EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000030423 (Gene tree)
Gene ID: 66161
Gene Symbol: Pop4
Alias: 1110023P21Rik|Rpp29
Full Name: processing of precursor 4%2C ribonuclease P/MRP family%2C (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 9428 bases
Position: chr7:38261996-38271423
Accession: 1913411
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000032585	UPF0086	PF01868.16	3.3e-26	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000032585	-	2113	XM_006540287	ENSMUSP00000032585	221 (aa)	XP_006540350	Q9CR08
ENSMUST00000206221	-	892	-	ENSMUSP00000145810	81 (aa)	-	A0A0U1RP33
ENSMUST00000205753	-	591	-	ENSMUSP00000146119	81 (aa)	-	A0A0U1RP33
ENSMUST00000205899	-	793	-	ENSMUSP00000146204	66 (aa)	-	A0A0U1RQ13
ENSMUST00000205959	-	816	-	-	- (aa)	-	-
ENSMUST00000206045	-	724	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000030423's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03008	Ribosome biogenesis in eukaryotes	KEGG
mmu03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000030423's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000030423	Pop4	100	82.353	ENSG00000105171	POP4	100	90.625	Homo_sapiens
ENSMUSG00000030423	Pop4	99	79.452	ENSAMEG00000018329	-	99	79.909	Ailuropoda_melanoleuca
ENSMUSG00000030423	Pop4	97	72.222	ENSAMEG00000003172	-	97	72.222	Ailuropoda_melanoleuca
ENSMUSG00000030423	Pop4	93	60.488	ENSACIG00000008358	pop4	97	60.488	Amphilophus_citrinellus
ENSMUSG00000030423	Pop4	89	64.467	ENSAOCG00000010116	pop4	96	64.467	Amphiprion_ocellaris
ENSMUSG00000030423	Pop4	92	61.951	ENSAPEG00000002829	pop4	86	61.951	Amphiprion_percula
ENSMUSG00000030423	Pop4	92	62.745	ENSATEG00000013028	pop4	92	62.745	Anabas_testudineus
ENSMUSG00000030423	Pop4	90	71.717	ENSAPLG00000014051	POP4	95	72.222	Anas_platyrhynchos
ENSMUSG00000030423	Pop4	100	82.805	ENSANAG00000020295	POP4	100	83.258	Aotus_nancymaae
ENSMUSG00000030423	Pop4	92	61.576	ENSACLG00000000526	pop4	91	61.576	Astatotilapia_calliptera
ENSMUSG00000030423	Pop4	100	59.276	ENSAMXG00000002899	pop4	100	59.276	Astyanax_mexicanus
ENSMUSG00000030423	Pop4	100	83.710	ENSBTAG00000002223	POP4	100	84.163	Bos_taurus
ENSMUSG00000030423	Pop4	100	82.353	ENSCJAG00000046750	POP4	100	85.000	Callithrix_jacchus
ENSMUSG00000030423	Pop4	83	83.060	ENSCAFG00000007630	POP4	100	83.607	Canis_familiaris
ENSMUSG00000030423	Pop4	100	83.258	ENSCHIG00000016743	POP4	100	83.710	Capra_hircus
ENSMUSG00000030423	Pop4	100	82.353	ENSTSYG00000003488	POP4	100	82.805	Carlito_syrichta
ENSMUSG00000030423	Pop4	99	62.844	ENSCAPG00000011105	POP4	100	63.303	Cavia_aperea
ENSMUSG00000030423	Pop4	100	84.615	ENSCPOG00000002992	POP4	100	85.068	Cavia_porcellus
ENSMUSG00000030423	Pop4	100	82.805	ENSCCAG00000020285	-	100	82.805	Cebus_capucinus
ENSMUSG00000030423	Pop4	100	71.493	ENSCCAG00000034244	-	100	71.493	Cebus_capucinus
