EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000030486 (Gene tree)
Gene ID: 54678
Gene Symbol: Zfp108
Alias: -
Full Name: zinc finger protein 108
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 7652 bases
Position: chr7:24254794-24262445
Accession: 1891198
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000072496	zf-C2H2	PF00096.26	9.9e-66	1	12
ENSMUSP00000072496	zf-C2H2	PF00096.26	9.9e-66	2	12
ENSMUSP00000072496	zf-C2H2	PF00096.26	9.9e-66	3	12
ENSMUSP00000072496	zf-C2H2	PF00096.26	9.9e-66	4	12
ENSMUSP00000072496	zf-C2H2	PF00096.26	9.9e-66	5	12
ENSMUSP00000072496	zf-C2H2	PF00096.26	9.9e-66	6	12
ENSMUSP00000072496	zf-C2H2	PF00096.26	9.9e-66	7	12
ENSMUSP00000072496	zf-C2H2	PF00096.26	9.9e-66	8	12
ENSMUSP00000072496	zf-C2H2	PF00096.26	9.9e-66	9	12
ENSMUSP00000072496	zf-C2H2	PF00096.26	9.9e-66	10	12
ENSMUSP00000072496	zf-C2H2	PF00096.26	9.9e-66	11	12
ENSMUSP00000072496	zf-C2H2	PF00096.26	9.9e-66	12	12
ENSMUSP00000145844	zf-C2H2	PF00096.26	9.9e-66	1	12
ENSMUSP00000145844	zf-C2H2	PF00096.26	9.9e-66	2	12
ENSMUSP00000145844	zf-C2H2	PF00096.26	9.9e-66	3	12
ENSMUSP00000145844	zf-C2H2	PF00096.26	9.9e-66	4	12
ENSMUSP00000145844	zf-C2H2	PF00096.26	9.9e-66	5	12
ENSMUSP00000145844	zf-C2H2	PF00096.26	9.9e-66	6	12
ENSMUSP00000145844	zf-C2H2	PF00096.26	9.9e-66	7	12
ENSMUSP00000145844	zf-C2H2	PF00096.26	9.9e-66	8	12
ENSMUSP00000145844	zf-C2H2	PF00096.26	9.9e-66	9	12
ENSMUSP00000145844	zf-C2H2	PF00096.26	9.9e-66	10	12
ENSMUSP00000145844	zf-C2H2	PF00096.26	9.9e-66	11	12
ENSMUSP00000145844	zf-C2H2	PF00096.26	9.9e-66	12	12
ENSMUSP00000145928	zf-C2H2	PF00096.26	9.9e-66	1	12
ENSMUSP00000145928	zf-C2H2	PF00096.26	9.9e-66	2	12
ENSMUSP00000145928	zf-C2H2	PF00096.26	9.9e-66	3	12
ENSMUSP00000145928	zf-C2H2	PF00096.26	9.9e-66	4	12
ENSMUSP00000145928	zf-C2H2	PF00096.26	9.9e-66	5	12
ENSMUSP00000145928	zf-C2H2	PF00096.26	9.9e-66	6	12
ENSMUSP00000145928	zf-C2H2	PF00096.26	9.9e-66	7	12
ENSMUSP00000145928	zf-C2H2	PF00096.26	9.9e-66	8	12
ENSMUSP00000145928	zf-C2H2	PF00096.26	9.9e-66	9	12
ENSMUSP00000145928	zf-C2H2	PF00096.26	9.9e-66	10	12
ENSMUSP00000145928	zf-C2H2	PF00096.26	9.9e-66	11	12
ENSMUSP00000145928	zf-C2H2	PF00096.26	9.9e-66	12	12
ENSMUSP00000072496	zf-met	PF12874.7	1.3e-09	1	1
ENSMUSP00000145844	zf-met	PF12874.7	1.3e-09	1	1
ENSMUSP00000145928	zf-met	PF12874.7	1.3e-09	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000205982	-	2577	-	ENSMUSP00000145844	642 (aa)	-	Q8CCP6
