EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000030243 (Gene tree)
Gene ID: 19691
Gene Symbol: Recql
Alias: RecQ1
Full Name: RecQ protein-like
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 36746 bases
Position: chr6:142350342-142387087
Accession: 103021
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000032370	ResIII	PF04851.15	7.1e-05	1	1
ENSMUSP00000098394	ResIII	PF04851.15	7.2e-05	1	1
ENSMUSP00000107434	ResIII	PF04851.15	7.2e-05	1	1
ENSMUSP00000032370	DEAD	PF00270.29	2.5e-16	1	1
ENSMUSP00000098394	DEAD	PF00270.29	2.5e-16	1	1
ENSMUSP00000107434	DEAD	PF00270.29	2.6e-16	1	1
ENSMUSP00000122328	DEAD	PF00270.29	6.1e-10	1	1
ENSMUSP00000145179	DEAD	PF00270.29	6.1e-10	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000129694	-	710	-	ENSMUSP00000122328	167 (aa)	-	D3Z6T0
ENSMUST00000111803	-	3389	XM_011241573	ENSMUSP00000107434	648 (aa)	XP_011239875	Q9Z129
ENSMUST00000141504	-	3671	-	ENSMUSP00000119452	235 (aa)	-	F6S4D9
ENSMUST00000128082	-	349	-	ENSMUSP00000120951	85 (aa)	-	D3YZW9
ENSMUST00000154870	-	783	-	-	- (aa)	-	-
ENSMUST00000143102	-	323	-	-	- (aa)	-	-
ENSMUST00000032370	-	2112	-	ENSMUSP00000032370	631 (aa)	-	Q9Z129
ENSMUST00000123912	-	324	-	ENSMUSP00000122409	61 (aa)	-	F7DB73
ENSMUST00000203772	-	824	-	ENSMUSP00000145179	167 (aa)	-	D3Z6T0
ENSMUST00000155149	-	667	-	-	- (aa)	-	-
ENSMUST00000100832	-	3054	-	ENSMUSP00000098394	634 (aa)	-	E9Q3N0
ENSMUST00000138578	-	647	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000030243's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000030243's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000030243	Recql	65	38.161	ENSMUSG00000020752	Recql5	81	46.835

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000030243	Recql	100	86.228	ENSG00000004700	RECQL	100	87.940	Homo_sapiens
ENSMUSG00000030243	Recql	57	61.458	ENSAPOG00000021194	-	69	59.341	Acanthochromis_polyacanthus
ENSMUSG00000030243	Recql	100	81.481	ENSAMEG00000016233	RECQL	100	81.481	Ailuropoda_melanoleuca
ENSMUSG00000030243	Recql	92	58.784	ENSACIG00000020781	recql	93	58.953	Amphilophus_citrinellus
ENSMUSG00000030243	Recql	97	56.515	ENSAOCG00000010244	recql	97	56.452	Amphiprion_ocellaris
ENSMUSG00000030243	Recql	97	55.343	ENSAPEG00000002040	recql	97	55.608	Amphiprion_percula
ENSMUSG00000030243	Recql	97	56.300	ENSATEG00000023342	recql	98	57.075	Anabas_testudineus
ENSMUSG00000030243	Recql	99	71.894	ENSAPLG00000003404	RECQL	97	73.041	Anas_platyrhynchos
ENSMUSG00000030243	Recql	99	71.515	ENSACAG00000017383	RECQL	99	78.714	Anolis_carolinensis
ENSMUSG00000030243	Recql	100	85.629	ENSANAG00000035372	RECQL	99	85.494	Aotus_nancymaae
ENSMUSG00000030243	Recql	93	58.319	ENSACLG00000021416	recql	99	53.233	Astatotilapia_calliptera
ENSMUSG00000030243	Recql	98	57.853	ENSAMXG00000014249	recql	98	56.811	Astyanax_mexicanus
ENSMUSG00000030243	Recql	100	83.234	ENSBTAG00000021083	RECQL	100	82.280	Bos_taurus
ENSMUSG00000030243	Recql	96	44.625	WBGene00019334	K02F3.12	98	44.625	Caenorhabditis_elegans
ENSMUSG00000030243	Recql	100	86.228	ENSCJAG00000044420	RECQL	100	84.438	Callithrix_jacchus
