EuRBPDB

Description

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000031524	-	1870	-	ENSMUSP00000031524	412 (aa)	-	Q07417
ENSMUST00000141142	-	645	-	-	- (aa)	-	-
ENSMUST00000131726	-	2023	-	-	- (aa)	-	-
ENSMUST00000153374	-	532	-	-	- (aa)	-	-

Gene Model

Pathways

Pathway ID	Pathway Name	Source
mmu00071	Fatty acid degradation	KEGG
mmu00280	Valine, leucine and isoleucine degradation	KEGG
mmu00650	Butanoate metabolism	KEGG
mmu01100	Metabolic pathways	KEGG
mmu01200	Carbon metabolism	KEGG
mmu01212	Fatty acid metabolism	KEGG

Protein-Protein Interaction (PPI)

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000062	fatty-acyl-CoA binding	-	ISO	Function
GO:0003995	acyl-CoA dehydrogenase activity	-	ISO	Function
GO:0004085	butyryl-CoA dehydrogenase activity	21873635.	IBA	Function
GO:0004085	butyryl-CoA dehydrogenase activity	-	ISO	Function
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005739	mitochondrion	14651853.18614015.	HDA	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005759	mitochondrial matrix	-	ISO	Component
GO:0006629	lipid metabolic process	-	IEA	Process
GO:0006631	fatty acid metabolic process	-	IEA	Process
GO:0016491	oxidoreductase activity	-	IEA	Function
GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	-	IEA	Function
GO:0031966	mitochondrial membrane	-	ISO	Component
GO:0033539	fatty acid beta-oxidation using acyl-CoA dehydrogenase	-	ISO	Process
GO:0046359	butyrate catabolic process	21873635.	IBA	Process
GO:0046359	butyrate catabolic process	-	ISO	Process
GO:0050660	flavin adenine dinucleotide binding	-	ISO	Function
GO:0051289	protein homotetramerization	-	ISO	Process
GO:0055114	oxidation-reduction process	-	IEA	Process