EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000029913 (Gene tree)
Gene ID
70779
Gene Symbol
Prdm5
Alias
4432417F03Rik|6530401I24Rik|E130112L17Rik|PFM2
Full Name
PR domain containing 5
Gene Type
protein_coding
Species
Mus_musculus
Status
putative
Strand
Plus strand
Length
158023 bases
Position
chr6:65778988-65937010
Accession
1918029
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000031976zf-C2H2PF00096.261.3e-5819
ENSMUSP00000031976zf-C2H2PF00096.261.3e-5829
ENSMUSP00000031976zf-C2H2PF00096.261.3e-5839
ENSMUSP00000031976zf-C2H2PF00096.261.3e-5849
ENSMUSP00000031976zf-C2H2PF00096.261.3e-5859
ENSMUSP00000031976zf-C2H2PF00096.261.3e-5869
ENSMUSP00000031976zf-C2H2PF00096.261.3e-5879
ENSMUSP00000031976zf-C2H2PF00096.261.3e-5889
ENSMUSP00000031976zf-C2H2PF00096.261.3e-5899
ENSMUSP00000031973zf-C2H2PF00096.261.3e-4819
ENSMUSP00000031973zf-C2H2PF00096.261.3e-4829
ENSMUSP00000031973zf-C2H2PF00096.261.3e-4839
ENSMUSP00000031973zf-C2H2PF00096.261.3e-4849
ENSMUSP00000031973zf-C2H2PF00096.261.3e-4859
ENSMUSP00000031973zf-C2H2PF00096.261.3e-4869
ENSMUSP00000031973zf-C2H2PF00096.261.3e-4879
ENSMUSP00000031973zf-C2H2PF00096.261.3e-4889
ENSMUSP00000031973zf-C2H2PF00096.261.3e-4899
ENSMUSP00000133423zf-C2H2PF00096.263.1e-4115
ENSMUSP00000133423zf-C2H2PF00096.263.1e-4125
ENSMUSP00000133423zf-C2H2PF00096.263.1e-4135
ENSMUSP00000133423zf-C2H2PF00096.263.1e-4145
ENSMUSP00000133423zf-C2H2PF00096.263.1e-4155
ENSMUSP00000079979zf-C2H2PF00096.261e-2615
ENSMUSP00000079979zf-C2H2PF00096.261e-2625
ENSMUSP00000079979zf-C2H2PF00096.261e-2635
ENSMUSP00000079979zf-C2H2PF00096.261e-2645
ENSMUSP00000079979zf-C2H2PF00096.261e-2655
ENSMUSP00000133423zf-metPF12874.78.8e-2213
ENSMUSP00000133423zf-metPF12874.78.8e-2223
ENSMUSP00000133423zf-metPF12874.78.8e-2233
ENSMUSP00000031976zf-metPF12874.73.4e-2013
ENSMUSP00000031976zf-metPF12874.73.4e-2023
ENSMUSP00000031976zf-metPF12874.73.4e-2033
ENSMUSP00000031973zf-metPF12874.71.1e-1613
ENSMUSP00000031973zf-metPF12874.71.1e-1623
ENSMUSP00000031973zf-metPF12874.71.1e-1633
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000031973-1488XM_006506601ENSMUSP00000031973415 (aa)XP_006506664E9Q707
ENSMUST00000205168-4168--- (aa)--
ENSMUST00000031976-2155XM_006506604ENSMUSP00000031976599 (aa)XP_006506667Q9CXE0
ENSMUST00000205155-1920--- (aa)--
ENSMUST00000173538-1938--- (aa)--
ENSMUST00000081219-984-ENSMUSP00000079979221 (aa)-Q9D1T8
ENSMUST00000172638-1714-ENSMUSP00000133423501 (aa)-G3UWU3
Gene Model
Click here to download ENSMUSG00000029913's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000029913's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000029913Prdm510097.468ENSG00000138738PRDM510097.468Homo_sapiens
ENSMUSG00000029913Prdm510088.000ENSAPOG00000023220prdm510088.000Acanthochromis_polyacanthus
ENSMUSG00000029913Prdm58790.252ENSAMEG00000003050PRDM510090.252Ailuropoda_melanoleuca
ENSMUSG00000029913Prdm510088.000ENSACIG00000000406prdm510088.000Amphilophus_citrinellus
ENSMUSG00000029913Prdm510088.000ENSAOCG00000014806prdm510088.000Amphiprion_ocellaris
ENSMUSG00000029913Prdm59677.893ENSAPEG00000016846prdm59977.686Amphiprion_percula