ENSMUSG00000030243	Recql	99	83.441	ENSCAFG00000012221	RECQL	100	82.253	Canis_familiaris
ENSMUSG00000030243	Recql	99	83.441	ENSCAFG00020007872	RECQL	100	82.253	Canis_lupus_dingo
ENSMUSG00000030243	Recql	100	83.234	ENSCHIG00000024281	RECQL	100	81.818	Capra_hircus
ENSMUSG00000030243	Recql	100	86.826	ENSTSYG00000009224	RECQL	100	84.438	Carlito_syrichta
ENSMUSG00000030243	Recql	100	86.826	ENSCPOG00000024644	RECQL	99	85.648	Cavia_porcellus
ENSMUSG00000030243	Recql	100	86.826	ENSCCAG00000028085	RECQL	100	85.824	Cebus_capucinus
ENSMUSG00000030243	Recql	100	87.425	ENSCATG00000036038	RECQL	100	85.670	Cercocebus_atys
ENSMUSG00000030243	Recql	100	84.722	ENSCLAG00000014618	RECQL	100	84.722	Chinchilla_lanigera
ENSMUSG00000030243	Recql	100	87.425	ENSCSAG00000007974	RECQL	100	85.208	Chlorocebus_sabaeus
ENSMUSG00000030243	Recql	100	83.234	ENSCHOG00000002452	RECQL	90	83.234	Choloepus_hoffmanni
ENSMUSG00000030243	Recql	99	73.820	ENSCPBG00000009109	RECQL	99	73.820	Chrysemys_picta_bellii
ENSMUSG00000030243	Recql	99	40.588	ENSCING00000004012	-	92	47.232	Ciona_intestinalis
ENSMUSG00000030243	Recql	94	39.490	ENSCSAVG00000011052	-	99	42.334	Ciona_savignyi
ENSMUSG00000030243	Recql	100	86.826	ENSCANG00000035259	RECQL	100	85.208	Colobus_angolensis_palliatus
ENSMUSG00000030243	Recql	100	90.419	ENSCGRG00001015141	Recql	100	90.123	Cricetulus_griseus_chok1gshd
ENSMUSG00000030243	Recql	100	90.419	ENSCGRG00000003545	Recql	100	90.123	Cricetulus_griseus_crigri
ENSMUSG00000030243	Recql	93	56.711	ENSCSEG00000015932	recql	94	56.711	Cynoglossus_semilaevis
ENSMUSG00000030243	Recql	95	58.320	ENSCVAG00000014613	recql	94	59.122	Cyprinodon_variegatus
ENSMUSG00000030243	Recql	98	56.366	ENSDARG00000007175	recql	99	56.366	Danio_rerio
ENSMUSG00000030243	Recql	100	85.030	ENSDNOG00000013557	RECQL	99	88.382	Dasypus_novemcinctus
ENSMUSG00000030243	Recql	100	80.240	ENSDORG00000015884	Recql	100	80.240	Dipodomys_ordii
ENSMUSG00000030243	Recql	96	61.491	ENSETEG00000018325	-	63	74.839	Echinops_telfairi
ENSMUSG00000030243	Recql	96	83.230	ENSETEG00000018631	-	99	75.234	Echinops_telfairi
ENSMUSG00000030243	Recql	99	80.128	ENSEASG00005014041	RECQL	95	87.780	Equus_asinus_asinus
ENSMUSG00000030243	Recql	100	81.972	ENSECAG00000024762	RECQL	87	81.972	Equus_caballus
ENSMUSG00000030243	Recql	98	57.778	ENSELUG00000011528	recql	97	57.962	Esox_lucius
ENSMUSG00000030243	Recql	100	82.870	ENSFCAG00000030888	RECQL	99	82.870	Felis_catus
ENSMUSG00000030243	Recql	96	72.277	ENSFALG00000002635	RECQL	98	70.886	Ficedula_albicollis
ENSMUSG00000030243	Recql	100	85.629	ENSFDAG00000019693	RECQL	100	84.568	Fukomys_damarensis
ENSMUSG00000030243	Recql	99	56.270	ENSFHEG00000014563	recql	99	57.008	Fundulus_heteroclitus
ENSMUSG00000030243	Recql	80	58.185	ENSGMOG00000010504	recql	100	58.185	Gadus_morhua
ENSMUSG00000030243	Recql	99	73.089	ENSGALG00000013174	RECQL	98	71.889	Gallus_gallus
ENSMUSG00000030243	Recql	98	55.079	ENSGACG00000001005	recql	98	56.899	Gasterosteus_aculeatus
ENSMUSG00000030243	Recql	99	73.820	ENSGAGG00000025428	RECQL	99	73.820	Gopherus_agassizii