ENSMUSG00000030423	Pop4	100	83.710	ENSCATG00000036022	POP4	100	92.708	Cercocebus_atys
ENSMUSG00000030423	Pop4	100	83.710	ENSCLAG00000013162	POP4	100	84.163	Chinchilla_lanigera
ENSMUSG00000030423	Pop4	99	83.105	ENSCSAG00000004868	POP4	100	83.562	Chlorocebus_sabaeus
ENSMUSG00000030423	Pop4	99	62.385	ENSCHOG00000002071	POP4	100	62.844	Choloepus_hoffmanni
ENSMUSG00000030423	Pop4	100	68.778	ENSCPBG00000016132	POP4	100	68.778	Chrysemys_picta_bellii
ENSMUSG00000030423	Pop4	84	31.937	ENSCING00000023871	-	94	32.984	Ciona_intestinalis
ENSMUSG00000030423	Pop4	90	84.925	ENSCANG00000005924	POP4	98	85.427	Colobus_angolensis_palliatus
ENSMUSG00000030423	Pop4	100	90.950	ENSCGRG00001017185	Pop4	100	90.950	Cricetulus_griseus_chok1gshd
ENSMUSG00000030423	Pop4	100	90.950	ENSCGRG00000008155	Pop4	100	90.950	Cricetulus_griseus_crigri
ENSMUSG00000030423	Pop4	92	54.412	ENSCSEG00000002946	pop4	92	54.412	Cynoglossus_semilaevis
ENSMUSG00000030423	Pop4	89	46.701	ENSCVAG00000018602	POP4	85	44.898	Cyprinodon_variegatus
ENSMUSG00000030423	Pop4	88	63.636	ENSDARG00000101472	pop4	88	64.796	Danio_rerio
ENSMUSG00000030423	Pop4	100	81.900	ENSDNOG00000047663	POP4	88	82.353	Dasypus_novemcinctus
ENSMUSG00000030423	Pop4	78	82.558	ENSDORG00000008577	Pop4	99	82.558	Dipodomys_ordii
ENSMUSG00000030423	Pop4	86	32.338	FBgn0035831	CG8038	96	32.338	Drosophila_melanogaster
ENSMUSG00000030423	Pop4	98	68.203	ENSETEG00000003607	POP4	99	68.203	Echinops_telfairi
ENSMUSG00000030423	Pop4	91	48.624	ENSEBUG00000010447	pop4	83	49.533	Eptatretus_burgeri
ENSMUSG00000030423	Pop4	100	42.616	ENSEBUG00000004305	pop4	100	43.348	Eptatretus_burgeri
ENSMUSG00000030423	Pop4	100	46.429	ENSEBUG00000008575	pop4	100	46.429	Eptatretus_burgeri
ENSMUSG00000030423	Pop4	100	82.692	ENSECAG00000020206	POP4	78	82.692	Equus_caballus
ENSMUSG00000030423	Pop4	90	61.111	ENSEEUG00000013109	POP4	99	61.616	Erinaceus_europaeus
ENSMUSG00000030423	Pop4	88	63.077	ENSELUG00000019812	pop4	88	64.615	Esox_lucius
ENSMUSG00000030423	Pop4	100	81.900	ENSFCAG00000001619	POP4	100	82.805	Felis_catus
ENSMUSG00000030423	Pop4	98	67.281	ENSFALG00000000206	POP4	96	67.281	Ficedula_albicollis
ENSMUSG00000030423	Pop4	100	84.163	ENSFDAG00000017859	POP4	100	84.615	Fukomys_damarensis
ENSMUSG00000030423	Pop4	90	56.000	ENSFHEG00000012745	pop4	90	56.000	Fundulus_heteroclitus
ENSMUSG00000030423	Pop4	90	62.189	ENSGMOG00000000335	pop4	98	62.189	Gadus_morhua
ENSMUSG00000030423	Pop4	100	65.158	ENSGALG00000041972	POP4	92	65.158	Gallus_gallus
ENSMUSG00000030423	Pop4	79	54.237	ENSGAFG00000003571	pop4	98	54.237	Gambusia_affinis
ENSMUSG00000030423	Pop4	92	58.852	ENSGACG00000014510	pop4	98	63.889	Gasterosteus_aculeatus
ENSMUSG00000030423	Pop4	100	69.683	ENSGAGG00000024544	POP4	79	70.136	Gopherus_agassizii