ENSMUSG00000029913Prdm510088.000ENSATEG00000013829prdm510088.000Anabas_testudineus
ENSMUSG00000029913Prdm59389.241ENSAPLG00000013828PRDM510089.241Anas_platyrhynchos
ENSMUSG00000029913Prdm510090.000ENSACAG00000012999PRDM510090.000Anolis_carolinensis
ENSMUSG00000029913Prdm510097.349ENSANAG00000027411PRDM510097.349Aotus_nancymaae
ENSMUSG00000029913Prdm510088.000ENSACLG00000017996prdm510088.000Astatotilapia_calliptera
ENSMUSG00000029913Prdm58187.025ENSAMXG00000041864prdm59974.296Astyanax_mexicanus
ENSMUSG00000029913Prdm510096.519ENSBTAG00000012111PRDM510096.519Bos_taurus
ENSMUSG00000029913Prdm510097.349ENSCJAG00000003133PRDM510097.349Callithrix_jacchus
ENSMUSG00000029913Prdm58797.487ENSCAFG00000004179PRDM59697.487Canis_familiaris
ENSMUSG00000029913Prdm510097.152ENSCAFG00020017685PRDM510097.152Canis_lupus_dingo
ENSMUSG00000029913Prdm510096.203ENSCHIG00000018772PRDM510096.203Capra_hircus
ENSMUSG00000029913Prdm59196.565ENSTSYG00000009630PRDM59596.565Carlito_syrichta
ENSMUSG00000029913Prdm59597.468ENSCAPG00000015217PRDM510097.895Cavia_aperea
ENSMUSG00000029913Prdm59597.468ENSCPOG00000012883PRDM510097.917Cavia_porcellus
ENSMUSG00000029913Prdm510097.590ENSCCAG00000023157PRDM510097.590Cebus_capucinus
ENSMUSG00000029913Prdm510097.831ENSCATG00000042510PRDM510097.831Cercocebus_atys
ENSMUSG00000029913Prdm59597.785ENSCLAG00000005392PRDM510097.917Chinchilla_lanigera
ENSMUSG00000029913Prdm510096.667ENSCSAG00000003729PRDM510097.468Chlorocebus_sabaeus
ENSMUSG00000029913Prdm59996.000ENSCHOG00000007801PRDM58996.000Choloepus_hoffmanni
ENSMUSG00000029913Prdm510090.000ENSCPBG00000024735PRDM510090.000Chrysemys_picta_bellii
ENSMUSG00000029913Prdm510097.831ENSCANG00000036807PRDM510097.831Colobus_angolensis_palliatus
ENSMUSG00000029913Prdm510099.548ENSCGRG00001010581Prdm510099.548Cricetulus_griseus_chok1gshd
ENSMUSG00000029913Prdm58898.667ENSCGRG00000010996-9999.262Cricetulus_griseus_crigri
ENSMUSG00000029913Prdm510087.333ENSCSEG00000019979prdm510087.333Cynoglossus_semilaevis
ENSMUSG00000029913Prdm510088.000ENSCVAG00000013692prdm59988.000Cyprinodon_variegatus
ENSMUSG00000029913Prdm59890.411ENSDARG00000006288prdm59987.179Danio_rerio
ENSMUSG00000029913Prdm58796.215ENSDNOG00000002009PRDM510096.215Dasypus_novemcinctus
ENSMUSG00000029913Prdm510096.203ENSDORG00000007739Prdm510096.203Dipodomys_ordii
ENSMUSG00000029913Prdm59391.304ENSETEG00000020268PRDM59083.465Echinops_telfairi
ENSMUSG00000029913Prdm59990.604ENSEBUG00000004301prdm510090.604Eptatretus_burgeri
ENSMUSG00000029913Prdm510097.349ENSEASG00005018365PRDM510097.349Equus_asinus_asinus
ENSMUSG00000029913Prdm510085.577ENSECAG00000024747-10085.577Equus_caballus
ENSMUSG00000029913Prdm59996.957ENSECAG00000011516PRDM59096.957Equus_caballus
ENSMUSG00000029913Prdm59994.792ENSEEUG00000010306PRDM510094.792Erinaceus_europaeus
ENSMUSG00000029913Prdm59891.803ENSELUG00000005894prdm59387.665Esox_lucius
ENSMUSG00000029913Prdm510096.835ENSFCAG00000025656PRDM510096.835Felis_catus
ENSMUSG00000029913Prdm59969.159ENSFALG00000008381PRDM510069.159Ficedula_albicollis
ENSMUSG00000029913Prdm510098.101ENSFDAG00000021361PRDM510098.101Fukomys_damarensis
