EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000030204 (Gene tree)
Gene ID
67755
Gene Symbol
Ddx47
Alias
4930588A18Rik
Full Name
DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Plus strand
Length
12165 bases
Position
chr6:135011612-135023776
Accession
1915005
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000119231ResIIIPF04851.151.4e-0511
ENSMUSP00000032326ResIIIPF04851.151.9e-0511
ENSMUSP00000119231DEADPF00270.292.3e-4811
ENSMUSP00000032326DEADPF00270.293.6e-4811
ENSMUSP00000145232DEADPF00270.295.6e-3812
ENSMUSP00000145232DEADPF00270.295.6e-3822
ENSMUSP00000145139DEADPF00270.291.4e-2111
ENSMUSP00000145463DEADPF00270.293.8e-2111
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
23912277The RNA binding protein repertoire of embryonic stem cellsIC & mESC2013 Aug 4Kwon SCDOI: 10.1038/nsmb.2638
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000032326-1764-ENSMUSP00000032326455 (aa)-Q9CWX9
ENSMUST00000134549-791--- (aa)--
ENSMUST00000204646-1139-ENSMUSP00000145232380 (aa)-A0A0N4SVT1
ENSMUST00000131719-978--- (aa)--
ENSMUST00000155277-4006--- (aa)--
ENSMUST00000205055-551-ENSMUSP00000145463180 (aa)-A0A0N4SWC5
ENSMUST00000130851-435-ENSMUSP00000115183138 (aa)-D3YWF9
ENSMUST00000154558-1078-ENSMUSP00000119231360 (aa)-F6QKD2
ENSMUST00000205244-607-ENSMUSP00000145139196 (aa)-A0A0N4SVK2
ENSMUST00000155698-620--- (aa)--
ENSMUST00000155022-3269-ENSMUSP0000014495962 (aa)-A0A0N4SV55
ENSMUST00000123022-693--- (aa)--
Gene Model
Click here to download ENSMUSG00000030204's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000030204's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMUSG00000030204Ddx479430.548ENSMUSG00000022884Eif4a29432.637
ENSMUSG00000030204Ddx479032.095ENSMUSG00000005481Ddx398932.620
ENSMUSG00000030204Ddx479333.760ENSMUSG00000021758Ddx45634.271
ENSMUSG00000030204Ddx478633.690ENSMUSG00000000787Ddx3x5634.492
ENSMUSG00000030204Ddx479430.175ENSMUSG00000020076Ddx505431.204
ENSMUSG00000030204Ddx479331.759ENSMUSG00000032097Ddx67832.987
ENSMUSG00000030204Ddx478135.977ENSMUSG00000029389Ddx555935.977
ENSMUSG00000030204Ddx478536.869ENSMUSG00000055065Ddx177238.305
ENSMUSG00000030204Ddx479330.952ENSMUSG00000107906Gm55809232.275
ENSMUSG00000030204Ddx478633.155ENSMUSG00000069045Ddx3y5734.492
ENSMUSG00000030204Ddx479031.926ENSMUSG00000019432Ddx39b9936.486
ENSMUSG00000030204Ddx478638.889ENSMUSG00000004393Ddx569935.887
ENSMUSG00000030204Ddx479538.028ENSMUSG00000041645Ddx245342.188
ENSMUSG00000030204Ddx478533.333ENSMUSG00000021494Ddx415835.556
ENSMUSG00000030204Ddx479545.824ENSMUSG00000057788Ddx499145.824
ENSMUSG00000030204Ddx479330.952ENSMUSG00000094973Gm89949232.540
ENSMUSG00000030204Ddx479031.806ENSMUSG00000026404Ddx596033.602