ENSMUSG00000030423	Pop4	99	82.648	ENSGGOG00000038346	POP4	99	83.105	Gorilla_gorilla
ENSMUSG00000030423	Pop4	92	61.576	ENSHBUG00000021821	pop4	91	61.576	Haplochromis_burtoni
ENSMUSG00000030423	Pop4	99	85.388	ENSHGLG00000015798	POP4	99	85.845	Heterocephalus_glaber_female
ENSMUSG00000030423	Pop4	100	85.068	ENSHGLG00100009737	POP4	100	85.520	Heterocephalus_glaber_male
ENSMUSG00000030423	Pop4	89	64.796	ENSHCOG00000020937	pop4	88	64.796	Hippocampus_comes
ENSMUSG00000030423	Pop4	100	57.466	ENSIPUG00000013652	pop4	100	57.466	Ictalurus_punctatus
ENSMUSG00000030423	Pop4	100	84.615	ENSSTOG00000011016	POP4	100	85.068	Ictidomys_tridecemlineatus
ENSMUSG00000030423	Pop4	100	85.973	ENSJJAG00000013376	Pop4	100	86.425	Jaculus_jaculus
ENSMUSG00000030423	Pop4	99	60.889	ENSKMAG00000012250	pop4	99	60.889	Kryptolebias_marmoratus
ENSMUSG00000030423	Pop4	99	56.306	ENSLBEG00000014139	pop4	99	56.561	Labrus_bergylta
ENSMUSG00000030423	Pop4	99	55.856	ENSLBEG00000018846	-	99	56.109	Labrus_bergylta
ENSMUSG00000030423	Pop4	99	63.303	ENSLACG00000008581	POP4	98	63.303	Latimeria_chalumnae
ENSMUSG00000030423	Pop4	100	64.706	ENSLOCG00000005597	pop4	100	65.766	Lepisosteus_oculatus
ENSMUSG00000030423	Pop4	100	83.258	ENSLAFG00000000084	POP4	100	83.710	Loxodonta_africana
ENSMUSG00000030423	Pop4	100	83.258	ENSMFAG00000029606	POP4	100	83.710	Macaca_fascicularis
ENSMUSG00000030423	Pop4	100	82.805	ENSMMUG00000017424	POP4	100	82.805	Macaca_mulatta
ENSMUSG00000030423	Pop4	100	82.805	ENSMNEG00000031374	POP4	100	82.805	Macaca_nemestrina
ENSMUSG00000030423	Pop4	100	82.805	ENSMLEG00000043454	POP4	100	83.258	Mandrillus_leucophaeus
ENSMUSG00000030423	Pop4	85	65.957	ENSMAMG00000011716	pop4	92	63.636	Mastacembelus_armatus
ENSMUSG00000030423	Pop4	92	61.576	ENSMZEG00005002360	pop4	91	61.576	Maylandia_zebra
ENSMUSG00000030423	Pop4	99	64.840	ENSMGAG00000005337	POP4	97	64.840	Meleagris_gallopavo
ENSMUSG00000030423	Pop4	100	90.498	ENSMAUG00000020110	Pop4	100	90.498	Mesocricetus_auratus
ENSMUSG00000030423	Pop4	99	79.909	ENSMICG00000035730	POP4	98	79.909	Microcebus_murinus
ENSMUSG00000030423	Pop4	99	59.091	ENSMMOG00000015321	pop4	99	59.091	Mola_mola
ENSMUSG00000030423	Pop4	99	77.064	ENSMODG00000029406	POP4	94	77.064	Monodelphis_domestica
ENSMUSG00000030423	Pop4	94	63.462	ENSMALG00000012571	pop4	94	63.462	Monopterus_albus
ENSMUSG00000030423	Pop4	100	98.643	MGP_CAROLIEiJ_G0029600	Pop4	100	98.643	Mus_caroli
ENSMUSG00000030423	Pop4	100	98.643	MGP_SPRETEiJ_G0030699	Pop4	100	98.643	Mus_spretus
ENSMUSG00000030423	Pop4	100	80.995	ENSMPUG00000008041	-	100	81.448	Mustela_putorius_furo
ENSMUSG00000030423	Pop4	100	70.721	ENSMPUG00000008063	-	100	71.171	Mustela_putorius_furo
ENSMUSG00000030423	Pop4	99	63.182	ENSMLUG00000010774	POP4	99	63.182	Myotis_lucifugus
ENSMUSG00000030423	Pop4	57	81.600	ENSMEUG00000003636	-	100	81.600	Notamacropus_eugenii