ENSMUSG00000029913Prdm59889.726ENSFHEG00000013040prdm59989.726Fundulus_heteroclitus
ENSMUSG00000029913Prdm59791.176ENSGMOG00000012038prdm510091.667Gadus_morhua
ENSMUSG00000029913Prdm510090.000ENSGALG00000011963PRDM510090.000Gallus_gallus
ENSMUSG00000029913Prdm59891.803ENSGAFG00000019233prdm59587.665Gambusia_affinis
ENSMUSG00000029913Prdm59891.803ENSGAGG00000020362PRDM59991.803Gopherus_agassizii
ENSMUSG00000029913Prdm510097.831ENSGGOG00000013562PRDM510097.831Gorilla_gorilla
ENSMUSG00000029913Prdm510088.000ENSHBUG00000023375prdm510088.000Haplochromis_burtoni
ENSMUSG00000029913Prdm59797.980ENSHGLG00000003010PRDM59997.980Heterocephalus_glaber_female
ENSMUSG00000029913Prdm510098.072ENSHGLG00100003696PRDM510098.072Heterocephalus_glaber_male
ENSMUSG00000029913Prdm59988.591ENSHCOG00000012131prdm59988.591Hippocampus_comes
ENSMUSG00000029913Prdm59891.667ENSIPUG00000001248prdm510087.342Ictalurus_punctatus
ENSMUSG00000029913Prdm59593.038ENSSTOG00000004741PRDM59997.059Ictidomys_tridecemlineatus
ENSMUSG00000029913Prdm59798.000ENSJJAG00000011464Prdm510098.000Jaculus_jaculus
ENSMUSG00000029913Prdm510087.333ENSKMAG00000013663prdm510087.333Kryptolebias_marmoratus
ENSMUSG00000029913Prdm510088.000ENSLBEG00000022736prdm510088.000Labrus_bergylta
ENSMUSG00000029913Prdm58789.557ENSLACG00000009187PRDM59989.557Latimeria_chalumnae
ENSMUSG00000029913Prdm59989.933ENSLOCG00000009778prdm59989.933Lepisosteus_oculatus
ENSMUSG00000029913Prdm510095.333ENSLAFG00000006532PRDM510096.835Loxodonta_africana
ENSMUSG00000029913Prdm510097.831ENSMFAG00000045845PRDM510097.831Macaca_fascicularis
ENSMUSG00000029913Prdm510097.831ENSMMUG00000003249PRDM510097.831Macaca_mulatta
ENSMUSG00000029913Prdm510097.831ENSMNEG00000019018PRDM510097.831Macaca_nemestrina
ENSMUSG00000029913Prdm59397.468ENSMLEG00000023145PRDM510097.468Mandrillus_leucophaeus
ENSMUSG00000029913Prdm510087.333ENSMAMG00000013419prdm510087.333Mastacembelus_armatus
ENSMUSG00000029913Prdm510088.000ENSMZEG00005020645prdm510088.000Maylandia_zebra
ENSMUSG00000029913Prdm59388.924ENSMGAG00000010710PRDM510088.924Meleagris_gallopavo
ENSMUSG00000029913Prdm510099.548ENSMAUG00000006768Prdm510099.548Mesocricetus_auratus
ENSMUSG00000029913Prdm510097.333ENSMICG00000001459PRDM510097.333Microcebus_murinus
ENSMUSG00000029913Prdm510099.548ENSMOCG00000016267Prdm510099.548Microtus_ochrogaster
ENSMUSG00000029913Prdm510088.000ENSMMOG00000006035prdm510088.000Mola_mola
ENSMUSG00000029913Prdm510090.000ENSMODG00000018942PRDM510090.000Monodelphis_domestica
ENSMUSG00000029913Prdm510088.000ENSMALG00000013934prdm59988.000Monopterus_albus
ENSMUSG00000029913Prdm5100100.000MGP_CAROLIEiJ_G0028463Prdm5100100.000Mus_caroli
ENSMUSG00000029913Prdm5100100.000MGP_PahariEiJ_G0022203Prdm5100100.000Mus_pahari
ENSMUSG00000029913Prdm5100100.000MGP_SPRETEiJ_G0029467Prdm5100100.000Mus_spretus
ENSMUSG00000029913Prdm510096.519ENSMPUG00000017415PRDM510096.519Mustela_putorius_furo
ENSMUSG00000029913Prdm58789.062ENSMLUG00000006097PRDM510089.062Myotis_lucifugus
ENSMUSG00000029913Prdm510099.548ENSNGAG00000018317Prdm510099.548Nannospalax_galili