ENSMUSG00000030243	Recql	100	85.030	ENSGGOG00000010985	RECQL	100	84.438	Gorilla_gorilla
ENSMUSG00000030243	Recql	98	55.854	ENSHBUG00000001341	recql	99	56.013	Haplochromis_burtoni
ENSMUSG00000030243	Recql	100	85.629	ENSHGLG00000009712	RECQL	100	85.031	Heterocephalus_glaber_female
ENSMUSG00000030243	Recql	98	86.107	ENSHGLG00100015306	RECQL	100	84.806	Heterocephalus_glaber_male
ENSMUSG00000030243	Recql	99	56.822	ENSHCOG00000012735	recql	97	56.822	Hippocampus_comes
ENSMUSG00000030243	Recql	90	59.790	ENSIPUG00000024092	recql	99	53.161	Ictalurus_punctatus
ENSMUSG00000030243	Recql	99	80.841	ENSSTOG00000006328	RECQL	100	80.841	Ictidomys_tridecemlineatus
ENSMUSG00000030243	Recql	98	87.117	ENSJJAG00000017339	Recql	99	85.185	Jaculus_jaculus
ENSMUSG00000030243	Recql	98	54.331	ENSKMAG00000011232	recql	98	54.773	Kryptolebias_marmoratus
ENSMUSG00000030243	Recql	98	55.416	ENSLBEG00000023652	recql	97	56.121	Labrus_bergylta
ENSMUSG00000030243	Recql	99	68.730	ENSLACG00000011482	RECQL	99	68.217	Latimeria_chalumnae
ENSMUSG00000030243	Recql	100	54.167	ENSLOCG00000015393	recql	98	51.772	Lepisosteus_oculatus
ENSMUSG00000030243	Recql	99	83.515	ENSLAFG00000000963	RECQL	99	83.515	Loxodonta_africana
ENSMUSG00000030243	Recql	100	87.425	ENSMFAG00000031470	RECQL	100	85.208	Macaca_fascicularis
ENSMUSG00000030243	Recql	100	87.425	ENSMMUG00000010857	RECQL	100	85.208	Macaca_mulatta
ENSMUSG00000030243	Recql	100	87.425	ENSMNEG00000031827	RECQL	100	85.208	Macaca_nemestrina
ENSMUSG00000030243	Recql	100	87.425	ENSMLEG00000039659	RECQL	99	87.980	Mandrillus_leucophaeus
ENSMUSG00000030243	Recql	95	55.592	ENSMAMG00000023289	recql	97	54.921	Mastacembelus_armatus
ENSMUSG00000030243	Recql	98	55.854	ENSMZEG00005016027	recql	99	56.013	Maylandia_zebra
ENSMUSG00000030243	Recql	99	73.567	ENSMGAG00000013629	RECQL	96	72.939	Meleagris_gallopavo
ENSMUSG00000030243	Recql	100	88.623	ENSMAUG00000010642	Recql	99	90.558	Mesocricetus_auratus
ENSMUSG00000030243	Recql	100	82.036	ENSMICG00000002664	RECQL	99	82.716	Microcebus_murinus
ENSMUSG00000030243	Recql	100	88.024	ENSMOCG00000007093	Recql	100	87.963	Microtus_ochrogaster
ENSMUSG00000030243	Recql	98	55.128	ENSMMOG00000007279	recql	97	55.449	Mola_mola
ENSMUSG00000030243	Recql	98	80.515	ENSMODG00000017805	RECQL	99	78.648	Monodelphis_domestica
ENSMUSG00000030243	Recql	94	56.882	ENSMALG00000004415	recql	94	56.716	Monopterus_albus
ENSMUSG00000030243	Recql	100	97.623	MGP_CAROLIEiJ_G0029030	Recql	100	97.623	Mus_caroli
ENSMUSG00000030243	Recql	100	94.795	MGP_PahariEiJ_G0022791	Recql	100	94.795	Mus_pahari
ENSMUSG00000030243	Recql	100	98.302	MGP_SPRETEiJ_G0030085	Recql	100	98.302	Mus_spretus
ENSMUSG00000030243	Recql	100	82.280	ENSMPUG00000000202	RECQL	100	82.280	Mustela_putorius_furo
ENSMUSG00000030243	Recql	100	82.897	ENSMLUG00000005741	RECQL	100	82.897	Myotis_lucifugus
ENSMUSG00000030243	Recql	100	88.623	ENSNGAG00000010997	-	100	87.809	Nannospalax_galili
ENSMUSG00000030243	Recql	100	77.381	ENSNGAG00000020417	-	98	72.154	Nannospalax_galili
ENSMUSG00000030243	Recql	93	59.022	ENSNBRG00000020825	recql	99	56.398	Neolamprologus_brichardi
