EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000030411 (Gene tree)
Gene ID: 384569
Gene Symbol: Nova2
Alias: LOC384569
Full Name: neuro-oncological ventral antigen 2
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 39432 bases
Position: chr7:18925888-18965319
Accession: 104296
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000151939	KH_1	PF00013.29	5.7e-47	1	3
ENSMUSP00000151939	KH_1	PF00013.29	5.7e-47	2	3
ENSMUSP00000151939	KH_1	PF00013.29	5.7e-47	3	3
ENSMUSP00000032571	KH_1	PF00013.29	9.4e-47	1	3
ENSMUSP00000032571	KH_1	PF00013.29	9.4e-47	2	3
ENSMUSP00000032571	KH_1	PF00013.29	9.4e-47	3	3

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000220302	-	8372	-	ENSMUSP00000151939	492 (aa)	-	A0A1W2P872
ENSMUST00000032571	-	8372	-	ENSMUSP00000032571	556 (aa)	-	D3YVV7

Gene Model

Click here to download ENSMUSG00000030411's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000030411's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000030411	Nova2	100	67.816	ENSMUSG00000021047	Nova1	79	77.528
ENSMUSG00000030411	Nova2	54	36.765	ENSMUSG00000028034	Fubp1	61	36.765
ENSMUSG00000030411	Nova2	54	37.681	ENSMUSG00000021546	Hnrnpk	57	37.681
ENSMUSG00000030411	Nova2	54	41.538	ENSMUSG00000023495	Pcbp4	91	40.580
ENSMUSG00000030411	Nova2	51	41.558	ENSMUSG00000051695	Pcbp1	66	41.558
ENSMUSG00000030411	Nova2	50	41.096	ENSMUSG00000056851	Pcbp2	88	36.486

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000030411	Nova2	100	98.577	ENSG00000104967	NOVA2	100	100.000	Homo_sapiens
ENSMUSG00000030411	Nova2	68	100.000	ENSAMEG00000000649	NOVA2	93	100.000	Ailuropoda_melanoleuca
ENSMUSG00000030411	Nova2	95	80.932	ENSACAG00000003724	NOVA2	61	89.286	Anolis_carolinensis
ENSMUSG00000030411	Nova2	100	84.553	ENSANAG00000022520	NOVA2	60	85.948	Aotus_nancymaae
ENSMUSG00000030411	Nova2	100	98.577	ENSBTAG00000013157	NOVA2	100	98.577	Bos_taurus
ENSMUSG00000030411	Nova2	100	98.577	ENSCJAG00000012121	NOVA2	100	98.375	Callithrix_jacchus
ENSMUSG00000030411	Nova2	94	98.491	ENSCAFG00000004359	NOVA2	97	93.902	Canis_familiaris
ENSMUSG00000030411	Nova2	100	98.577	ENSCAFG00020001763	NOVA2	75	98.384	Canis_lupus_dingo
ENSMUSG00000030411	Nova2	100	98.577	ENSCHIG00000010547	NOVA2	100	97.482	Capra_hircus
ENSMUSG00000030411	Nova2	69	100.000	ENSCPOG00000020582	NOVA2	90	100.000	Cavia_porcellus
ENSMUSG00000030411	Nova2	100	98.577	ENSCCAG00000037311	NOVA2	96	96.840	Cebus_capucinus
ENSMUSG00000030411	Nova2	100	98.577	ENSCATG00000045122	NOVA2	100	98.577	Cercocebus_atys
ENSMUSG00000030411	Nova2	60	99.219	ENSCLAG00000000991	-	86	99.219	Chinchilla_lanigera
ENSMUSG00000030411	Nova2	100	95.122	ENSCSAG00000003105	NOVA2	100	95.285	Chlorocebus_sabaeus
ENSMUSG00000030411	Nova2	99	81.855	ENSCPBG00000007153	NOVA2	58	89.680	Chrysemys_picta_bellii