ENSMUSG00000029913Prdm59877.143ENSNBRG00000004976prdm510079.560Neolamprologus_brichardi
ENSMUSG00000029913Prdm510097.831ENSNLEG00000009107PRDM510097.831Nomascus_leucogenys
ENSMUSG00000029913Prdm59091.525ENSMEUG00000006576-6796.774Notamacropus_eugenii
ENSMUSG00000029913Prdm59593.536ENSOPRG00000011066-60100.000Ochotona_princeps
ENSMUSG00000029913Prdm59998.101ENSODEG00000009133PRDM510098.101Octodon_degus
ENSMUSG00000029913Prdm510088.000ENSONIG00000003111prdm59987.025Oreochromis_niloticus
ENSMUSG00000029913Prdm57587.778ENSOANG00000006197-10087.778Ornithorhynchus_anatinus
ENSMUSG00000029913Prdm59890.909ENSOANG00000015109PRDM59790.909Ornithorhynchus_anatinus
ENSMUSG00000029913Prdm59083.544ENSOCUG00000013454PRDM510086.076Oryctolagus_cuniculus
ENSMUSG00000029913Prdm510088.000ENSORLG00000016247prdm510088.000Oryzias_latipes
ENSMUSG00000029913Prdm510088.000ENSORLG00020018051prdm510088.000Oryzias_latipes_hni
ENSMUSG00000029913Prdm510088.000ENSORLG00015013760prdm510088.000Oryzias_latipes_hsok
ENSMUSG00000029913Prdm510088.000ENSOMEG00000005143prdm510088.000Oryzias_melastigma
ENSMUSG00000029913Prdm57697.333ENSOGAG00000009996PRDM59397.333Otolemur_garnettii
ENSMUSG00000029913Prdm59196.241ENSOARG00000015473PRDM510097.475Ovis_aries
ENSMUSG00000029913Prdm59397.468ENSPPAG00000043045PRDM510097.710Pan_paniscus
ENSMUSG00000029913Prdm510096.835ENSPPRG00000001020PRDM510096.835Panthera_pardus
ENSMUSG00000029913Prdm59396.835ENSPTIG00000010807PRDM59596.835Panthera_tigris_altaica
ENSMUSG00000029913Prdm510097.831ENSPTRG00000016403PRDM510097.831Pan_troglodytes
ENSMUSG00000029913Prdm510097.831ENSPANG00000023612PRDM510097.831Papio_anubis
ENSMUSG00000029913Prdm510086.441ENSPKIG00000015492prdm59886.441Paramormyrops_kingsleyae
ENSMUSG00000029913Prdm510090.000ENSPSIG00000013505PRDM510090.000Pelodiscus_sinensis
ENSMUSG00000029913Prdm510087.333ENSPMGG00000012622prdm59987.333Periophthalmus_magnuspinnatus
ENSMUSG00000029913Prdm57191.753ENSPMAG00000005248prdm510091.753Petromyzon_marinus
ENSMUSG00000029913Prdm59875.134ENSPFOG00000018630prdm59975.401Poecilia_formosa
ENSMUSG00000029913Prdm510088.000ENSPLAG00000014148prdm510088.000Poecilia_latipinna
ENSMUSG00000029913Prdm510088.000ENSPMEG00000018002prdm510088.000Poecilia_mexicana
ENSMUSG00000029913Prdm510088.000ENSPREG00000018366prdm510088.000Poecilia_reticulata
ENSMUSG00000029913Prdm510097.468ENSPPYG00000015031PRDM510097.468Pongo_abelii
ENSMUSG00000029913Prdm58895.333ENSPCAG00000011671PRDM59695.333Procavia_capensis
ENSMUSG00000029913Prdm510097.460ENSPCOG00000022828PRDM510097.460Propithecus_coquereli
ENSMUSG00000029913Prdm59393.671ENSPVAG00000012309PRDM510093.671Pteropus_vampyrus
ENSMUSG00000029913Prdm510088.000ENSPNYG00000012194prdm510088.000Pundamilia_nyererei
ENSMUSG00000029913Prdm59890.411ENSPNAG00000026181prdm59988.141Pygocentrus_nattereri
ENSMUSG00000029913Prdm58983.333ENSPNAG00000023191-9786.301Pygocentrus_nattereri
ENSMUSG00000029913Prdm59996.409ENSRNOG00000023679Prdm59997.723Rattus_norvegicus
ENSMUSG00000029913Prdm510097.831ENSRBIG00000041307PRDM510097.831Rhinopithecus_bieti
ENSMUSG00000029913Prdm58890.741ENSRROG00000035343PRDM59690.741Rhinopithecus_roxellana
