EuRBPDB

Description

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000129747	-	276	-	-	- (aa)	-	-
ENSMUST00000199237	-	1603	-	-	- (aa)	-	-
ENSMUST00000128579	-	399	-	-	- (aa)	-	-
ENSMUST00000110829	-	2547	-	ENSMUSP00000106453	514 (aa)	-	Q9WTX8
ENSMUST00000031534	-	2640	XM_006504651	ENSMUSP00000031534	717 (aa)	XP_006504714	Q9WTX8
ENSMUST00000132832	-	706	-	-	- (aa)	-	-

Gene Model

Pathways

Pathway ID	Pathway Name	Source
mmu04110	Cell cycle	KEGG
mmu04114	Oocyte meiosis	KEGG
mmu04914	Progesterone-mediated oocyte maturation	KEGG
mmu05166	Human T-cell leukemia virus 1 infection	KEGG
mmu05203	Viral carcinogenesis	KEGG

Protein-Protein Interaction (PPI)

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000775	chromosome, centromeric region	-	IEA	Component
GO:0000776	kinetochore	21873635.	IBA	Component
GO:0000776	kinetochore	17504913.17938250.21558374.	IDA	Component
GO:0000776	kinetochore	-	ISO	Component
GO:0000776	kinetochore	-	ISO	Component
GO:0000922	spindle pole	17504913.	IDA	Component
GO:0005634	nucleus	-	IEA	Component
GO:0005635	nuclear envelope	21873635.	IBA	Component
GO:0005635	nuclear envelope	-	ISO	Component
GO:0005694	chromosome	-	IEA	Component
GO:0005737	cytoplasm	17504913.	IDA	Component
GO:0005856	cytoskeleton	-	IEA	Component
GO:0007049	cell cycle	-	IEA	Process
GO:0007094	mitotic spindle assembly checkpoint	21873635.	IBA	Process
GO:0007094	mitotic spindle assembly checkpoint	-	ISO	Process
GO:0042130	negative regulation of T cell proliferation	11313860.	IDA	Process
GO:0042802	identical protein binding	-	ISO	Function
GO:0043515	kinetochore binding	-	ISO	Function
GO:0044615	nuclear pore nuclear basket	-	ISO	Component
GO:0048538	thymus development	11313860.	IDA	Process
GO:0051301	cell division	-	IEA	Process
GO:0051315	attachment of mitotic spindle microtubules to kinetochore	21873635.	IBA	Process
GO:0072686	mitotic spindle	21873635.	IBA	Component
GO:0072686	mitotic spindle	-	ISO	Component
GO:0090235	regulation of metaphase plate congression	-	ISO	Process
GO:0097431	mitotic spindle pole	-	ISO	Component
GO:1901990	regulation of mitotic cell cycle phase transition	11313860.	IDA	Process