EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000029882 (Gene tree)
Gene ID: 67373
Gene Symbol: 2210010C04Rik
Alias: -
Full Name: RIKEN cDNA 2210010C04 gene
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 5242
Position: chr6: 41030268-41035509
Accession: 1914623
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
25993413	Label-Free Protein RNA Interactome Analysis Identifies Khsrp Signaling Downstream of the p38/Mk2 Kinase Complex as a Critical Modulator of Cell Cycle Progression	IC & MEF	2015	Boucas J	DOI: 10.1371/journal.pone.0125745
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000031931	-	2142	-	ENSMUSP00000031931	247 (aa)	-	Q9CPN9

Gene Model

Click here to download ENSMUSG00000029882's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04080	Neuroactive ligand-receptor interaction	KEGG
mmu04972	Pancreatic secretion	KEGG
mmu04974	Protein digestion and absorption	KEGG
mmu05164	Influenza A	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000029882's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000029882	2210010C04Rik	100	77.733	ENSMUSG00000071521	Try10	100	77.733	Mus_musculus
ENSMUSG00000029882	2210010C04Rik	100	75.304	ENSMUSG00000071519	Prss3	100	75.304	Mus_musculus
ENSMUSG00000029882	2210010C04Rik	100	75.000	ENSMUSG00000096525	Gm2663	100	75.000	Mus_musculus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004252	serine-type endopeptidase activity	21873635.	IBA	Function
GO:0005615	extracellular space	21873635.	IBA	Component
GO:0006508	proteolysis	21873635.	IBA	Process