ENSMUST00000206777	-	2562	XM_017322372	ENSMUSP00000145928	642 (aa)	XP_017177861	Q8CCP6
ENSMUST00000072713	-	1929	XM_017322371	ENSMUSP00000072496	642 (aa)	XP_017177860	E9Q8I5

Gene Model

Click here to download ENSMUSG00000030486's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000030486's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000030486	Zfp108	99	43.514	ENSMUSG00000114923	Gm49345	99	46.961
ENSMUSG00000030486	Zfp108	99	47.111	ENSMUSG00000062743	Zfp677	99	47.111
ENSMUSG00000030486	Zfp108	77	43.095	ENSMUSG00000070709	Zfp974	94	43.883
ENSMUSG00000030486	Zfp108	99	50.696	ENSMUSG00000048728	Zfp454	98	50.167
ENSMUSG00000030486	Zfp108	99	45.455	ENSMUSG00000030823	9130019O22Rik	91	45.455
ENSMUSG00000030486	Zfp108	99	68.421	ENSMUSG00000068962	Zfp114	99	68.421
ENSMUSG00000030486	Zfp108	79	54.545	ENSMUSG00000095432	Zfp748	99	54.545
ENSMUSG00000030486	Zfp108	99	43.564	ENSMUSG00000017667	Zfp334	73	52.083
ENSMUSG00000030486	Zfp108	77	55.814	ENSMUSG00000074824	Rslcan18	79	55.814
ENSMUSG00000030486	Zfp108	99	35.846	ENSMUSG00000092416	Zfp141	98	38.971
ENSMUSG00000030486	Zfp108	99	47.765	ENSMUSG00000063108	Zfp26	90	47.765
ENSMUSG00000030486	Zfp108	99	44.159	ENSMUSG00000059142	Zfp945	99	44.159
ENSMUSG00000030486	Zfp108	99	47.619	ENSMUSG00000023892	Zfp51	94	47.619
ENSMUSG00000030486	Zfp108	99	57.908	ENSMUSG00000052675	Zfp112	99	57.908
ENSMUSG00000030486	Zfp108	79	55.556	ENSMUSG00000058402	Zfp420	99	55.556
ENSMUSG00000030486	Zfp108	77	54.902	ENSMUSG00000091474	2610021A01Rik	70	54.902
ENSMUSG00000030486	Zfp108	71	45.176	ENSMUSG00000012640	Zfp715	67	47.268
ENSMUSG00000030486	Zfp108	99	49.747	ENSMUSG00000022526	Zfp251	92	49.747
ENSMUSG00000030486	Zfp108	99	42.787	ENSMUSG00000057396	Zfp759	100	42.787
ENSMUSG00000030486	Zfp108	68	49.206	ENSMUSG00000074472	Zfp872	86	49.206
ENSMUSG00000030486	Zfp108	99	45.455	ENSMUSG00000020364	Zfp354a	98	45.455
ENSMUSG00000030486	Zfp108	99	44.652	ENSMUSG00000089857	Zfp882	99	46.400
ENSMUSG00000030486	Zfp108	99	62.162	ENSMUSG00000087598	Zfp111	99	62.162
ENSMUSG00000030486	Zfp108	99	53.678	ENSMUSG00000069743	Zfp820	98	53.678
ENSMUSG00000030486	Zfp108	99	81.550	ENSMUSG00000055305	Zfp93	100	81.550
ENSMUSG00000030486	Zfp108	99	57.846	ENSMUSG00000074282	Zfp94	97	52.756
ENSMUSG00000030486	Zfp108	69	53.957	ENSMUSG00000047371	Zfp768	51	53.521
ENSMUSG00000030486	Zfp108	74	35.854	ENSMUSG00000052751	Repin1	94	40.367
ENSMUSG00000030486	Zfp108	71	47.443	ENSMUSG00000054519	Zfp867	95	53.659