ENSMUSG00000030423	Pop4	90	87.500	ENSOPRG00000004736	POP4	99	87.500	Ochotona_princeps
ENSMUSG00000030423	Pop4	99	84.018	ENSODEG00000013025	POP4	100	85.446	Octodon_degus
ENSMUSG00000030423	Pop4	92	61.084	ENSONIG00000003458	pop4	90	61.084	Oreochromis_niloticus
ENSMUSG00000030423	Pop4	100	83.710	ENSOCUG00000015974	POP4	100	84.615	Oryctolagus_cuniculus
ENSMUSG00000030423	Pop4	90	60.294	ENSORLG00000020317	pop4	92	60.294	Oryzias_latipes
ENSMUSG00000030423	Pop4	92	59.024	ENSORLG00015011624	pop4	92	59.024	Oryzias_latipes_hsok
ENSMUSG00000030423	Pop4	90	62.814	ENSOMEG00000002538	pop4	89	62.814	Oryzias_melastigma
ENSMUSG00000030423	Pop4	99	84.018	ENSOGAG00000011168	POP4	99	84.018	Otolemur_garnettii
ENSMUSG00000030423	Pop4	100	82.883	ENSOARG00000004041	POP4	100	83.333	Ovis_aries
ENSMUSG00000030423	Pop4	100	82.805	ENSPPAG00000040372	POP4	100	83.258	Pan_paniscus
ENSMUSG00000030423	Pop4	100	81.900	ENSPPRG00000010502	POP4	100	82.805	Panthera_pardus
ENSMUSG00000030423	Pop4	100	81.900	ENSPTIG00000016598	POP4	100	82.805	Panthera_tigris_altaica
ENSMUSG00000030423	Pop4	100	82.805	ENSPTRG00000010779	POP4	100	83.258	Pan_troglodytes
ENSMUSG00000030423	Pop4	100	83.258	ENSPANG00000008546	POP4	100	83.710	Papio_anubis
ENSMUSG00000030423	Pop4	89	66.667	ENSPKIG00000004468	pop4	87	66.667	Paramormyrops_kingsleyae
ENSMUSG00000030423	Pop4	100	70.136	ENSPSIG00000015690	POP4	98	74.874	Pelodiscus_sinensis
ENSMUSG00000030423	Pop4	90	56.650	ENSPMGG00000008608	pop4	97	57.635	Periophthalmus_magnuspinnatus
ENSMUSG00000030423	Pop4	100	90.498	ENSPEMG00000014034	-	96	90.498	Peromyscus_maniculatus_bairdii
ENSMUSG00000030423	Pop4	99	75.342	ENSPEMG00000019982	-	100	76.256	Peromyscus_maniculatus_bairdii
ENSMUSG00000030423	Pop4	66	65.517	ENSPMAG00000006265	pop4	100	53.769	Petromyzon_marinus
ENSMUSG00000030423	Pop4	100	77.376	ENSPCIG00000024738	POP4	95	77.376	Phascolarctos_cinereus
ENSMUSG00000030423	Pop4	89	61.735	ENSPFOG00000000925	pop4	88	61.735	Poecilia_formosa
ENSMUSG00000030423	Pop4	89	61.735	ENSPLAG00000003161	pop4	88	61.735	Poecilia_latipinna
ENSMUSG00000030423	Pop4	89	61.735	ENSPMEG00000002475	pop4	88	61.735	Poecilia_mexicana
ENSMUSG00000030423	Pop4	92	59.606	ENSPREG00000022403	pop4	88	59.606	Poecilia_reticulata
ENSMUSG00000030423	Pop4	100	83.258	ENSPPYG00000009805	POP4	100	83.710	Pongo_abelii
ENSMUSG00000030423	Pop4	99	75.455	ENSPCAG00000007737	POP4	99	75.455	Procavia_capensis
ENSMUSG00000030423	Pop4	100	82.353	ENSPCOG00000018055	POP4	100	82.805	Propithecus_coquereli
ENSMUSG00000030423	Pop4	100	79.186	ENSPVAG00000006069	POP4	100	79.186	Pteropus_vampyrus
ENSMUSG00000030423	Pop4	92	61.576	ENSPNYG00000020038	pop4	91	61.576	Pundamilia_nyererei
ENSMUSG00000030423	Pop4	88	65.128	ENSPNAG00000005591	pop4	88	65.128	Pygocentrus_nattereri