ENSMUSG00000030411	Nova2	97	43.927	ENSCSAVG00000009137	-	88	61.176	Ciona_savignyi
ENSMUSG00000030411	Nova2	100	99.797	ENSCGRG00001013374	Nova2	100	97.059	Cricetulus_griseus_chok1gshd
ENSMUSG00000030411	Nova2	94	98.491	ENSDNOG00000031258	NOVA2	99	94.661	Dasypus_novemcinctus
ENSMUSG00000030411	Nova2	100	100.000	ENSDORG00000026568	Nova2	98	100.000	Dipodomys_ordii
ENSMUSG00000030411	Nova2	95	64.026	ENSEBUG00000012405	NOVA2	78	68.929	Eptatretus_burgeri
ENSMUSG00000030411	Nova2	68	55.556	ENSEBUG00000004758	-	84	55.556	Eptatretus_burgeri
ENSMUSG00000030411	Nova2	99	94.888	ENSEASG00005014236	NOVA2	99	94.888	Equus_asinus_asinus
ENSMUSG00000030411	Nova2	67	83.243	ENSECAG00000024041	NOVA2	88	88.211	Equus_caballus
ENSMUSG00000030411	Nova2	100	98.171	ENSFCAG00000024784	NOVA2	100	98.171	Felis_catus
ENSMUSG00000030411	Nova2	95	81.818	ENSGAGG00000009498	NOVA2	61	90.647	Gopherus_agassizii
ENSMUSG00000030411	Nova2	94	94.206	ENSGGOG00000000325	NOVA2	100	94.206	Gorilla_gorilla
ENSMUSG00000030411	Nova2	100	90.447	ENSHGLG00000016103	NOVA2	94	90.447	Heterocephalus_glaber_female
ENSMUSG00000030411	Nova2	59	100.000	ENSHGLG00100015153	NOVA2	100	100.000	Heterocephalus_glaber_male
ENSMUSG00000030411	Nova2	97	96.218	ENSSTOG00000022126	NOVA2	98	98.276	Ictidomys_tridecemlineatus
ENSMUSG00000030411	Nova2	67	97.980	ENSJJAG00000000944	Nova2	100	100.000	Jaculus_jaculus
ENSMUSG00000030411	Nova2	94	95.708	ENSLAFG00000025917	NOVA2	100	95.708	Loxodonta_africana
ENSMUSG00000030411	Nova2	76	100.000	ENSMFAG00000043672	NOVA2	86	100.000	Macaca_fascicularis
ENSMUSG00000030411	Nova2	100	83.943	ENSMMUG00000004085	NOVA2	67	99.673	Macaca_mulatta
ENSMUSG00000030411	Nova2	100	96.341	ENSMNEG00000040253	NOVA2	87	96.341	Macaca_nemestrina
ENSMUSG00000030411	Nova2	97	100.000	ENSMLEG00000030389	NOVA2	100	100.000	Mandrillus_leucophaeus
ENSMUSG00000030411	Nova2	100	91.057	ENSMAUG00000014038	Nova2	100	91.218	Mesocricetus_auratus
ENSMUSG00000030411	Nova2	100	98.577	ENSMICG00000028720	NOVA2	100	98.577	Microcebus_murinus
ENSMUSG00000030411	Nova2	100	100.000	ENSMOCG00000018489	Nova2	95	100.000	Microtus_ochrogaster
ENSMUSG00000030411	Nova2	58	89.583	ENSMODG00000021529	NOVA2	77	89.931	Monodelphis_domestica
ENSMUSG00000030411	Nova2	94	100.000	MGP_CAROLIEiJ_G0029262	-	100	100.000	Mus_caroli
ENSMUSG00000030411	Nova2	94	100.000	MGP_CAROLIEiJ_G0029261	-	100	100.000	Mus_caroli
ENSMUSG00000030411	Nova2	100	100.000	MGP_PahariEiJ_G0021121	-	99	100.000	Mus_pahari
ENSMUSG00000030411	Nova2	100	100.000	MGP_PahariEiJ_G0021122	-	100	100.000	Mus_pahari
ENSMUSG00000030411	Nova2	100	100.000	MGP_SPRETEiJ_G0030346	-	100	100.000	Mus_spretus
ENSMUSG00000030411	Nova2	100	100.000	MGP_SPRETEiJ_G0030345	-	100	100.000	Mus_spretus
ENSMUSG00000030411	Nova2	64	97.753	ENSMPUG00000005444	NOVA2	100	97.753	Mustela_putorius_furo
