EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000029504 (Gene tree)
Gene ID: 69663
Gene Symbol: Ddx51
Alias: 2310061O04Rik
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 51
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 7046 bases
Position: chr5:110653451-110660496
Accession: 1916913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000031478	ResIII	PF04851.15	2.6e-07	1	1
ENSMUSP00000031478	DEAD	PF00270.29	1.5e-40	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
25993413	Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle Progression	IC & MEF	2015	Boucas J	DOI: 10.1371/journal.pone.0125745
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000148773	-	482	-	ENSMUSP00000121481	34 (aa)	-	F6R1R9
ENSMUST00000143087	-	306	-	-	- (aa)	-	-
ENSMUST00000136442	-	540	-	-	- (aa)	-	-
ENSMUST00000136629	-	805	-	-	- (aa)	-	-
ENSMUST00000031478	-	4846	-	ENSMUSP00000031478	639 (aa)	-	Q6P9R1

Gene Model

Click here to download ENSMUSG00000029504's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000029504's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000029504	Ddx51	71	30.573	ENSMUSG00000057788	Ddx49	83	30.573
ENSMUSG00000029504	Ddx51	64	30.900	ENSMUSG00000020677	Ddx52	58	30.900

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000029504	Ddx51	100	74.667	ENSG00000185163	DDX51	100	75.410	Homo_sapiens
ENSMUSG00000029504	Ddx51	54	44.444	ENSAPOG00000013644	ddx51	96	42.778	Acanthochromis_polyacanthus
ENSMUSG00000029504	Ddx51	84	77.180	ENSAMEG00000013674	DDX51	98	77.180	Ailuropoda_melanoleuca
ENSMUSG00000029504	Ddx51	98	52.070	ENSACIG00000010201	ddx51	76	60.123	Amphilophus_citrinellus
ENSMUSG00000029504	Ddx51	99	51.118	ENSAOCG00000017332	ddx51	99	50.830	Amphiprion_ocellaris
ENSMUSG00000029504	Ddx51	99	51.267	ENSAPEG00000004829	ddx51	99	50.980	Amphiprion_percula
ENSMUSG00000029504	Ddx51	99	51.208	ENSATEG00000013470	ddx51	99	51.355	Anabas_testudineus
ENSMUSG00000029504	Ddx51	100	74.415	ENSANAG00000031596	DDX51	100	75.195	Aotus_nancymaae
ENSMUSG00000029504	Ddx51	99	50.765	ENSACLG00000020492	ddx51	99	50.455	Astatotilapia_calliptera
ENSMUSG00000029504	Ddx51	83	55.347	ENSAMXG00000001507	ddx51	97	47.605	Astyanax_mexicanus
ENSMUSG00000029504	Ddx51	100	73.806	ENSBTAG00000017219	DDX51	100	73.765	Bos_taurus
ENSMUSG00000029504	Ddx51	70	31.034	WBGene00022792	ZK686.2	73	31.034	Caenorhabditis_elegans
ENSMUSG00000029504	Ddx51	100	73.810	ENSCJAG00000046414	DDX51	100	74.591	Callithrix_jacchus
ENSMUSG00000029504	Ddx51	100	71.094	ENSCAFG00000006320	DDX51	100	70.963	Canis_familiaris