ENSMUSG00000030204Ddx478531.458ENSMUSG00000059796Eif4a19631.458
ENSMUSG00000030204Ddx478646.875ENSMUSG00000037149Ddx16046.875
ENSMUSG00000030204Ddx478332.011ENSMUSG00000020677Ddx525833.428
ENSMUSG00000030204Ddx479530.749ENSMUSG00000025580Eif4a39432.041
ENSMUSG00000030204Ddx478837.705ENSMUSG00000001674Ddx185538.525
ENSMUSG00000030204Ddx479134.218ENSMUSG00000070291Ddx435935.678
ENSMUSG00000030204Ddx478633.690ENSMUSG00000039224D1Pas15734.759
ENSMUSG00000030204Ddx478435.652ENSMUSG00000026806Ddx316131.765
ENSMUSG00000030204Ddx477049.398ENSMUSG00000045538Ddx287233.079
ENSMUSG00000030204Ddx478137.168ENSMUSG00000020719Ddx57137.457
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000030204Ddx4710098.333ENSG00000213782DDX479898.529Homo_sapiens
ENSMUSG00000030204Ddx479385.000ENSAPOG00000021751ddx479083.871Acanthochromis_polyacanthus
ENSMUSG00000030204Ddx47100100.000ENSAMEG00000010740DDX4710095.824Ailuropoda_melanoleuca
ENSMUSG00000030204Ddx479581.818ENSACIG00000022802ddx478984.346Amphilophus_citrinellus
ENSMUSG00000030204Ddx479384.941ENSAOCG00000015213ddx478984.527Amphiprion_ocellaris
ENSMUSG00000030204Ddx479384.471ENSAPEG00000014476ddx479186.768Amphiprion_percula
ENSMUSG00000030204Ddx479485.000ENSATEG00000010277ddx479183.908Anabas_testudineus
ENSMUSG00000030204Ddx479095.000ENSAPLG00000015324DDX479589.342Anas_platyrhynchos
ENSMUSG00000030204Ddx479295.000ENSACAG00000010648DDX479889.522Anolis_carolinensis
ENSMUSG00000030204Ddx4710098.333ENSANAG00000025235DDX4710096.477Aotus_nancymaae
ENSMUSG00000030204Ddx479784.746ENSAMXG00000010727ddx479679.601Astyanax_mexicanus
ENSMUSG00000030204Ddx47100100.000ENSBTAG00000019608DDX4710096.061Bos_taurus
ENSMUSG00000030204Ddx479364.908WBGene00012059T26G10.19163.087Caenorhabditis_elegans
ENSMUSG00000030204Ddx4710098.333ENSCJAG00000021633DDX4710095.824Callithrix_jacchus
ENSMUSG00000030204Ddx47100100.000ENSCAFG00000013224DDX479596.272Canis_familiaris
ENSMUSG00000030204Ddx47100100.000ENSCAFG00020006612DDX4710096.272Canis_lupus_dingo
ENSMUSG00000030204Ddx47100100.000ENSCHIG00000026011DDX479995.833Capra_hircus
ENSMUSG00000030204Ddx4710099.265ENSTSYG00000002978DDX4710095.824Carlito_syrichta
ENSMUSG00000030204Ddx476496.575ENSCAPG00000002814DDX4710096.575Cavia_aperea
ENSMUSG00000030204Ddx47100100.000ENSCPOG00000035172DDX4710096.491Cavia_porcellus
ENSMUSG00000030204Ddx4710098.333ENSCCAG00000025717DDX4710096.264Cebus_capucinus
ENSMUSG00000030204Ddx479991.111ENSCATG00000038188-9992.400Cercocebus_atys
ENSMUSG00000030204Ddx4710098.333ENSCATG00000014281-10096.044Cercocebus_atys
ENSMUSG00000030204Ddx47100100.000ENSCLAG00000015856DDX4710096.484Chinchilla_lanigera
ENSMUSG00000030204Ddx4710098.333ENSCSAG00000008569DDX4710096.044Chlorocebus_sabaeus