ENSMUSG00000030411	Nova2	77	100.000	ENSNGAG00000014104	Nova2	95	100.000	Nannospalax_galili
ENSMUSG00000030411	Nova2	76	87.908	ENSNLEG00000002399	-	100	87.908	Nomascus_leucogenys
ENSMUSG00000030411	Nova2	62	79.545	ENSMEUG00000000562	NOVA2	79	79.870	Notamacropus_eugenii
ENSMUSG00000030411	Nova2	61	99.038	ENSOPRG00000010051	NOVA2	68	100.000	Ochotona_princeps
ENSMUSG00000030411	Nova2	100	89.837	ENSODEG00000008485	NOVA2	99	89.921	Octodon_degus
ENSMUSG00000030411	Nova2	100	85.569	ENSOCUG00000022891	NOVA2	100	100.000	Oryctolagus_cuniculus
ENSMUSG00000030411	Nova2	99	98.163	ENSOGAG00000028973	NOVA2	96	97.571	Otolemur_garnettii
ENSMUSG00000030411	Nova2	59	100.000	ENSOARG00000010434	-	72	100.000	Ovis_aries
ENSMUSG00000030411	Nova2	96	97.266	ENSPPAG00000035049	-	100	100.000	Pan_paniscus
ENSMUSG00000030411	Nova2	95	98.507	ENSPPRG00000005941	NOVA2	96	98.507	Panthera_pardus
ENSMUSG00000030411	Nova2	61	100.000	ENSPTIG00000015368	NOVA2	64	100.000	Panthera_tigris_altaica
ENSMUSG00000030411	Nova2	100	98.577	ENSPTRG00000011173	NOVA2	100	98.577	Pan_troglodytes
ENSMUSG00000030411	Nova2	94	98.488	ENSPANG00000023868	NOVA2	96	98.488	Papio_anubis
ENSMUSG00000030411	Nova2	55	95.105	ENSPSIG00000006125	-	85	95.105	Pelodiscus_sinensis
ENSMUSG00000030411	Nova2	62	95.455	ENSPCIG00000007632	NOVA2	59	95.779	Phascolarctos_cinereus
ENSMUSG00000030411	Nova2	84	91.768	ENSPPYG00000010139	-	99	91.768	Pongo_abelii
ENSMUSG00000030411	Nova2	100	95.122	ENSPCOG00000022693	NOVA2	98	98.073	Propithecus_coquereli
ENSMUSG00000030411	Nova2	98	93.347	ENSPVAG00000006169	NOVA2	100	93.347	Pteropus_vampyrus
ENSMUSG00000030411	Nova2	99	99.184	ENSRNOG00000013847	Nova2	99	99.184	Rattus_norvegicus
ENSMUSG00000030411	Nova2	70	100.000	ENSRROG00000037399	NOVA2	78	100.000	Rhinopithecus_roxellana
ENSMUSG00000030411	Nova2	60	87.500	ENSSBOG00000001000	-	84	87.500	Saimiri_boliviensis_boliviensis
ENSMUSG00000030411	Nova2	78	92.135	ENSSPUG00000002591	NOVA2	94	88.542	Sphenodon_punctatus
ENSMUSG00000030411	Nova2	100	98.171	ENSSSCG00000035029	NOVA2	100	98.171	Sus_scrofa
ENSMUSG00000030411	Nova2	100	79.677	ENSTRUG00000019498	NOVA2	96	87.500	Takifugu_rubripes
ENSMUSG00000030411	Nova2	97	95.642	ENSTTRG00000001612	NOVA2	100	95.642	Tursiops_truncatus
ENSMUSG00000030411	Nova2	62	99.673	ENSUAMG00000015647	NOVA2	68	99.673	Ursus_americanus
ENSMUSG00000030411	Nova2	60	98.374	ENSVVUG00000002971	-	57	98.374	Vulpes_vulpes
ENSMUSG00000030411	Nova2	100	58.635	ENSXETG00000019101	nova2	89	81.443	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	9789075.	IDA	Function
GO:0005515	protein binding	10829067.	IPI	Function
GO:0051252	regulation of RNA metabolic process	23359859.	IGI	Process
GO:0120163	negative regulation of cold-induced thermogenesis	27635635.	IGI	Process