ENSMUSG00000030423	Pop4	100	95.475	ENSRNOG00000027646	Pop4	100	95.475	Rattus_norvegicus
ENSMUSG00000030423	Pop4	80	80.114	ENSRBIG00000044769	POP4	89	83.453	Rhinopithecus_bieti
ENSMUSG00000030423	Pop4	100	83.258	ENSRROG00000028903	POP4	100	83.710	Rhinopithecus_roxellana
ENSMUSG00000030423	Pop4	57	33.813	YBR257W	-	50	33.813	Saccharomyces_cerevisiae
ENSMUSG00000030423	Pop4	100	83.258	ENSSBOG00000032445	POP4	100	83.258	Saimiri_boliviensis_boliviensis
ENSMUSG00000030423	Pop4	98	76.037	ENSSHAG00000016888	POP4	98	76.037	Sarcophilus_harrisii
ENSMUSG00000030423	Pop4	92	64.532	ENSSFOG00015014556	pop4	90	64.532	Scleropages_formosus
ENSMUSG00000030423	Pop4	90	64.824	ENSSMAG00000016611	pop4	93	64.824	Scophthalmus_maximus
ENSMUSG00000030423	Pop4	92	61.765	ENSSDUG00000019865	pop4	82	61.765	Seriola_dumerili
ENSMUSG00000030423	Pop4	96	60.748	ENSSLDG00000001763	pop4	92	60.748	Seriola_lalandi_dorsalis
ENSMUSG00000030423	Pop4	98	84.793	ENSSARG00000004748	POP4	99	84.793	Sorex_araneus
ENSMUSG00000030423	Pop4	99	61.261	ENSSPAG00000014364	pop4	99	61.261	Stegastes_partitus
ENSMUSG00000030423	Pop4	100	84.163	ENSSSCG00000002854	POP4	100	84.615	Sus_scrofa
ENSMUSG00000030423	Pop4	90	71.357	ENSTGUG00000008953	POP4	99	71.357	Taeniopygia_guttata
ENSMUSG00000030423	Pop4	92	59.709	ENSTNIG00000006401	pop4	100	59.709	Tetraodon_nigroviridis
ENSMUSG00000030423	Pop4	100	84.163	ENSTBEG00000002194	POP4	100	84.163	Tupaia_belangeri
ENSMUSG00000030423	Pop4	100	80.995	ENSTTRG00000005882	POP4	100	81.448	Tursiops_truncatus
ENSMUSG00000030423	Pop4	100	80.090	ENSUAMG00000003049	-	100	80.543	Ursus_americanus
ENSMUSG00000030423	Pop4	100	80.090	ENSUMAG00000007522	-	100	80.543	Ursus_maritimus
ENSMUSG00000030423	Pop4	92	81.773	ENSVVUG00000016876	-	71	81.773	Vulpes_vulpes
ENSMUSG00000030423	Pop4	98	67.281	ENSXETG00000017598	pop4	98	67.281	Xenopus_tropicalis
ENSMUSG00000030423	Pop4	92	60.488	ENSXCOG00000017695	pop4	88	60.488	Xiphophorus_couchianus
ENSMUSG00000030423	Pop4	92	60.488	ENSXMAG00000013862	pop4	88	60.488	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000171	ribonuclease MRP activity	21873635.	IBA	Function
GO:0000172	ribonuclease MRP complex	21873635.	IBA	Component
GO:0001682	tRNA 5'-leader removal	-	ISO	Process
GO:0003723	RNA binding	-	IEA	Function
GO:0004526	ribonuclease P activity	21873635.	IBA	Function
GO:0004526	ribonuclease P activity	-	ISO	Function
GO:0004540	ribonuclease activity	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0006364	rRNA processing	21873635.	IBA	Process
GO:0006396	RNA processing	-	IEA	Process
GO:0008033	tRNA processing	-	IEA	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0030677	ribonuclease P complex	21873635.	IBA	Component
GO:0030681	multimeric ribonuclease P complex	-	ISO	Component
GO:0033204	ribonuclease P RNA binding	21873635.	IBA	Function