ENSMUSG00000030204Ddx479883.333ENSCHOG00000010943DDX4710061.978Choloepus_hoffmanni
ENSMUSG00000030204Ddx4710093.333ENSCPBG00000020967-9989.890Chrysemys_picta_bellii
ENSMUSG00000030204Ddx479670.103ENSCING00000002081-9172.973Ciona_intestinalis
ENSMUSG00000030204Ddx478977.451ENSCSAVG00000011566-9670.534Ciona_savignyi
ENSMUSG00000030204Ddx4710098.333ENSCANG00000040222DDX4710096.264Colobus_angolensis_palliatus
ENSMUSG00000030204Ddx47100100.000ENSCGRG00001014927Ddx4710097.143Cricetulus_griseus_chok1gshd
ENSMUSG00000030204Ddx47100100.000ENSCGRG00000010351Ddx4710097.143Cricetulus_griseus_crigri
ENSMUSG00000030204Ddx479686.441ENSCSEG00000007687ddx479285.432Cynoglossus_semilaevis
ENSMUSG00000030204Ddx475481.633ENSDARG00000102353ddx477969.841Danio_rerio
ENSMUSG00000030204Ddx47100100.000ENSDNOG00000040799DDX4710089.934Dasypus_novemcinctus
ENSMUSG00000030204Ddx479680.000FBgn0032919CG92538771.783Drosophila_melanogaster
ENSMUSG00000030204Ddx47100100.000ENSETEG00000011487DDX4781100.000Echinops_telfairi
ENSMUSG00000030204Ddx477078.641ENSEBUG00000003908-7183.500Eptatretus_burgeri
ENSMUSG00000030204Ddx47100100.000ENSEASG00005014653DDX4710096.044Equus_asinus_asinus
ENSMUSG00000030204Ddx47100100.000ENSECAG00000023622DDX4710096.264Equus_caballus
ENSMUSG00000030204Ddx479297.521ENSEEUG00000008639DDX478497.516Erinaceus_europaeus
ENSMUSG00000030204Ddx479382.864ENSELUG00000009495ddx478182.710Esox_lucius
ENSMUSG00000030204Ddx4710098.333ENSFCAG00000013990DDX4710095.385Felis_catus
ENSMUSG00000030204Ddx479291.885ENSFALG00000011391DDX479888.326Ficedula_albicollis
ENSMUSG00000030204Ddx476571.429ENSFDAG00000004127-7370.714Fukomys_damarensis
ENSMUSG00000030204Ddx47100100.000ENSFDAG00000014635-10093.682Fukomys_damarensis
ENSMUSG00000030204Ddx479685.000ENSFHEG00000011435ddx479482.301Fundulus_heteroclitus
ENSMUSG00000030204Ddx479279.200ENSGMOG00000010290ddx4710084.073Gadus_morhua
ENSMUSG00000030204Ddx4710096.667ENSGALG00000011794DDX479987.991Gallus_gallus
ENSMUSG00000030204Ddx479686.667ENSGAFG00000017403ddx479382.844Gambusia_affinis
ENSMUSG00000030204Ddx479286.441ENSGACG00000007092ddx479582.232Gasterosteus_aculeatus
ENSMUSG00000030204Ddx479693.333ENSGAGG00000023801DDX478988.839Gopherus_agassizii
ENSMUSG00000030204Ddx4710098.333ENSGGOG00000005882DDX4710095.824Gorilla_gorilla
ENSMUSG00000030204Ddx479983.333ENSHBUG00000022213ddx479281.839Haplochromis_burtoni
ENSMUSG00000030204Ddx47100100.000ENSHGLG00000007623DDX4710095.385Heterocephalus_glaber_female
ENSMUSG00000030204Ddx47100100.000ENSHGLG00100009764DDX4710095.385Heterocephalus_glaber_male
ENSMUSG00000030204Ddx479883.333ENSHCOG00000005496ddx479084.138Hippocampus_comes
