EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000029657 (Gene tree)
Gene ID: 15505
Gene Symbol: Hsph1
Alias: HSP110|Hsp105|hsp-E7I|hsp110/105
Full Name: heat shock 105kDa/110kDa protein 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 22090
Position: chr5: 149614287-149636376
Accession: 105053
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000201666	-	254	-	-	- (aa)	-	-
ENSMUST00000201452	-	3140	-	ENSMUSP00000144654	858 (aa)	-	Q61699
ENSMUST00000200825	-	416	-	ENSMUSP00000143913	100 (aa)	-	D3Z027
ENSMUST00000200805	-	587	-	ENSMUSP00000143925	94 (aa)	-	A0A0J9YTZ7
ENSMUST00000201559	-	661	-	ENSMUSP00000144043	144 (aa)	-	D3Z3I9
ENSMUST00000201877	-	751	-	-	- (aa)	-	-
ENSMUST00000074846	-	3240	XM_006504914	ENSMUSP00000074392	814 (aa)	XP_006504977	Q61699
ENSMUST00000202361	-	3802	XM_006504915	ENSMUSP00000144413	858 (aa)	XP_006504978	Q61699
ENSMUST00000201431	-	4764	-	-	- (aa)	-	-
ENSMUST00000202089	-	3054	-	ENSMUSP00000144297	817 (aa)	-	E9Q0U7
ENSMUST00000202137	-	752	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000029657's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04141	Protein processing in endoplasmic reticulum	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000029657's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000029657	Hsph1	100	98.000	ENSG00000120694	HSPH1	100	93.497	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0000774	adenyl-nucleotide exchange factor activity	-	ISO	Function
GO:0005515	protein binding	14644449.	IPI	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005576	extracellular region	12952910.	TAS	Component
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	17643418.19028714.19754877.	IDA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	17643418.	IDA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005874	microtubule	12749852.	IDA	Component
GO:0006986	response to unfolded protein	9931472.	TAS	Process
GO:0032991	protein-containing complex	-	ISO	Component
GO:0043014	alpha-tubulin binding	12749852.	IDA	Function
GO:0043524	negative regulation of neuron apoptotic process	12749852.	TAS	Process
GO:0045345	positive regulation of MHC class I biosynthetic process	12952910.	TAS	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	19028714.19754877.	IDA	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	19754877.	IGI	Process
GO:0051085	chaperone cofactor-dependent protein refolding	14644449.	IDA	Process
GO:0051135	positive regulation of NK T cell activation	12952910.	TAS	Process
GO:0061098	positive regulation of protein tyrosine kinase activity	19754877.	IDA	Process
GO:0070507	regulation of microtubule cytoskeleton organization	12749852.	NAS	Process
GO:1903748	negative regulation of establishment of protein localization to mitochondrion	16857185.	IMP	Process
GO:1903751	negative regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide	18681888.	IMP	Process
GO:1903753	negative regulation of p38MAPK cascade	18681888.	IGI	Process
GO:2001234	negative regulation of apoptotic signaling pathway	16857185.	IMP	Process