ENSMUSG00000030243	Recql	100	87.425	ENSNLEG00000004797	RECQL	100	85.516	Nomascus_leucogenys
ENSMUSG00000030243	Recql	100	85.629	ENSOPRG00000007493	RECQL	100	87.145	Ochotona_princeps
ENSMUSG00000030243	Recql	97	85.668	ENSODEG00000010240	RECQL	100	85.668	Octodon_degus
ENSMUSG00000030243	Recql	96	56.240	ENSONIG00000001694	recql	98	56.240	Oreochromis_niloticus
ENSMUSG00000030243	Recql	56	58.511	ENSOANG00000021930	-	100	46.939	Ornithorhynchus_anatinus
ENSMUSG00000030243	Recql	100	83.677	ENSOCUG00000008787	RECQL	100	83.205	Oryctolagus_cuniculus
ENSMUSG00000030243	Recql	97	55.070	ENSORLG00000012853	recql	97	54.167	Oryzias_latipes
ENSMUSG00000030243	Recql	96	56.381	ENSORLG00020020245	recql	97	56.704	Oryzias_latipes_hni
ENSMUSG00000030243	Recql	96	56.381	ENSORLG00015018708	recql	97	56.704	Oryzias_latipes_hsok
ENSMUSG00000030243	Recql	97	56.480	ENSOMEG00000019484	recql	97	56.640	Oryzias_melastigma
ENSMUSG00000030243	Recql	99	84.341	ENSOGAG00000004754	RECQL	99	84.341	Otolemur_garnettii
ENSMUSG00000030243	Recql	100	83.234	ENSOARG00000020343	RECQL	100	82.280	Ovis_aries
ENSMUSG00000030243	Recql	93	85.714	ENSPPAG00000030306	RECQL	99	82.000	Pan_paniscus
ENSMUSG00000030243	Recql	100	82.716	ENSPPRG00000010371	RECQL	99	82.716	Panthera_pardus
ENSMUSG00000030243	Recql	100	82.716	ENSPTIG00000008593	RECQL	100	82.716	Panthera_tigris_altaica
ENSMUSG00000030243	Recql	100	86.826	ENSPTRG00000004758	RECQL	99	84.615	Pan_troglodytes
ENSMUSG00000030243	Recql	100	87.425	ENSPANG00000003394	RECQL	100	85.362	Papio_anubis
ENSMUSG00000030243	Recql	98	57.595	ENSPKIG00000008072	recql	97	57.595	Paramormyrops_kingsleyae
ENSMUSG00000030243	Recql	95	78.939	ENSPSIG00000002979	RECQL	96	74.923	Pelodiscus_sinensis
ENSMUSG00000030243	Recql	99	54.460	ENSPMGG00000011010	recql	96	54.517	Periophthalmus_magnuspinnatus
ENSMUSG00000030243	Recql	100	91.525	ENSPEMG00000016418	Recql	100	91.525	Peromyscus_maniculatus_bairdii
ENSMUSG00000030243	Recql	100	54.335	ENSPMAG00000005495	recql	100	57.825	Petromyzon_marinus
ENSMUSG00000030243	Recql	99	80.868	ENSPCIG00000022452	RECQL	99	78.867	Phascolarctos_cinereus
ENSMUSG00000030243	Recql	98	57.552	ENSPFOG00000000940	recql	95	57.552	Poecilia_formosa
ENSMUSG00000030243	Recql	98	57.234	ENSPLAG00000006194	recql	95	57.302	Poecilia_latipinna
ENSMUSG00000030243	Recql	99	56.693	ENSPMEG00000013399	recql	96	56.761	Poecilia_mexicana
ENSMUSG00000030243	Recql	98	56.916	ENSPREG00000012991	recql	97	56.984	Poecilia_reticulata
ENSMUSG00000030243	Recql	100	86.228	ENSPPYG00000004352	RECQL	100	84.746	Pongo_abelii
ENSMUSG00000030243	Recql	100	83.832	ENSPCOG00000027353	RECQL	100	83.832	Propithecus_coquereli
ENSMUSG00000030243	Recql	93	84.245	ENSPVAG00000002457	RECQL	93	84.245	Pteropus_vampyrus
ENSMUSG00000030243	Recql	98	55.854	ENSPNYG00000016013	recql	99	56.013	Pundamilia_nyererei
ENSMUSG00000030243	Recql	98	57.430	ENSPNAG00000029317	recql	97	57.430	Pygocentrus_nattereri
ENSMUSG00000030243	Recql	98	88.871	ENSRNOG00000012602	Recql	99	90.119	Rattus_norvegicus