ENSMUSG00000030204Ddx479682.353ENSIPUG00000023788ddx479482.353Ictalurus_punctatus
ENSMUSG00000030204Ddx479498.592ENSSTOG00000027266DDX479798.592Ictidomys_tridecemlineatus
ENSMUSG00000030204Ddx47100100.000ENSJJAG00000000118Ddx4710095.165Jaculus_jaculus
ENSMUSG00000030204Ddx479383.848ENSKMAG00000013071ddx478982.569Kryptolebias_marmoratus
ENSMUSG00000030204Ddx479481.890ENSLBEG00000028348ddx479579.870Labrus_bergylta
ENSMUSG00000030204Ddx479487.850ENSLACG00000013814DDX479985.398Latimeria_chalumnae
ENSMUSG00000030204Ddx4710098.333ENSLAFG00000015474DDX4710096.264Loxodonta_africana
ENSMUSG00000030204Ddx4710098.333ENSMFAG00000042577DDX4710096.044Macaca_fascicularis
ENSMUSG00000030204Ddx4710098.333ENSMMUG00000017993DDX4710096.044Macaca_mulatta
ENSMUSG00000030204Ddx4710098.529ENSMNEG00000044164DDX4710084.835Macaca_nemestrina
ENSMUSG00000030204Ddx479992.593ENSMLEG00000037204-8992.520Mandrillus_leucophaeus
ENSMUSG00000030204Ddx4710098.333ENSMLEG00000040358-10096.044Mandrillus_leucophaeus
ENSMUSG00000030204Ddx479686.667ENSMAMG00000008915ddx479481.195Mastacembelus_armatus
ENSMUSG00000030204Ddx479983.333ENSMZEG00005004902DDX479269.778Maylandia_zebra
ENSMUSG00000030204Ddx479945.250ENSMZEG00005022989-9345.694Maylandia_zebra
ENSMUSG00000030204Ddx479091.484ENSMGAG00000011857DDX479891.059Meleagris_gallopavo
ENSMUSG00000030204Ddx47100100.000ENSMAUG00000012214Ddx4710097.802Mesocricetus_auratus
ENSMUSG00000030204Ddx4766100.000ENSMICG00000044024-9782.243Microcebus_murinus
ENSMUSG00000030204Ddx478699.219ENSMICG00000010086DDX4710097.735Microcebus_murinus
ENSMUSG00000030204Ddx47100100.000ENSMOCG00000003693Ddx4710097.802Microtus_ochrogaster
ENSMUSG00000030204Ddx479482.812ENSMMOG00000008610ddx479679.730Mola_mola
ENSMUSG00000030204Ddx4710096.667ENSMODG00000018223DDX479989.693Monodelphis_domestica
ENSMUSG00000030204Ddx479685.000ENSMALG00000002420ddx479183.182Monopterus_albus
ENSMUSG00000030204Ddx47100100.000MGP_CAROLIEiJ_G0028986Ddx47100100.000Mus_caroli
ENSMUSG00000030204Ddx47100100.000MGP_PahariEiJ_G0022748Ddx47100100.000Mus_pahari
ENSMUSG00000030204Ddx47100100.000MGP_SPRETEiJ_G0030034Ddx47100100.000Mus_spretus
ENSMUSG00000030204Ddx4710098.333ENSMPUG00000011726DDX4710095.604Mustela_putorius_furo
ENSMUSG00000030204Ddx4710096.667ENSMLUG00000003163DDX4710095.165Myotis_lucifugus
ENSMUSG00000030204Ddx47100100.000ENSNGAG00000020166Ddx4710097.582Nannospalax_galili
ENSMUSG00000030204Ddx479983.333ENSNBRG00000001394ddx479580.879Neolamprologus_brichardi
ENSMUSG00000030204Ddx4710098.333ENSNLEG00000003605DDX4710095.824Nomascus_leucogenys
ENSMUSG00000030204Ddx478782.487ENSMEUG00000005930DDX479982.487Notamacropus_eugenii
ENSMUSG00000030204Ddx478199.194ENSOPRG00000014446DDX477997.667Ochotona_princeps
