EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000029622 (Gene tree)
Gene ID: 11867
Gene Symbol: Arpc1b
Alias: L72|SOP2Hs|p41-ARC
Full Name: actin related protein 2/3 complex%2C subunit 1B
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 16491
Position: chr5: 145114215-145130705
Accession: 1343142
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000141602	-	295	-	ENSMUSP00000122340	56 (aa)	-	D3Z6S0
ENSMUST00000138235	-	850	-	-	- (aa)	-	-
ENSMUST00000126343	-	916	-	-	- (aa)	-	-
ENSMUST00000085679	-	3105	-	ENSMUSP00000082822	372 (aa)	-	Q9WV32
ENSMUST00000138900	-	914	-	-	- (aa)	-	-
ENSMUST00000144375	-	772	-	-	- (aa)	-	-
ENSMUST00000196111	-	1394	-	ENSMUSP00000143438	376 (aa)	-	Q91Z25
ENSMUST00000138922	-	525	-	ENSMUSP00000115515	105 (aa)	-	F6THG2
ENSMUST00000128229	-	680	-	-	- (aa)	-	-
ENSMUST00000136074	-	696	-	ENSMUSP00000115022	232 (aa)	-	F6VVE6
ENSMUST00000129033	-	431	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000029622's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04144	Endocytosis	KEGG
mmu04666	Fc gamma R-mediated phagocytosis	KEGG
mmu04810	Regulation of actin cytoskeleton	KEGG
mmu05100	Bacterial invasion of epithelial cells	KEGG
mmu05132	Salmonella infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000029622's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003779	actin binding	-	IEA	Function
GO:0005200	structural constituent of cytoskeleton	-	ISO	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0005856	cytoskeleton	-	IEA	Component
GO:0005885	Arp2/3 protein complex	21873635.	IBA	Component
GO:0005885	Arp2/3 protein complex	-	ISO	Component
GO:0005885	Arp2/3 protein complex	12473693.	TAS	Component
GO:0015629	actin cytoskeleton	-	IEA	Component
GO:0030833	regulation of actin filament polymerization	-	IEA	Process
GO:0034314	Arp2/3 complex-mediated actin nucleation	21873635.	IBA	Process
GO:0034314	Arp2/3 complex-mediated actin nucleation	-	ISO	Process
GO:0036284	tubulobulbar complex	-	ISO	Component
GO:0044877	protein-containing complex binding	-	ISO	Function
GO:0051015	actin filament binding	21873635.	IBA	Function
GO:0051015	actin filament binding	-	ISO	Function