EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000029465 (Gene tree)
Gene ID: 56378
Gene Symbol: Arpc3
Alias: 1110006A04Rik|Arp2/3 complex subunit p21-Arc|p21-Ar
Full Name: actin related protein 2/3 complex%2C subunit 3
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 22307
Position: chr5: 122391878-122414184
Accession: 1928375
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000102525	-	899	-	ENSMUSP00000099584	178 (aa)	-	Q9JM76
ENSMUST00000196969	-	599	-	ENSMUSP00000143210	142 (aa)	-	A0A0G2JFK7
ENSMUST00000111716	-	838	-	ENSMUSP00000107345	161 (aa)	-	D3Z2F7
ENSMUST00000126247	-	672	-	-	- (aa)	-	-
ENSMUST00000111713	-	708	-	ENSMUSP00000107342	163 (aa)	-	D3Z2F8
ENSMUST00000031421	-	736	-	ENSMUSP00000031421	170 (aa)	-	H7BWZ3
ENSMUST00000148913	-	856	-	-	- (aa)	-	-
ENSMUST00000141395	-	409	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000029465's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04144	Endocytosis	KEGG
mmu04666	Fc gamma R-mediated phagocytosis	KEGG
mmu04810	Regulation of actin cytoskeleton	KEGG
mmu05100	Bacterial invasion of epithelial cells	KEGG
mmu05132	Salmonella infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000029465's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000029465	Arpc3	97	46.629	YLR370C		100	46.629	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003779	actin binding	-	IEA	Function
GO:0005200	structural constituent of cytoskeleton	-	ISO	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005856	cytoskeleton	-	IEA	Component
GO:0005885	Arp2/3 protein complex	21873635.	IBA	Component
GO:0005885	Arp2/3 protein complex	-	ISO	Component
GO:0005885	Arp2/3 protein complex	12473693.	TAS	Component
GO:0030027	lamellipodium	15294161.	IDA	Component
GO:0030027	lamellipodium	-	ISO	Component
GO:0030833	regulation of actin filament polymerization	-	IEA	Process
GO:0031252	cell leading edge	-	ISO	Component
GO:0031941	filamentous actin	-	ISO	Component
GO:0034314	Arp2/3 complex-mediated actin nucleation	21873635.	IBA	Process
GO:0034314	Arp2/3 complex-mediated actin nucleation	-	ISO	Process
GO:0042995	cell projection	-	IEA	Component
GO:0051015	actin filament binding	21873635.	IBA	Function
GO:0051015	actin filament binding	-	ISO	Function
GO:0061850	growth cone leading edge	-	ISO	Component