EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000029404 (Gene tree)
Gene ID: 65105
Gene Symbol: Arl6ip4
Alias: Aip-4|Srp25
Full Name: ADP-ribosylation factor-like 6 interacting protein 4
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 2108 bases
Position: chr5:124116089-124118196
Accession: 1929500
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000031351	SR-25	PF10500.9	3.1e-100	1	1
ENSMUSP00000122377	SR-25	PF10500.9	3e-90	1	1
ENSMUSP00000112506	SR-25	PF10500.9	3.9e-87	1	1
ENSMUSP00000116269	SR-25	PF10500.9	1.7e-13	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000122394	-	982	-	ENSMUSP00000112506	200 (aa)	-	D3YWC2
ENSMUST00000149835	-	462	-	ENSMUSP00000116269	98 (aa)	-	D3Z668
ENSMUST00000145667	-	753	-	ENSMUSP00000122377	226 (aa)	-	D3Z6F1
ENSMUST00000196401	-	294	-	ENSMUSP00000142496	60 (aa)	-	A0A0G2JDT7
ENSMUST00000031351	-	1192	-	ENSMUSP00000031351	229 (aa)	-	Q9JM93

Gene Model

Click here to download ENSMUSG00000029404's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000029404's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000029404	Arl6ip4	86	79.703	ENSG00000182196	ARL6IP4	91	79.147	Homo_sapiens
ENSMUSG00000029404	Arl6ip4	90	66.055	ENSAMEG00000015055	-	74	65.596	Ailuropoda_melanoleuca
ENSMUSG00000029404	Arl6ip4	86	80.000	ENSANAG00000035845	ARL6IP4	91	79.426	Aotus_nancymaae
ENSMUSG00000029404	Arl6ip4	86	84.653	ENSBTAG00000001594	ARL6IP4	91	83.886	Bos_taurus
ENSMUSG00000029404	Arl6ip4	86	75.758	ENSCJAG00000016476	-	91	76.329	Callithrix_jacchus
ENSMUSG00000029404	Arl6ip4	90	74.057	ENSCAFG00000007665	ARL6IP4	91	80.569	Canis_familiaris
ENSMUSG00000029404	Arl6ip4	90	73.460	ENSCAFG00020016288	-	91	80.000	Canis_lupus_dingo
ENSMUSG00000029404	Arl6ip4	86	80.198	ENSCHIG00000014369	-	91	79.621	Capra_hircus
ENSMUSG00000029404	Arl6ip4	86	80.693	ENSTSYG00000030992	ARL6IP4	91	80.095	Carlito_syrichta
ENSMUSG00000029404	Arl6ip4	54	88.889	ENSCAPG00000015583	-	67	88.073	Cavia_aperea
ENSMUSG00000029404	Arl6ip4	90	76.777	ENSCPOG00000031539	-	91	76.777	Cavia_porcellus
ENSMUSG00000029404	Arl6ip4	86	78.500	ENSCCAG00000037235	ARL6IP4	90	77.990	Cebus_capucinus
ENSMUSG00000029404	Arl6ip4	83	80.928	ENSCATG00000000284	-	50	79.048	Cercocebus_atys
ENSMUSG00000029404	Arl6ip4	81	82.540	ENSCATG00000004525	-	91	78.199	Cercocebus_atys
ENSMUSG00000029404	Arl6ip4	53	83.019	ENSCLAG00000008050	-	62	84.906	Chinchilla_lanigera
ENSMUSG00000029404	Arl6ip4	81	78.142	ENSCSAG00000002076	ARL6IP4	59	71.495	Chlorocebus_sabaeus
ENSMUSG00000029404	Arl6ip4	81	81.383	ENSCANG00000008517	ARL6IP4	57	75.342	Colobus_angolensis_palliatus