ENSMUSG00000029504	Ddx51	100	65.419	ENSCAFG00020010492	DDX51	100	65.327	Canis_lupus_dingo
ENSMUSG00000029504	Ddx51	100	75.000	ENSCHIG00000014268	DDX51	100	75.739	Capra_hircus
ENSMUSG00000029504	Ddx51	77	84.444	ENSTSYG00000034346	DDX51	83	84.444	Carlito_syrichta
ENSMUSG00000029504	Ddx51	100	75.311	ENSCPOG00000023923	DDX51	100	75.659	Cavia_porcellus
ENSMUSG00000029504	Ddx51	100	78.086	ENSCCAG00000031005	DDX51	100	78.086	Cebus_capucinus
ENSMUSG00000029504	Ddx51	100	74.359	ENSCATG00000034250	DDX51	100	75.113	Cercocebus_atys
ENSMUSG00000029504	Ddx51	100	74.405	ENSCSAG00000001868	DDX51	100	75.298	Chlorocebus_sabaeus
ENSMUSG00000029504	Ddx51	89	60.832	ENSCPBG00000001164	DDX51	78	61.296	Chrysemys_picta_bellii
ENSMUSG00000029504	Ddx51	82	39.060	ENSCING00000000770	-	99	41.895	Ciona_intestinalis
ENSMUSG00000029504	Ddx51	78	43.222	ENSCSAVG00000010817	-	99	37.481	Ciona_savignyi
ENSMUSG00000029504	Ddx51	100	75.152	ENSCANG00000032770	DDX51	100	75.495	Colobus_angolensis_palliatus
ENSMUSG00000029504	Ddx51	100	86.583	ENSCGRG00001007401	Ddx51	100	87.676	Cricetulus_griseus_chok1gshd
ENSMUSG00000029504	Ddx51	87	90.450	ENSCGRG00000005173	Ddx51	100	90.450	Cricetulus_griseus_crigri
ENSMUSG00000029504	Ddx51	99	49.923	ENSCSEG00000015970	ddx51	99	50.000	Cynoglossus_semilaevis
ENSMUSG00000029504	Ddx51	55	60.432	ENSCVAG00000017562	ddx51	85	60.432	Cyprinodon_variegatus
ENSMUSG00000029504	Ddx51	99	49.775	ENSDARG00000025854	ddx51	99	50.983	Danio_rerio
ENSMUSG00000029504	Ddx51	77	79.074	ENSDNOG00000014194	DDX51	99	79.074	Dasypus_novemcinctus
ENSMUSG00000029504	Ddx51	85	41.187	FBgn0004556	Dbp73D	80	41.187	Drosophila_melanogaster
ENSMUSG00000029504	Ddx51	79	50.888	ENSEBUG00000016425	ddx51	90	50.888	Eptatretus_burgeri
ENSMUSG00000029504	Ddx51	100	72.590	ENSEASG00005016622	DDX51	100	74.024	Equus_asinus_asinus
ENSMUSG00000029504	Ddx51	86	73.921	ENSECAG00000018910	DDX51	64	73.921	Equus_caballus
ENSMUSG00000029504	Ddx51	99	48.830	ENSELUG00000018602	ddx51	74	59.091	Esox_lucius
ENSMUSG00000029504	Ddx51	100	73.261	ENSFCAG00000010782	DDX51	100	73.261	Felis_catus
ENSMUSG00000029504	Ddx51	95	55.891	ENSFALG00000007216	DDX51	75	63.636	Ficedula_albicollis
ENSMUSG00000029504	Ddx51	71	84.768	ENSFDAG00000013231	DDX51	87	84.768	Fukomys_damarensis
ENSMUSG00000029504	Ddx51	71	60.352	ENSFHEG00000008807	ddx51	74	60.352	Fundulus_heteroclitus
ENSMUSG00000029504	Ddx51	78	54.418	ENSGMOG00000012614	ddx51	100	48.095	Gadus_morhua
ENSMUSG00000029504	Ddx51	87	61.400	ENSGALG00000032690	DDX51	93	61.307	Gallus_gallus
ENSMUSG00000029504	Ddx51	86	52.632	ENSGAFG00000019988	ddx51	86	51.127	Gambusia_affinis
