofa
ENSMUSG00000029066	Mrpl20	81	76.860	ENSTGUG00000003113	MRPL20	98	76.860	Taeniopygia_guttata
ENSMUSG00000029066	Mrpl20	97	72.043	ENSTRUG00000021410	mrpl20	97	68.966	Takifugu_rubripes
ENSMUSG00000029066	Mrpl20	100	70.470	ENSTNIG00000014657	mrpl20	100	70.470	Tetraodon_nigroviridis
ENSMUSG00000029066	Mrpl20	100	91.946	ENSTBEG00000008735	MRPL20	100	91.946	Tupaia_belangeri
ENSMUSG00000029066	Mrpl20	80	91.597	ENSTTRG00000017046	MRPL20	99	91.597	Tursiops_truncatus
ENSMUSG00000029066	Mrpl20	88	68.382	ENSUAMG00000028406	-	89	68.382	Ursus_americanus
ENSMUSG00000029066	Mrpl20	100	93.289	ENSUAMG00000012829	-	100	93.289	Ursus_americanus
ENSMUSG00000029066	Mrpl20	88	68.382	ENSUMAG00000003240	-	89	68.382	Ursus_maritimus
ENSMUSG00000029066	Mrpl20	83	86.735	ENSUMAG00000001917	-	86	86.735	Ursus_maritimus
ENSMUSG00000029066	Mrpl20	74	90.361	ENSVPAG00000001846	-	100	90.361	Vicugna_pacos
ENSMUSG00000029066	Mrpl20	100	92.617	ENSVVUG00000004455	MRPL20	100	92.617	Vulpes_vulpes
ENSMUSG00000029066	Mrpl20	100	73.154	ENSXETG00000011118	mrpl20	100	73.154	Xenopus_tropicalis
ENSMUSG00000029066	Mrpl20	98	67.808	ENSXCOG00000004220	mrpl20	99	67.808	Xiphophorus_couchianus
ENSMUSG00000029066	Mrpl20	98	67.808	ENSXMAG00000016652	mrpl20	99	67.808	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000027	ribosomal large subunit assembly	21873635.	IBA	Process
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	-	ISO	Function
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005761	mitochondrial ribosome	21873635.	IBA	Component
GO:0005761	mitochondrial ribosome	-	ISO	Component
GO:0005762	mitochondrial large ribosomal subunit	-	ISO	Component
GO:0005840	ribosome	-	IEA	Component
GO:0006412	translation	-	ISO	Process
GO:0019843	rRNA binding	-	IEA	Function