EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000030037 (Gene tree)
Gene ID: 68499
Gene Symbol: Mrpl53
Alias: 1110007K17Rik
Full Name: mitochondrial ribosomal protein L53
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 900 bases
Position: chr6:83109040-83109939
Accession: 1915749
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000109571	MRP_L53	PF10780.9	1e-15	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000113938	-	695	-	ENSMUSP00000109571	118 (aa)	-	Q9D1H8
ENSMUST00000129656	-	710	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000030037's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000030037's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000030037	Mrpl53	92	87.156	ENSG00000204822	MRPL53	88	90.816	Homo_sapiens
ENSMUSG00000030037	Mrpl53	91	83.333	ENSAMEG00000017229	MRPL53	87	88.660	Ailuropoda_melanoleuca
ENSMUSG00000030037	Mrpl53	92	84.404	ENSANAG00000032295	MRPL53	88	87.755	Aotus_nancymaae
ENSMUSG00000030037	Mrpl53	100	82.203	ENSBTAG00000016599	MRPL53	88	89.796	Bos_taurus
ENSMUSG00000030037	Mrpl53	92	85.321	ENSCJAG00000043158	MRPL53	88	88.776	Callithrix_jacchus
ENSMUSG00000030037	Mrpl53	97	80.702	ENSCAFG00020014067	MRPL53	98	80.702	Canis_lupus_dingo
ENSMUSG00000030037	Mrpl53	92	78.070	ENSCHIG00000021224	-	76	83.505	Capra_hircus
ENSMUSG00000030037	Mrpl53	100	81.356	ENSCHIG00000009415	-	88	88.776	Capra_hircus
ENSMUSG00000030037	Mrpl53	97	65.789	ENSCHIG00000020713	-	98	64.912	Capra_hircus
ENSMUSG00000030037	Mrpl53	100	78.814	ENSTSYG00000002278	-	100	78.814	Carlito_syrichta
ENSMUSG00000030037	Mrpl53	79	78.495	ENSTSYG00000037574	-	73	78.495	Carlito_syrichta
ENSMUSG00000030037	Mrpl53	91	77.778	ENSCPOG00000035123	MRPL53	88	81.633	Cavia_porcellus
ENSMUSG00000030037	Mrpl53	92	85.321	ENSCCAG00000025749	MRPL53	88	88.776	Cebus_capucinus
ENSMUSG00000030037	Mrpl53	92	86.239	ENSCATG00000009492	MRPL53	100	80.508	Cercocebus_atys
ENSMUSG00000030037	Mrpl53	91	80.556	ENSCLAG00000005239	MRPL53	88	84.694	Chinchilla_lanigera
ENSMUSG00000030037	Mrpl53	92	87.156	ENSCSAG00000015617	MRPL53	100	81.356	Chlorocebus_sabaeus
ENSMUSG00000030037	Mrpl53	92	85.321	ENSCANG00000042942	MRPL53	88	89.796	Colobus_angolensis_palliatus
ENSMUSG00000030037	Mrpl53	100	79.832	ENSCGRG00001012557	Mrpl53	100	84.034	Cricetulus_griseus_chok1gshd
ENSMUSG00000030037	Mrpl53	100	79.832	ENSCGRG00000008972	Mrpl53	100	84.034	Cricetulus_griseus_crigri
ENSMUSG00000030037	Mrpl53	100	71.186	ENSDNOG00000046731	MRPL53	100	71.186	Dasypus_novemcinctus
ENSMUSG00000030037	Mrpl53	83	85.714	ENSETEG00000012580	MRPL53	87	85.714	Echinops_telfairi
ENSMUSG00000030037	Mrpl53	80	86.170	ENSEASG00005010610	MRPL53	100	76.923	Equus_asinus_asinus
ENSMUSG00000030037	Mrpl53	80	86.170	ENSECAG00000026983	MRPL53	100	76.923	Equus_caballus
ENSMUSG00000030037	Mrpl53	91	82.407	ENSFCAG00000036033	MRPL53	100	77.966	Felis_catus
ENSMUSG00000030037	Mrpl53	97	74.561	ENSFDAG00000010624	MRPL53	88	81.633	Fukomys_damarensis
ENSMUSG00000030037	Mrpl53	92	86.239	ENSGGOG00000006504	MRPL53	100	80.508	Gorilla_gorilla
ENSMUSG00000030037	Mrpl53	91	75.926	ENSHGLG00000009928	MRPL53	88	78.571	Heterocephalus_glaber_female
ENSMUSG00000030037	Mrpl53	91	75.926	ENSHGLG00100017366	MRPL53	88	78.571	Heterocephalus_glaber_male
ENSMUSG00000030037	Mrpl53	100	77.119	ENSSTOG00000001025	MRPL53	100	78.814	Ictidomys_tridecemlineatus
ENSMUSG00000030037	Mrpl53	95	77.679	ENSJJAG00000011605	Mrpl53	88	83.673	Jaculus_jaculus
ENSMUSG00000030037	Mrpl53	84	81.818	ENSLAFG00000007990	MRPL53	95	85.106	Loxodonta_africana
ENSMUSG00000030037	Mrpl53	92	86.239	ENSMFAG00000002637	MRPL53	100	80.508	Macaca_fascicularis
