EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000029430 (Gene tree)
Gene ID: 19384
Gene Symbol: Ran
Alias: -
Full Name: RAN%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 4255
Position: chr5: 129020069-129024323
Accession: 1333112
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000134632	-	229	-	-	- (aa)	-	-
ENSMUST00000111343	-	2423	-	ENSMUSP00000106975	216 (aa)	-	P62827
ENSMUST00000031383	-	2377	XM_006504280	ENSMUSP00000031383	216 (aa)	XP_006504343	P62827

Gene Model

Click here to download ENSMUSG00000029430's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03008	Ribosome biogenesis in eukaryotes	KEGG
mmu03013	RNA transport	KEGG
mmu05166	Human T-cell leukemia virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000029430's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000029430	Ran	90	91.753	WBGene00004302	ran-1	96	89.806	Caenorhabditis_elegans
ENSMUSG00000029430	Ran	99	94.860	ENSDARG00000057026	ran	99	94.860	Danio_rerio
ENSMUSG00000029430	Ran	100	92.593	ENSMUSG00000028287	1700009N14Rik	100	92.593	Mus_musculus
ENSMUSG00000029430	Ran	99	82.629	YLR293C	GSP1	97	82.629	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000055	ribosomal large subunit export from nucleus	-	ISO	Process
GO:0000056	ribosomal small subunit export from nucleus	-	ISO	Process
GO:0000070	mitotic sister chromatid segregation	-	ISO	Process
GO:0000166	nucleotide binding	-	IEA	Function
GO:0000287	magnesium ion binding	-	ISO	Function
GO:0000785	chromatin	-	ISO	Component
GO:0001673	male germ cell nucleus	-	ISO	Component
GO:0002177	manchette	-	ISO	Component
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0003924	GTPase activity	-	ISO	Function
GO:0005515	protein binding	11809816.25946333.	IPI	Function
GO:0005525	GTP binding	-	ISO	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	18347012.25946333.	IDA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005635	nuclear envelope	25946333.	IDA	Component
GO:0005635	nuclear envelope	-	ISO	Component
GO:0005643	nuclear pore	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	18347012.	IDA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005814	centriole	-	ISO	Component
GO:0006606	protein import into nucleus	21873635.	IBA	Process
GO:0006606	protein import into nucleus	11809816.15689618.	IDA	Process
GO:0006606	protein import into nucleus	-	ISO	Process
GO:0006611	protein export from nucleus	-	ISO	Process
GO:0006913	nucleocytoplasmic transport	-	IEA	Process
GO:0007049	cell cycle	-	IEA	Process
GO:0015031	protein transport	-	IEA	Process
GO:0019003	GDP binding	-	ISO	Function
GO:0019904	protein domain specific binding	-	ISO	Function
GO:0030036	actin cytoskeleton organization	21874009.	IMP	Process
GO:0030496	midbody	-	ISO	Component
GO:0032092	positive regulation of protein binding	-	ISO	Process
GO:0032991	protein-containing complex	-	ISO	Component
GO:0034613	cellular protein localization	21874009.	IMP	Process
GO:0034629	cellular protein-containing complex localization	21874009.	IMP	Process
GO:0036126	sperm flagellum	-	ISO	Component
GO:0042307	positive regulation of protein import into nucleus	-	ISO	Process
GO:0042565	RNA nuclear export complex	-	ISO	Component
GO:0043393	regulation of protein binding	-	ISO	Process
GO:0044877	protein-containing complex binding	-	ISO	Function
GO:0045505	dynein intermediate chain binding	-	ISO	Function
GO:0046039	GTP metabolic process	-	ISO	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0046982	protein heterodimerization activity	-	ISO	Function
GO:0051301	cell division	-	IEA	Process
GO:0055037	recycling endosome	-	ISO	Component
GO:0061015	snRNA import into nucleus	-	ISO	Process
GO:0061676	importin-alpha family protein binding	-	ISO	Function
GO:0070883	pre-miRNA binding	-	ISO	Function
GO:1902570	protein localization to nucleolus	-	ISO	Process