EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000029106 (Gene tree)
Gene ID: 11518
Gene Symbol: Add1
Alias: -
Full Name: adducin 1 (alpha)
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 58645
Position: chr5: 34573664-34632308
Accession: 87918
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000139044	-	650	-	-	- (aa)	-	-
ENSMUST00000201810	-	745	-	ENSMUSP00000144673	248 (aa)	-	A0A0J9YVI4
ENSMUST00000114338	-	4007	XM_006503681	ENSMUSP00000109977	632 (aa)	XP_006503744	Q9QYC0
ENSMUST00000152805	-	2370	-	ENSMUSP00000121402	160 (aa)	-	F6RDR0
ENSMUST00000137262	-	814	-	-	- (aa)	-	-
ENSMUST00000147574	-	872	-	ENSMUSP00000116075	141 (aa)	-	D3Z0T1
ENSMUST00000145986	-	412	-	-	- (aa)	-	-
ENSMUST00000114340	-	3761	XM_006503668	ENSMUSP00000109979	735 (aa)	XP_006503732	Q9QYC0
ENSMUST00000052836	-	2337	XM_006503678	ENSMUSP00000052266	662 (aa)	XP_006503741	F8WHZ9
ENSMUST00000114335	-	4547	XM_006503673	ENSMUSP00000109974	660 (aa)	XP_006503737	E9Q1K3
ENSMUST00000135321	-	407	-	ENSMUSP00000114984	135 (aa)	-	F6V4G5
ENSMUST00000146295	-	767	-	ENSMUSP00000118539	141 (aa)	-	D3Z0T1
ENSMUST00000001108	-	3898	XM_006503677	ENSMUSP00000001108	663 (aa)	XP_006503740	F8WGR0
ENSMUST00000144226	-	698	-	-	- (aa)	-	-
ENSMUST00000201368	-	2774	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000029106's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000029106's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000029106	Add1	100	97.872	ENSG00000087274	ADD1	100	98.462	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000902	cell morphogenesis	18723693.	IMP	Process
GO:0001701	in utero embryonic development	18723693.	IMP	Process
GO:0003779	actin binding	-	IEA	Function
GO:0005198	structural molecule activity	21873635.	IBA	Function
GO:0005198	structural molecule activity	10485892.	IDA	Function
GO:0005516	calmodulin binding	-	IEA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005856	cytoskeleton	21873635.	IBA	Component
GO:0005856	cytoskeleton	10485892.	IDA	Component
GO:0005886	plasma membrane	25978380.	IMP	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0005913	cell-cell adherens junction	21873635.	IBA	Component
GO:0005913	cell-cell adherens junction	25978380.	IMP	Component
GO:0005913	cell-cell adherens junction	-	ISO	Component
GO:0006884	cell volume homeostasis	18723693.	IMP	Process
GO:0008134	transcription factor binding	-	ISO	Function
GO:0008290	F-actin capping protein complex	-	ISO	Component
GO:0014069	postsynaptic density	21873635.	IBA	Component
GO:0014069	postsynaptic density	-	ISO	Component
GO:0016020	membrane	10485892.	IDA	Component
GO:0016604	nuclear body	-	ISO	Component
GO:0020027	hemoglobin metabolic process	18723693.	IMP	Process
GO:0030218	erythrocyte differentiation	18723693.	IMP	Process
GO:0030425	dendrite	-	ISO	Component
GO:0030507	spectrin binding	21873635.	IBA	Function
GO:0030507	spectrin binding	-	ISO	Function
GO:0030837	negative regulation of actin filament polymerization	-	ISO	Process
GO:0032092	positive regulation of protein binding	-	ISO	Process
GO:0035264	multicellular organism growth	18723693.	IMP	Process
GO:0042608	T cell receptor binding	-	ISO	Function
GO:0042803	protein homodimerization activity	-	ISO	Function
GO:0043197	dendritic spine	-	ISO	Component
GO:0044853	plasma membrane raft	21873635.	IBA	Component
GO:0045202	synapse	-	ISO	Component
GO:0045766	positive regulation of angiogenesis	-	ISO	Process
GO:0045807	positive regulation of endocytosis	-	ISO	Process
GO:0046982	protein heterodimerization activity	-	ISO	Function
GO:0048471	perinuclear region of cytoplasm	-	ISO	Component
GO:0048873	homeostasis of number of cells within a tissue	18723693.	IMP	Process
GO:0051015	actin filament binding	21873635.	IBA	Function
GO:0051015	actin filament binding	-	ISO	Function
GO:0051016	barbed-end actin filament capping	21873635.	IBA	Process
GO:0051016	barbed-end actin filament capping	-	ISO	Process
GO:0051017	actin filament bundle assembly	21873635.	IBA	Process
GO:0051017	actin filament bundle assembly	-	ISO	Process
GO:0071277	cellular response to calcium ion	25978380.	IDA	Process
GO:0071277	cellular response to calcium ion	-	ISO	Process
GO:0071300	cellular response to retinoic acid	-	ISO	Process
GO:1903142	positive regulation of establishment of endothelial barrier	21873635.	IBA	Process
GO:1903142	positive regulation of establishment of endothelial barrier	25978380.	IMP	Process
GO:1903142	positive regulation of establishment of endothelial barrier	-	ISO	Process
GO:1903393	positive regulation of adherens junction organization	21873635.	IBA	Process
GO:1903393	positive regulation of adherens junction organization	25978380.	IMP	Process
GO:1903393	positive regulation of adherens junction organization	-	ISO	Process