EuRBPDB

Description

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000204433	-	783	-	ENSMUSP00000145261	193 (aa)	-	A0A0N4SVV8
ENSMUST00000134191	-	867	-	ENSMUSP00000116014	198 (aa)	-	D3Z7F0
ENSMUST00000032373	-	1304	-	ENSMUSP00000032373	334 (aa)	-	P16125
ENSMUST00000130817	-	437	-	ENSMUSP00000145467	32 (aa)	-	A0A0N4SWC9

Gene Model

Pathways

Pathway ID	Pathway Name	Source
mmu00010	Glycolysis / Gluconeogenesis	KEGG
mmu00270	Cysteine and methionine metabolism	KEGG
mmu00620	Pyruvate metabolism	KEGG
mmu00640	Propanoate metabolism	KEGG
mmu01100	Metabolic pathways	KEGG
mmu04922	Glucagon signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000030246	Ldhb	100	97.904	ENSG00000111716	LDHB	100	97.904	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003824	catalytic activity	-	IEA	Function
GO:0004457	lactate dehydrogenase activity	-	ISO	Function
GO:0004459	L-lactate dehydrogenase activity	1914521.5764873.	IDA	Function
GO:0004459	L-lactate dehydrogenase activity	-	ISO	Function
GO:0005737	cytoplasm	-	IEA	Component
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005975	carbohydrate metabolic process	-	IEA	Process
GO:0006089	lactate metabolic process	-	ISO	Process
GO:0016491	oxidoreductase activity	-	IEA	Function
GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	-	IEA	Function
GO:0019244	lactate biosynthetic process from pyruvate	1914521.	IC	Process
GO:0019674	NAD metabolic process	-	ISO	Process
GO:0019752	carboxylic acid metabolic process	-	IEA	Process
GO:0019900	kinase binding	-	ISO	Function
GO:0042802	identical protein binding	-	ISO	Function
GO:0043209	myelin sheath	17634366.	HDA	Component
GO:0045121	membrane raft	-	ISO	Component
GO:0051287	NAD binding	-	ISO	Function
GO:0055114	oxidation-reduction process	-	IEA	Process