ENSMUSG00000029404	Arl6ip4	95	83.598	ENSCGRG00001024174	Arl6ip4	90	85.437	Cricetulus_griseus_chok1gshd
ENSMUSG00000029404	Arl6ip4	95	83.598	ENSCGRG00000002843	Arl6ip4	90	85.437	Cricetulus_griseus_crigri
ENSMUSG00000029404	Arl6ip4	81	79.255	ENSDNOG00000044908	-	94	81.481	Dasypus_novemcinctus
ENSMUSG00000029404	Arl6ip4	54	95.327	ENSDORG00000023896	Arl6ip4	99	82.386	Dipodomys_ordii
ENSMUSG00000029404	Arl6ip4	77	81.667	ENSETEG00000008410	ARL6IP4	63	76.526	Echinops_telfairi
ENSMUSG00000029404	Arl6ip4	100	79.399	ENSEASG00005012544	-	91	79.524	Equus_asinus_asinus
ENSMUSG00000029404	Arl6ip4	100	78.970	ENSECAG00000023197	ARL6IP4	91	79.524	Equus_caballus
ENSMUSG00000029404	Arl6ip4	90	80.095	ENSFCAG00000006132	-	91	80.095	Felis_catus
ENSMUSG00000029404	Arl6ip4	100	78.205	ENSFDAG00000009535	-	100	78.205	Fukomys_damarensis
ENSMUSG00000029404	Arl6ip4	51	55.882	ENSGMOG00000012151	arl6ip4	54	58.763	Gadus_morhua
ENSMUSG00000029404	Arl6ip4	86	77.619	ENSGGOG00000042717	ARL6IP4	51	77.169	Gorilla_gorilla
ENSMUSG00000029404	Arl6ip4	90	79.621	ENSHGLG00000011726	-	91	79.621	Heterocephalus_glaber_female
ENSMUSG00000029404	Arl6ip4	90	79.621	ENSHGLG00100018434	-	91	79.621	Heterocephalus_glaber_male
ENSMUSG00000029404	Arl6ip4	86	80.198	ENSSTOG00000010405	-	91	80.095	Ictidomys_tridecemlineatus
ENSMUSG00000029404	Arl6ip4	98	82.051	ENSJJAG00000019114	Arl6ip4	90	83.981	Jaculus_jaculus
ENSMUSG00000029404	Arl6ip4	90	79.245	ENSLAFG00000005314	-	91	79.621	Loxodonta_africana
ENSMUSG00000029404	Arl6ip4	92	71.628	ENSMFAG00000034524	ARL6IP4	62	73.303	Macaca_fascicularis
ENSMUSG00000029404	Arl6ip4	81	81.283	ENSMMUG00000015930	ARL6IP4	86	81.818	Macaca_mulatta
ENSMUSG00000029404	Arl6ip4	83	80.412	ENSMNEG00000015953	ARL6IP4	91	78.095	Macaca_nemestrina
ENSMUSG00000029404	Arl6ip4	52	84.466	ENSMGAG00000003506	ARL6IP4	55	84.466	Meleagris_gallopavo
ENSMUSG00000029404	Arl6ip4	94	82.888	ENSMAUG00000018929	Arl6ip4	90	84.951	Mesocricetus_auratus
ENSMUSG00000029404	Arl6ip4	88	78.155	ENSMICG00000032330	-	90	77.143	Microcebus_murinus
ENSMUSG00000029404	Arl6ip4	87	89.080	ENSMOCG00000001258	Arl6ip4	90	86.408	Microtus_ochrogaster
ENSMUSG00000029404	Arl6ip4	100	97.959	MGP_CAROLIEiJ_G0027744	Arl6ip4	100	97.817	Mus_caroli
ENSMUSG00000029404	Arl6ip4	98	81.726	MGP_PahariEiJ_G0024324	Arl6ip4	98	82.090	Mus_pahari
ENSMUSG00000029404	Arl6ip4	100	100.000	MGP_SPRETEiJ_G0028742	Arl6ip4	100	100.000	Mus_spretus
ENSMUSG00000029404	Arl6ip4	90	81.279	ENSMPUG00000001705	ARL6IP4	75	81.279	Mustela_putorius_furo
ENSMUSG00000029404	Arl6ip4	100	80.786	ENSNGAG00000023492	Arl6ip4	91	84.211	Nannospalax_galili