ENSMUSG00000030037	Mrpl53	92	86.239	ENSMNEG00000040378	MRPL53	100	80.508	Macaca_nemestrina
ENSMUSG00000030037	Mrpl53	92	85.321	ENSMLEG00000032167	MRPL53	100	79.661	Mandrillus_leucophaeus
ENSMUSG00000030037	Mrpl53	100	87.395	ENSMAUG00000010618	Mrpl53	100	86.555	Mesocricetus_auratus
ENSMUSG00000030037	Mrpl53	92	81.651	ENSMICG00000042776	MRPL53	87	85.567	Microcebus_murinus
ENSMUSG00000030037	Mrpl53	100	88.136	ENSMOCG00000015167	Mrpl53	100	88.136	Microtus_ochrogaster
ENSMUSG00000030037	Mrpl53	100	96.610	MGP_CAROLIEiJ_G0028544	Mrpl53	100	96.610	Mus_caroli
ENSMUSG00000030037	Mrpl53	100	98.305	MGP_PahariEiJ_G0022279	Mrpl53	100	98.305	Mus_pahari
ENSMUSG00000030037	Mrpl53	100	100.000	MGP_SPRETEiJ_G0029550	Mrpl53	100	100.000	Mus_spretus
ENSMUSG00000030037	Mrpl53	97	79.825	ENSMPUG00000008055	MRPL53	87	88.660	Mustela_putorius_furo
ENSMUSG00000030037	Mrpl53	91	79.630	ENSMLUG00000002655	MRPL53	87	83.505	Myotis_lucifugus
ENSMUSG00000030037	Mrpl53	100	85.593	ENSNGAG00000001052	Mrpl53	100	85.593	Nannospalax_galili
ENSMUSG00000030037	Mrpl53	92	85.321	ENSNLEG00000032770	MRPL53	100	79.661	Nomascus_leucogenys
ENSMUSG00000030037	Mrpl53	86	68.932	ENSMEUG00000008909	MRPL53	93	70.707	Notamacropus_eugenii
ENSMUSG00000030037	Mrpl53	100	77.966	ENSOCUG00000015342	MRPL53	87	85.714	Oryctolagus_cuniculus
ENSMUSG00000030037	Mrpl53	92	83.486	ENSOGAG00000001059	MRPL53	88	87.755	Otolemur_garnettii
ENSMUSG00000030037	Mrpl53	100	81.356	ENSOARG00000012700	MRPL53	88	88.776	Ovis_aries
ENSMUSG00000030037	Mrpl53	92	86.239	ENSPPAG00000029905	MRPL53	100	80.508	Pan_paniscus
ENSMUSG00000030037	Mrpl53	91	82.407	ENSPPRG00000008059	MRPL53	87	86.598	Panthera_pardus
ENSMUSG00000030037	Mrpl53	91	82.407	ENSPTIG00000011649	MRPL53	100	77.966	Panthera_tigris_altaica
ENSMUSG00000030037	Mrpl53	92	86.239	ENSPTRG00000044829	MRPL53	100	80.508	Pan_troglodytes
ENSMUSG00000030037	Mrpl53	92	86.239	ENSPANG00000032404	MRPL53	100	80.508	Papio_anubis
ENSMUSG00000030037	Mrpl53	100	87.288	ENSPEMG00000008725	Mrpl53	100	85.950	Peromyscus_maniculatus_bairdii
ENSMUSG00000030037	Mrpl53	97	75.439	ENSPCAG00000016829	MRPL53	88	82.653	Procavia_capensis
ENSMUSG00000030037	Mrpl53	92	79.817	ENSPCOG00000028676	MRPL53	88	84.694	Propithecus_coquereli
ENSMUSG00000030037	Mrpl53	86	84.314	ENSPVAG00000013958	MRPL53	88	85.714	Pteropus_vampyrus
ENSMUSG00000030037	Mrpl53	100	95.798	ENSRNOG00000052279	LOC103692169	100	95.798	Rattus_norvegicus
ENSMUSG00000030037	Mrpl53	100	95.798	ENSRNOG00000053109	Mrpl53	100	95.798	Rattus_norvegicus
ENSMUSG00000030037	Mrpl53	91	85.185	ENSRBIG00000013215	MRPL53	100	79.661	Rhinopithecus_bieti
ENSMUSG00000030037	Mrpl53	91	85.185	ENSRROG00000045669	MRPL53	88	88.776	Rhinopithecus_roxellana
ENSMUSG00000030037	Mrpl53	92	85.321	ENSSBOG00000026949	MRPL53	88	88.776	Saimiri_boliviensis_boliviensis
ENSMUSG00000030037	Mrpl53	90	65.421	ENSSHAG00000016957	MRPL53	89	72.632	Sarcophilus_harrisii
ENSMUSG00000030037	Mrpl53	87	89.320	ENSSARG00000010686	MRPL53	87	88.776	Sorex_araneus
ENSMUSG00000030037	Mrpl53	86	84.158	ENSTBEG00000017688	MRPL53	96	85.714	Tupaia_belangeri
ENSMUSG00000030037	Mrpl53	100	81.356	ENSTTRG00000012719	MRPL53	100	81.356	Tursiops_truncatus
ENSMUSG00000030037	Mrpl53	91	82.407	ENSUAMG00000021706	MRPL53	87	87.629	Ursus_americanus
ENSMUSG00000030037	Mrpl53	91	82.407	ENSUMAG00000001594	MRPL53	87	87.629	Ursus_maritimus
ENSMUSG00000030037	Mrpl53	97	79.825	ENSVVUG00000004459	MRPL53	98	79.825	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005762	mitochondrial large ribosomal subunit	-	ISO	Component
GO:0005840	ribosome	-	IEA	Component
GO:0008150	biological_process	-	ND	Process