ENSMUSG00000030204Ddx47100100.000ENSODEG00000012890DDX4710095.879Octodon_degus
ENSMUSG00000030204Ddx479983.333ENSONIG00000008325ddx479980.752Oreochromis_niloticus
ENSMUSG00000030204Ddx476889.695ENSOANG00000003026-9490.335Ornithorhynchus_anatinus
ENSMUSG00000030204Ddx4710098.333ENSOCUG00000014390DDX4710095.824Oryctolagus_cuniculus
ENSMUSG00000030204Ddx479384.941ENSORLG00000015021ddx478884.848Oryzias_latipes
ENSMUSG00000030204Ddx479285.407ENSORLG00020005546ddx478987.277Oryzias_latipes_hni
ENSMUSG00000030204Ddx479285.167ENSORLG00015017712ddx478884.848Oryzias_latipes_hsok
ENSMUSG00000030204Ddx479685.000ENSOMEG00000008065ddx479181.859Oryzias_melastigma
ENSMUSG00000030204Ddx47100100.000ENSOGAG00000003748DDX4710092.527Otolemur_garnettii
ENSMUSG00000030204Ddx47100100.000ENSOARG00000020845DDX479796.053Ovis_aries
ENSMUSG00000030204Ddx4710098.333ENSPPAG00000039793DDX4710095.824Pan_paniscus
ENSMUSG00000030204Ddx47100100.000ENSPPRG00000017561DDX4710095.824Panthera_pardus
ENSMUSG00000030204Ddx47100100.000ENSPTIG00000019604DDX4710095.824Panthera_tigris_altaica
ENSMUSG00000030204Ddx4710098.333ENSPTRG00000033743DDX4710095.604Pan_troglodytes
ENSMUSG00000030204Ddx4710098.333ENSPANG00000016430DDX4710095.604Papio_anubis
ENSMUSG00000030204Ddx479086.667ENSPKIG00000006718ddx478685.787Paramormyrops_kingsleyae
ENSMUSG00000030204Ddx479691.304ENSPSIG00000006056DDX479691.304Pelodiscus_sinensis
ENSMUSG00000030204Ddx479384.360ENSPMGG00000009920ddx479183.105Periophthalmus_magnuspinnatus
ENSMUSG00000030204Ddx47100100.000ENSPEMG00000009746Ddx4710097.363Peromyscus_maniculatus_bairdii
ENSMUSG00000030204Ddx479386.256ENSPMAG00000000186-10086.256Petromyzon_marinus
ENSMUSG00000030204Ddx4710096.667ENSPCIG00000029927DDX479990.549Phascolarctos_cinereus
ENSMUSG00000030204Ddx479686.667ENSPFOG00000003330ddx479082.628Poecilia_formosa
ENSMUSG00000030204Ddx479873.048ENSPLAG00000014318ddx478678.765Poecilia_latipinna
ENSMUSG00000030204Ddx479686.667ENSPMEG00000018616ddx478983.296Poecilia_mexicana
ENSMUSG00000030204Ddx479686.667ENSPREG00000015560ddx479381.124Poecilia_reticulata
ENSMUSG00000030204Ddx4710098.333ENSPPYG00000004309DDX4710095.824Pongo_abelii
ENSMUSG00000030204Ddx476297.315ENSPCAG00000013197-7197.315Procavia_capensis
ENSMUSG00000030204Ddx47100100.000ENSPCOG00000028218DDX4710096.703Propithecus_coquereli
ENSMUSG00000030204Ddx47100100.000ENSPVAG00000002640DDX479993.172Pteropus_vampyrus
ENSMUSG00000030204Ddx479983.333ENSPNYG00000020669ddx479281.839Pundamilia_nyererei
ENSMUSG00000030204Ddx479482.093ENSPNAG00000011435ddx479481.136Pygocentrus_nattereri
ENSMUSG00000030204Ddx47100100.000ENSRNOG00000007838Ddx4710098.901Rattus_norvegicus
ENSMUSG00000030204Ddx4710098.333ENSRBIG00000026934DDX4710096.044Rhinopithecus_bieti