ENSMUSG00000029404	Arl6ip4	98	66.502	ENSNLEG00000002378	-	91	71.495	Nomascus_leucogenys
ENSMUSG00000029404	Arl6ip4	100	55.000	ENSODEG00000015865	-	52	66.972	Octodon_degus
ENSMUSG00000029404	Arl6ip4	90	75.829	ENSODEG00000010162	-	91	75.829	Octodon_degus
ENSMUSG00000029404	Arl6ip4	52	58.252	ENSORLG00000006213	arl6ip4	92	45.982	Oryzias_latipes
ENSMUSG00000029404	Arl6ip4	52	58.252	ENSORLG00020016925	arl6ip4	50	54.098	Oryzias_latipes_hni
ENSMUSG00000029404	Arl6ip4	52	58.252	ENSORLG00015005448	arl6ip4	92	46.429	Oryzias_latipes_hsok
ENSMUSG00000029404	Arl6ip4	97	69.072	ENSOGAG00000015951	-	73	69.417	Otolemur_garnettii
ENSMUSG00000029404	Arl6ip4	86	76.667	ENSOARG00000007010	ARL6IP4	69	76.256	Ovis_aries
ENSMUSG00000029404	Arl6ip4	86	76.667	ENSPPAG00000028900	ARL6IP4	51	76.256	Pan_paniscus
ENSMUSG00000029404	Arl6ip4	90	80.095	ENSPPRG00000003154	-	91	80.095	Panthera_pardus
ENSMUSG00000029404	Arl6ip4	90	75.117	ENSPTIG00000020573	-	91	76.056	Panthera_tigris_altaica
ENSMUSG00000029404	Arl6ip4	86	77.143	ENSPTRG00000005590	ARL6IP4	51	76.712	Pan_troglodytes
ENSMUSG00000029404	Arl6ip4	83	77.368	ENSPANG00000029614	-	90	74.762	Papio_anubis
ENSMUSG00000029404	Arl6ip4	98	83.077	ENSPEMG00000008921	Arl6ip4	90	86.893	Peromyscus_maniculatus_bairdii
ENSMUSG00000029404	Arl6ip4	52	84.466	ENSPCIG00000003197	-	72	55.959	Phascolarctos_cinereus
ENSMUSG00000029404	Arl6ip4	90	81.159	ENSPCOG00000018734	-	91	81.159	Propithecus_coquereli
ENSMUSG00000029404	Arl6ip4	96	84.536	ENSRNOG00000001080	Arl6ip4	90	89.952	Rattus_norvegicus
ENSMUSG00000029404	Arl6ip4	100	65.236	ENSRROG00000028559	-	81	71.658	Rhinopithecus_roxellana
ENSMUSG00000029404	Arl6ip4	86	81.683	ENSSBOG00000033244	-	91	81.043	Saimiri_boliviensis_boliviensis
ENSMUSG00000029404	Arl6ip4	52	83.495	ENSSHAG00000013731	-	79	63.182	Sarcophilus_harrisii
ENSMUSG00000029404	Arl6ip4	51	56.364	ENSSDUG00000020259	arl6ip4	91	51.613	Seriola_dumerili
ENSMUSG00000029404	Arl6ip4	81	82.353	ENSSSCG00000009782	-	91	76.256	Sus_scrofa
ENSMUSG00000029404	Arl6ip4	85	75.000	ENSTBEG00000000080	ARL6IP4	65	71.163	Tupaia_belangeri
ENSMUSG00000029404	Arl6ip4	90	76.667	ENSUAMG00000000545	-	91	76.667	Ursus_americanus
ENSMUSG00000029404	Arl6ip4	90	76.190	ENSUMAG00000004427	-	91	76.190	Ursus_maritimus
ENSMUSG00000029404	Arl6ip4	90	73.934	ENSVVUG00000028080	-	91	80.476	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005515	protein binding	10508919.	IPI	Function
GO:0005634	nucleus	-	IEA	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0008380	RNA splicing	-	IEA	Process