ENSMUSG00000029913Prdm510097.349ENSSBOG00000022100PRDM510097.349Saimiri_boliviensis_boliviensis
ENSMUSG00000029913Prdm58590.164ENSSHAG00000003250PRDM510088.106Sarcophilus_harrisii
ENSMUSG00000029913Prdm510088.667ENSSFOG00015020478prdm59988.667Scleropages_formosus
ENSMUSG00000029913Prdm510088.000ENSSMAG00000018844prdm510088.000Scophthalmus_maximus
ENSMUSG00000029913Prdm59891.803ENSSDUG00000020397prdm510088.000Seriola_dumerili
ENSMUSG00000029913Prdm59891.753ENSSLDG00000013353prdm510088.000Seriola_lalandi_dorsalis
ENSMUSG00000029913Prdm59398.765ENSSARG00000014129-6894.872Sorex_araneus
ENSMUSG00000029913Prdm510090.950ENSSPUG00000009941PRDM510090.950Sphenodon_punctatus
ENSMUSG00000029913Prdm510088.000ENSSPAG00000013866prdm510088.000Stegastes_partitus
ENSMUSG00000029913Prdm510097.152ENSSSCG00000009101PRDM510097.152Sus_scrofa
ENSMUSG00000029913Prdm59389.241ENSTGUG00000001920PRDM510089.241Taeniopygia_guttata
ENSMUSG00000029913Prdm510088.000ENSTRUG00000013850prdm510088.000Takifugu_rubripes
ENSMUSG00000029913Prdm510074.172ENSTNIG00000005901prdm510070.189Tetraodon_nigroviridis
ENSMUSG00000029913Prdm590100.000ENSTBEG00000015386PRDM585100.000Tupaia_belangeri
ENSMUSG00000029913Prdm510096.519ENSTTRG00000010996PRDM510096.519Tursiops_truncatus
ENSMUSG00000029913Prdm59395.726ENSUAMG00000009994PRDM58495.726Ursus_americanus
ENSMUSG00000029913Prdm59597.152ENSUMAG00000003733PRDM59997.656Ursus_maritimus
ENSMUSG00000029913Prdm59680.063ENSVPAG00000007435PRDM510080.063Vicugna_pacos
ENSMUSG00000029913Prdm59097.152ENSVVUG00000013192PRDM510097.152Vulpes_vulpes
ENSMUSG00000029913Prdm510082.979ENSXETG00000002101prdm510082.979Xenopus_tropicalis
ENSMUSG00000029913Prdm510088.000ENSXCOG00000008567prdm510088.000Xiphophorus_couchianus
ENSMUSG00000029913Prdm59891.803ENSXMAG00000013825prdm510088.000Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000122negative regulation of transcription by RNA polymerase II-ISOProcess
GO:0000278mitotic cell cycle-ISOProcess
GO:0000976transcription regulatory region sequence-specific DNA binding-IEAFunction
GO:0000978RNA polymerase II proximal promoter sequence-specific DNA binding-ISOFunction
GO:0001227DNA-binding transcription repressor activity, RNA polymerase II-specific-ISOFunction
GO:0003676nucleic acid binding-IEAFunction
GO:0003677DNA binding-IEAFunction
GO:0005634nucleus-ISOComponent
GO:0005730nucleolus-ISOComponent
GO:0006325chromatin organization-IEAProcess
GO:0008168methyltransferase activity-IEAFunction
GO:0016575histone deacetylation-ISOProcess
GO:0016604nuclear body-ISOComponent
GO:0016740transferase activity-IEAFunction
GO:0032259methylation-IEAProcess
GO:0043565sequence-specific DNA binding-ISOFunction
GO:0044212transcription regulatory region DNA binding-ISOFunction
GO:0045892negative regulation of transcription, DNA-templated-ISOProcess
GO:0046872metal ion binding-IEAFunction
GO:0051567histone H3-K9 methylation-ISOProcess
GO:0070491repressing transcription factor binding-ISOFunction
GO:1990830cellular response to leukemia inhibitory factor20439489.IEPProcess

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