ENSMUSG00000030204Ddx4710098.333ENSRROG00000025014DDX4710096.044Rhinopithecus_roxellana
ENSMUSG00000030204Ddx479653.964YHR065C-8155.637Saccharomyces_cerevisiae
ENSMUSG00000030204Ddx4710098.333ENSSBOG00000035866DDX4710095.824Saimiri_boliviensis_boliviensis
ENSMUSG00000030204Ddx4710096.667ENSSHAG00000010825DDX478889.912Sarcophilus_harrisii
ENSMUSG00000030204Ddx479088.333ENSSFOG00015013392ddx479384.138Scleropages_formosus
ENSMUSG00000030204Ddx479388.333ENSSMAG00000004179ddx479082.727Scophthalmus_maximus
ENSMUSG00000030204Ddx479685.000ENSSDUG00000018110ddx479076.972Seriola_dumerili
ENSMUSG00000030204Ddx479685.000ENSSLDG00000018142ddx478982.500Seriola_lalandi_dorsalis
ENSMUSG00000030204Ddx47100100.000ENSSARG00000007535DDX4710094.983Sorex_araneus
ENSMUSG00000030204Ddx479390.824ENSSPUG00000004958DDX479390.824Sphenodon_punctatus
ENSMUSG00000030204Ddx479384.706ENSSPAG00000016431ddx478982.727Stegastes_partitus
ENSMUSG00000030204Ddx47100100.000ENSSSCG00000033149DDX479698.357Sus_scrofa
ENSMUSG00000030204Ddx4710096.667ENSTGUG00000009385DDX4710088.767Taeniopygia_guttata
ENSMUSG00000030204Ddx4710083.333ENSTRUG00000021826ddx479680.973Takifugu_rubripes
ENSMUSG00000030204Ddx47100100.000ENSTBEG00000013697DDX4710084.835Tupaia_belangeri
ENSMUSG00000030204Ddx4710098.333ENSTTRG00000015036DDX479995.374Tursiops_truncatus
ENSMUSG00000030204Ddx47100100.000ENSUAMG00000016382DDX479996.264Ursus_americanus
ENSMUSG00000030204Ddx47100100.000ENSUMAG00000002358DDX4710096.044Ursus_maritimus
ENSMUSG00000030204Ddx477496.491ENSVPAG00000012483-10075.214Vicugna_pacos
ENSMUSG00000030204Ddx4781100.000ENSVPAG00000004648-59100.000Vicugna_pacos
ENSMUSG00000030204Ddx47100100.000ENSVVUG00000004697DDX479596.272Vulpes_vulpes
ENSMUSG00000030204Ddx479590.323ENSXETG00000022984ddx479690.323Xenopus_tropicalis
ENSMUSG00000030204Ddx475786.408ENSXETG00000032749-8186.408Xenopus_tropicalis
ENSMUSG00000030204Ddx479986.667ENSXCOG00000015880ddx479681.978Xiphophorus_couchianus
ENSMUSG00000030204Ddx479985.000ENSXMAG00000008268ddx478581.758Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000166nucleotide binding-IEAFunction
GO:0003676nucleic acid binding-IEAFunction
GO:0003723RNA binding-IEAFunction
GO:0004386helicase activity-IEAFunction
GO:0005524ATP binding-IEAFunction
GO:0005634nucleus-IEAComponent
GO:0005730nucleolus-ISOComponent
GO:0006364rRNA processing-ISOProcess
GO:0006397mRNA processing-IEAProcess
GO:0006915apoptotic process-IEAProcess
GO:0008380RNA splicing-ISOProcess
GO:0008625extrinsic apoptotic signaling pathway via death domain receptors-ISOProcess
GO:0016787hydrolase activity-IEAFunction

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