ENSMUSG00000029504	Ddx51	99	50.153	ENSGACG00000012252	ddx51	99	50.302	Gasterosteus_aculeatus
ENSMUSG00000029504	Ddx51	100	52.653	ENSGAGG00000009833	DDX51	71	66.537	Gopherus_agassizii
ENSMUSG00000029504	Ddx51	100	74.884	ENSGGOG00000010250	DDX51	100	76.087	Gorilla_gorilla
ENSMUSG00000029504	Ddx51	99	49.616	ENSHBUG00000007532	ddx51	99	49.315	Haplochromis_burtoni
ENSMUSG00000029504	Ddx51	100	74.015	ENSHGLG00000009892	DDX51	100	73.907	Heterocephalus_glaber_female
ENSMUSG00000029504	Ddx51	99	48.353	ENSHCOG00000016131	ddx51	76	56.385	Hippocampus_comes
ENSMUSG00000029504	Ddx51	99	50.299	ENSIPUG00000009240	ddx51	99	50.525	Ictalurus_punctatus
ENSMUSG00000029504	Ddx51	85	83.395	ENSSTOG00000023762	DDX51	94	80.844	Ictidomys_tridecemlineatus
ENSMUSG00000029504	Ddx51	79	57.874	ENSKMAG00000019797	ddx51	99	49.696	Kryptolebias_marmoratus
ENSMUSG00000029504	Ddx51	99	51.740	ENSLBEG00000025627	ddx51	99	51.437	Labrus_bergylta
ENSMUSG00000029504	Ddx51	99	49.784	ENSLACG00000011076	DDX51	99	50.361	Latimeria_chalumnae
ENSMUSG00000029504	Ddx51	99	47.536	ENSLOCG00000006858	ddx51	82	52.900	Lepisosteus_oculatus
ENSMUSG00000029504	Ddx51	90	74.787	ENSLAFG00000008274	DDX51	98	75.436	Loxodonta_africana
ENSMUSG00000029504	Ddx51	100	73.842	ENSMFAG00000031189	DDX51	100	74.589	Macaca_fascicularis
ENSMUSG00000029504	Ddx51	100	73.692	ENSMNEG00000032293	DDX51	100	74.439	Macaca_nemestrina
ENSMUSG00000029504	Ddx51	99	50.446	ENSMAMG00000001462	ddx51	99	49.851	Mastacembelus_armatus
ENSMUSG00000029504	Ddx51	99	50.612	ENSMZEG00005012591	ddx51	99	50.303	Maylandia_zebra
ENSMUSG00000029504	Ddx51	86	62.976	ENSMGAG00000007549	DDX51	99	62.167	Meleagris_gallopavo
ENSMUSG00000029504	Ddx51	100	86.115	ENSMAUG00000012100	Ddx51	100	85.959	Mesocricetus_auratus
ENSMUSG00000029504	Ddx51	100	74.000	ENSMICG00000037047	DDX51	100	73.077	Microcebus_murinus
ENSMUSG00000029504	Ddx51	77	79.559	ENSMOCG00000011638	-	97	78.557	Microtus_ochrogaster
ENSMUSG00000029504	Ddx51	97	75.633	ENSMOCG00000021818	-	93	75.633	Microtus_ochrogaster
ENSMUSG00000029504	Ddx51	93	64.263	ENSMODG00000015355	DDX51	98	63.810	Monodelphis_domestica
ENSMUSG00000029504	Ddx51	99	50.679	ENSMALG00000013852	ddx51	99	50.898	Monopterus_albus
ENSMUSG00000029504	Ddx51	100	98.279	MGP_CAROLIEiJ_G0027549	Ddx51	100	98.279	Mus_caroli
ENSMUSG00000029504	Ddx51	100	95.794	MGP_PahariEiJ_G0024131	Ddx51	100	95.794	Mus_pahari
ENSMUSG00000029504	Ddx51	100	99.218	MGP_SPRETEiJ_G0028547	Ddx51	100	99.218	Mus_spretus
ENSMUSG00000029504	Ddx51	77	78.702	ENSMPUG00000002384	DDX51	99	78.702	Mustela_putorius_furo
