EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000030220 (Gene tree)
Gene ID: 11857
Gene Symbol: Arhgdib
Alias: D4|Gdid4|Ly-GDI
Full Name: Rho%2C GDP dissociation inhibitor (GDI) beta
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 18245
Position: chr6: 136923655-136941899
Accession: 101940
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000154440	-	524	-	ENSMUSP00000120047	50 (aa)	-	D3YWL7
ENSMUST00000204934	-	396	-	ENSMUSP00000145103	89 (aa)	-	A0A0N4SVH4
ENSMUST00000111891	-	828	-	ENSMUSP00000107522	200 (aa)	-	Q61599
ENSMUST00000032344	-	1193	XM_006505404	ENSMUSP00000032344	200 (aa)	XP_006505467	Q61599
ENSMUST00000111892	-	1153	-	ENSMUSP00000107523	200 (aa)	-	Q61599

Gene Model

Click here to download ENSMUSG00000030220's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04722	Neurotrophin signaling pathway	KEGG
mmu04962	Vasopressin-regulated water reabsorption	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000030220's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000030220	Arhgdib	99	75.000	ENSG00000141522	ARHGDIA	89	82.812	Homo_sapiens
ENSMUSG00000030220	Arhgdib	100	73.034	ENSMUSG00000025132	Arhgdia	93	68.421	Mus_musculus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003924	GTPase activity	-	ISO	Function
GO:0005094	Rho GDP-dissociation inhibitor activity	21873635.	IBA	Function
GO:0005094	Rho GDP-dissociation inhibitor activity	-	ISO	Function
GO:0005096	GTPase activator activity	-	IEA	Function
GO:0005737	cytoplasm	-	IEA	Component
GO:0005829	cytosol	21873635.	IBA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0007266	Rho protein signal transduction	21873635.	IBA	Process
GO:0016020	membrane	21873635.	IBA	Component
GO:0016020	membrane	-	ISO	Component
GO:0035023	regulation of Rho protein signal transduction	-	ISO	Process
GO:0048365	Rac GTPase binding	21873635.	IBA	Function
GO:0048365	Rac GTPase binding	-	ISO	Function
GO:1901164	negative regulation of trophoblast cell migration	-	ISO	Process
GO:2000249	regulation of actin cytoskeleton reorganization	-	ISO	Process