ENSMUSG00000030243	Recql	100	87.425	ENSRBIG00000034966	RECQL	100	84.900	Rhinopithecus_bieti
ENSMUSG00000030243	Recql	100	87.425	ENSRROG00000010234	RECQL	100	84.900	Rhinopithecus_roxellana
ENSMUSG00000030243	Recql	100	86.228	ENSSBOG00000005645	RECQL	100	85.670	Saimiri_boliviensis_boliviensis
ENSMUSG00000030243	Recql	99	80.707	ENSSHAG00000015815	RECQL	99	78.560	Sarcophilus_harrisii
ENSMUSG00000030243	Recql	99	59.718	ENSSFOG00015002537	recql	97	59.718	Scleropages_formosus
ENSMUSG00000030243	Recql	97	55.183	ENSSMAG00000014910	recql	98	55.450	Scophthalmus_maximus
ENSMUSG00000030243	Recql	94	56.672	ENSSDUG00000019205	recql	97	55.608	Seriola_dumerili
ENSMUSG00000030243	Recql	94	56.672	ENSSLDG00000013921	recql	97	55.608	Seriola_lalandi_dorsalis
ENSMUSG00000030243	Recql	90	63.380	ENSSPUG00000018613	RECQL	98	60.258	Sphenodon_punctatus
ENSMUSG00000030243	Recql	97	55.183	ENSSPAG00000008384	recql	98	54.952	Stegastes_partitus
ENSMUSG00000030243	Recql	100	81.664	ENSSSCG00000000580	RECQL	100	83.516	Sus_scrofa
ENSMUSG00000030243	Recql	99	70.788	ENSTGUG00000011730	RECQL	98	70.814	Taeniopygia_guttata
ENSMUSG00000030243	Recql	96	56.271	ENSTRUG00000000534	recql	99	57.168	Takifugu_rubripes
ENSMUSG00000030243	Recql	95	55.629	ENSTNIG00000007242	recql	96	56.126	Tetraodon_nigroviridis
ENSMUSG00000030243	Recql	91	83.012	ENSTBEG00000004653	RECQL	91	83.012	Tupaia_belangeri
ENSMUSG00000030243	Recql	100	81.437	ENSTTRG00000003296	RECQL	90	81.437	Tursiops_truncatus
ENSMUSG00000030243	Recql	100	81.636	ENSUAMG00000003261	RECQL	100	81.636	Ursus_americanus
ENSMUSG00000030243	Recql	100	82.716	ENSUMAG00000001523	RECQL	100	82.716	Ursus_maritimus
ENSMUSG00000030243	Recql	87	86.996	ENSVPAG00000007546	RECQL	89	84.896	Vicugna_pacos
ENSMUSG00000030243	Recql	99	83.441	ENSVVUG00000001101	RECQL	100	82.407	Vulpes_vulpes
ENSMUSG00000030243	Recql	79	69.515	ENSXETG00000013524	recql	99	69.903	Xenopus_tropicalis
ENSMUSG00000030243	Recql	98	56.121	ENSXMAG00000029316	recql	97	56.190	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0000724	double-strand break repair via homologous recombination	21873635.	IBA	Process
GO:0000733	DNA strand renaturation	-	ISO	Process
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003677	DNA binding	21873635.	IBA	Function
GO:0003678	DNA helicase activity	-	ISO	Function
GO:0004386	helicase activity	-	IEA	Function
GO:0005515	protein binding	21873635.	IBA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	21873635.	IBA	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005694	chromosome	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0006281	DNA repair	21873635.	IBA	Process
GO:0006310	DNA recombination	21873635.	IBA	Process
GO:0008026	ATP-dependent helicase activity	-	IEA	Function
GO:0009378	four-way junction helicase activity	21873635.	IBA	Function
GO:0016787	hydrolase activity	-	IEA	Function
GO:0032508	DNA duplex unwinding	21873635.	IBA	Process
GO:0036310	annealing helicase activity	21873635.	IBA	Function
GO:0036310	annealing helicase activity	-	ISO	Function
GO:0043140	ATP-dependent 3'-5' DNA helicase activity	21873635.	IBA	Function