ENSMUSG00000029504	Ddx51	77	72.782	ENSMLUG00000029430	DDX51	100	72.782	Myotis_lucifugus
ENSMUSG00000029504	Ddx51	99	81.026	ENSNGAG00000020870	Ddx51	99	80.404	Nannospalax_galili
ENSMUSG00000029504	Ddx51	99	50.917	ENSNBRG00000013764	ddx51	99	50.612	Neolamprologus_brichardi
ENSMUSG00000029504	Ddx51	85	78.245	ENSNLEG00000008548	-	96	78.102	Nomascus_leucogenys
ENSMUSG00000029504	Ddx51	76	75.103	ENSMEUG00000004004	DDX51	83	75.103	Notamacropus_eugenii
ENSMUSG00000029504	Ddx51	84	80.222	ENSODEG00000009622	DDX51	99	78.686	Octodon_degus
ENSMUSG00000029504	Ddx51	99	49.040	ENSONIG00000001627	ddx51	75	58.566	Oreochromis_niloticus
ENSMUSG00000029504	Ddx51	96	61.852	ENSOANG00000012187	DDX51	97	62.009	Ornithorhynchus_anatinus
ENSMUSG00000029504	Ddx51	77	81.010	ENSOCUG00000024699	DDX51	99	81.010	Oryctolagus_cuniculus
ENSMUSG00000029504	Ddx51	99	51.318	ENSORLG00000017814	ddx51	99	51.969	Oryzias_latipes
ENSMUSG00000029504	Ddx51	99	51.087	ENSORLG00020016405	ddx51	99	51.735	Oryzias_latipes_hni
ENSMUSG00000029504	Ddx51	99	52.673	ENSORLG00015014512	ddx51	99	52.276	Oryzias_latipes_hsok
ENSMUSG00000029504	Ddx51	99	50.842	ENSOMEG00000001919	ddx51	99	52.262	Oryzias_melastigma
ENSMUSG00000029504	Ddx51	100	71.214	ENSOGAG00000030755	DDX51	100	71.833	Otolemur_garnettii
ENSMUSG00000029504	Ddx51	100	74.387	ENSOARG00000011942	DDX51	100	74.501	Ovis_aries
ENSMUSG00000029504	Ddx51	82	82.027	ENSPPAG00000028768	DDX51	81	82.027	Pan_paniscus
ENSMUSG00000029504	Ddx51	92	69.764	ENSPPRG00000015010	DDX51	94	69.676	Panthera_pardus
ENSMUSG00000029504	Ddx51	100	76.097	ENSPTRG00000005647	DDX51	100	76.865	Pan_troglodytes
ENSMUSG00000029504	Ddx51	100	74.057	ENSPANG00000008107	DDX51	100	74.811	Papio_anubis
ENSMUSG00000029504	Ddx51	97	52.269	ENSPKIG00000022075	ddx51	95	51.577	Paramormyrops_kingsleyae
ENSMUSG00000029504	Ddx51	74	66.458	ENSPSIG00000003736	DDX51	94	66.458	Pelodiscus_sinensis
ENSMUSG00000029504	Ddx51	56	43.523	ENSPMGG00000018683	ddx51	60	58.228	Periophthalmus_magnuspinnatus
ENSMUSG00000029504	Ddx51	96	59.434	ENSPCIG00000005052	DDX51	72	71.458	Phascolarctos_cinereus
ENSMUSG00000029504	Ddx51	79	57.058	ENSPFOG00000008508	ddx51	99	47.748	Poecilia_formosa
ENSMUSG00000029504	Ddx51	84	54.360	ENSPLAG00000023669	ddx51	88	51.613	Poecilia_latipinna
ENSMUSG00000029504	Ddx51	79	57.058	ENSPMEG00000011299	ddx51	99	47.748	Poecilia_mexicana
ENSMUSG00000029504	Ddx51	79	57.624	ENSPREG00000015992	ddx51	99	48.628	Poecilia_reticulata
ENSMUSG00000029504	Ddx51	100	75.643	ENSPPYG00000005135	DDX51	100	76.408	Pongo_abelii
