EuRBPDB

Description

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000202155	-	3707	-	ENSMUSP00000144592	897 (aa)	-	Q9Z1Z0
ENSMUST00000201380	-	3549	-	-	- (aa)	-	-
ENSMUST00000031355	-	3898	XM_006535140	ENSMUSP00000031355	959 (aa)	XP_006535203	Q9Z1Z0
ENSMUST00000202362	-	731	-	-	- (aa)	-	-
ENSMUST00000201642	-	2427	-	ENSMUSP00000144165	74 (aa)	-	A0A0J9YUG0

Gene Model

Protein-Protein Interaction (PPI)

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000029407	Uso1	98	93.184	ENSG00000138768	USO1	97	93.148	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000139	Golgi membrane	-	IEA	Component
GO:0001650	fibrillar center	-	ISO	Component
GO:0005515	protein binding	15800058.23055941.	IPI	Function
GO:0005783	endoplasmic reticulum	21873635.	IBA	Component
GO:0005794	Golgi apparatus	-	ISO	Component
GO:0005795	Golgi stack	21873635.	IBA	Component
GO:0005829	cytosol	15800058.	IDA	Component
GO:0006886	intracellular protein transport	21873635.	IBA	Process
GO:0006886	intracellular protein transport	15800058.	IDA	Process
GO:0006888	ER to Golgi vesicle-mediated transport	21873635.	IBA	Process
GO:0006888	ER to Golgi vesicle-mediated transport	-	ISO	Process
GO:0007030	Golgi organization	23185636.	IMP	Process
GO:0008565	protein transporter activity	21873635.	IBA	Function
GO:0008565	protein transporter activity	15800058.	IDA	Function
GO:0012507	ER to Golgi transport vesicle membrane	21873635.	IBA	Component
GO:0015031	protein transport	-	IEA	Process
GO:0016020	membrane	-	IEA	Component
GO:0016192	vesicle-mediated transport	-	IEA	Process
GO:0045056	transcytosis	21873635.	IBA	Process
GO:0045056	transcytosis	-	ISO	Process
GO:0048211	Golgi vesicle docking	21873635.	IBA	Process
GO:0048280	vesicle fusion with Golgi apparatus	-	IEA	Process
GO:0048471	perinuclear region of cytoplasm	15800058.	IDA	Component
GO:0061025	membrane fusion	21873635.	IBA	Process
GO:0061025	membrane fusion	-	ISO	Process