EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000029623 (Gene tree)
Gene ID: 231887
Gene Symbol: Pdap1
Alias: HASPP28|PAP1
Full Name: PDGFA associated protein 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 11470
Position: chr5: 145128769-145140238
Accession: 2448536
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000123111	-	1017	-	-	- (aa)	-	-
ENSMUST00000199218	-	2452	-	-	- (aa)	-	-
ENSMUST00000031627	-	2353	-	ENSMUSP00000031627	181 (aa)	-	Q3UHX2
ENSMUST00000143439	-	676	-	-	- (aa)	-	-
ENSMUST00000148781	-	448	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000029623's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000029623's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000029623	Pdap1	100	96.685	ENSG00000106244	PDAP1	100	96.685	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005615	extracellular space	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0048008	platelet-derived growth factor receptor signaling pathway	-	ISO	Process
GO:0048407	platelet-derived growth factor binding	-	ISO	Function