ENSMUSG00000029504	Ddx51	85	73.663	ENSPCAG00000009747	DDX51	87	73.663	Procavia_capensis
ENSMUSG00000029504	Ddx51	100	73.534	ENSPCOG00000019597	DDX51	100	72.632	Propithecus_coquereli
ENSMUSG00000029504	Ddx51	99	73.668	ENSPVAG00000000454	DDX51	100	74.451	Pteropus_vampyrus
ENSMUSG00000029504	Ddx51	84	56.742	ENSPNAG00000017430	ddx51	99	48.316	Pygocentrus_nattereri
ENSMUSG00000029504	Ddx51	100	90.923	ENSRNOG00000037480	Ddx51	100	90.767	Rattus_norvegicus
ENSMUSG00000029504	Ddx51	100	72.866	ENSRROG00000029937	DDX51	100	73.973	Rhinopithecus_roxellana
ENSMUSG00000029504	Ddx51	77	30.326	YNR038W	-	64	32.135	Saccharomyces_cerevisiae
ENSMUSG00000029504	Ddx51	85	82.037	ENSSBOG00000018712	DDX51	91	82.037	Saimiri_boliviensis_boliviensis
ENSMUSG00000029504	Ddx51	96	62.423	ENSSHAG00000011696	DDX51	81	68.496	Sarcophilus_harrisii
ENSMUSG00000029504	Ddx51	99	48.641	ENSSFOG00015002636	ddx51	99	52.251	Scleropages_formosus
ENSMUSG00000029504	Ddx51	99	51.048	ENSSMAG00000018065	ddx51	99	50.375	Scophthalmus_maximus
ENSMUSG00000029504	Ddx51	89	55.654	ENSSDUG00000001495	ddx51	99	50.599	Seriola_dumerili
ENSMUSG00000029504	Ddx51	88	55.773	ENSSLDG00000006541	ddx51	96	50.827	Seriola_lalandi_dorsalis
ENSMUSG00000029504	Ddx51	92	58.059	ENSSPUG00000015618	DDX51	88	61.400	Sphenodon_punctatus
ENSMUSG00000029504	Ddx51	99	50.370	ENSSPAG00000019759	ddx51	100	50.370	Stegastes_partitus
ENSMUSG00000029504	Ddx51	91	76.150	ENSSSCG00000028735	DDX51	100	73.466	Sus_scrofa
ENSMUSG00000029504	Ddx51	77	65.440	ENSTGUG00000010243	DDX51	100	65.440	Taeniopygia_guttata
ENSMUSG00000029504	Ddx51	99	50.076	ENSTRUG00000012670	ddx51	99	50.228	Takifugu_rubripes
ENSMUSG00000029504	Ddx51	99	48.830	ENSTNIG00000010281	ddx51	99	52.567	Tetraodon_nigroviridis
ENSMUSG00000029504	Ddx51	69	75.621	ENSTBEG00000006060	DDX51	100	75.621	Tupaia_belangeri
ENSMUSG00000029504	Ddx51	100	66.003	ENSTTRG00000000634	DDX51	100	66.462	Tursiops_truncatus
ENSMUSG00000029504	Ddx51	95	69.357	ENSUMAG00000002652	DDX51	84	75.888	Ursus_maritimus
ENSMUSG00000029504	Ddx51	85	74.141	ENSVVUG00000004382	DDX51	99	71.478	Vulpes_vulpes
ENSMUSG00000029504	Ddx51	99	52.018	ENSXETG00000022359	ddx51	99	52.459	Xenopus_tropicalis
ENSMUSG00000029504	Ddx51	89	53.603	ENSXCOG00000003043	ddx51	83	54.809	Xiphophorus_couchianus
ENSMUSG00000029504	Ddx51	89	53.103	ENSXMAG00000010009	ddx51	99	49.319	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0004386	helicase activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0006364	rRNA processing	-	IEA	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0042254	ribosome biogenesis	-	IEA	Process