ENSMUSG00000030486	Zfp108	99	52.439	ENSMUSG00000056019	Zfp709	90	59.524
ENSMUSG00000030486	Zfp108	99	51.133	ENSMUSG00000050605	Zfp61	99	51.133
ENSMUSG00000030486	Zfp108	69	41.564	ENSMUSG00000049755	Zfp672	90	50.746
ENSMUSG00000030486	Zfp108	99	75.259	ENSMUSG00000047603	Zfp235	100	63.407
ENSMUSG00000030486	Zfp108	99	46.933	ENSMUSG00000057551	Zfp317	90	45.423

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000030486	Zfp108	100	50.784	ENSG00000159915	ZNF233	99	49.361	Homo_sapiens
ENSMUSG00000030486	Zfp108	99	49.708	ENSAMEG00000006122	ZNF233	99	50.554	Ailuropoda_melanoleuca
ENSMUSG00000030486	Zfp108	100	43.906	ENSCATG00000015076	ZNF233	99	43.906	Cercocebus_atys
ENSMUSG00000030486	Zfp108	99	51.156	ENSCSAG00000003326	ZNF233	99	51.156	Chlorocebus_sabaeus
ENSMUSG00000030486	Zfp108	99	53.020	ENSCHOG00000010443	ZNF233	99	54.104	Choloepus_hoffmanni
ENSMUSG00000030486	Zfp108	100	49.741	ENSCANG00000032081	ZNF233	99	51.938	Colobus_angolensis_palliatus
ENSMUSG00000030486	Zfp108	99	58.996	ENSCGRG00000015809	-	99	58.996	Cricetulus_griseus_crigri
ENSMUSG00000030486	Zfp108	99	56.240	ENSCGRG00000015629	-	95	56.240	Cricetulus_griseus_crigri
ENSMUSG00000030486	Zfp108	99	53.939	ENSDNOG00000038729	ZNF233	99	51.695	Dasypus_novemcinctus
ENSMUSG00000030486	Zfp108	58	54.762	ENSFALG00000009044	-	100	54.762	Ficedula_albicollis
ENSMUSG00000030486	Zfp108	93	50.867	ENSGGOG00000013940	ZNF233	96	50.867	Gorilla_gorilla
ENSMUSG00000030486	Zfp108	100	63.348	ENSMFAG00000039215	ZNF233	99	45.672	Macaca_fascicularis
ENSMUSG00000030486	Zfp108	100	63.348	ENSMMUG00000012797	ZNF233	99	52.030	Macaca_mulatta
ENSMUSG00000030486	Zfp108	66	51.724	ENSMZEG00005024630	-	83	51.724	Maylandia_zebra
ENSMUSG00000030486	Zfp108	100	55.932	ENSMICG00000016725	ZNF233	99	55.932	Microcebus_murinus
ENSMUSG00000030486	Zfp108	100	94.548	MGP_CAROLIEiJ_G0029326	Zfp108	99	94.548	Mus_caroli
ENSMUSG00000030486	Zfp108	93	79.270	MGP_CAROLIEiJ_G0029327	Zfp93	99	79.270	Mus_caroli
ENSMUSG00000030486	Zfp108	99	76.000	MGP_CAROLIEiJ_G0029322	Zfp235	100	64.148	Mus_caroli
ENSMUSG00000030486	Zfp108	99	75.852	MGP_PahariEiJ_G0021173	Zfp235	100	64.000	Mus_pahari
ENSMUSG00000030486	Zfp108	100	89.720	MGP_PahariEiJ_G0021177	Zfp108	99	89.720	Mus_pahari
ENSMUSG00000030486	Zfp108	93	77.759	MGP_PahariEiJ_G0021178	Zfp93	99	83.771	Mus_pahari
ENSMUSG00000030486	Zfp108	71	85.442	MGP_SPRETEiJ_G0030421	-	99	85.442	Mus_spretus
ENSMUSG00000030486	Zfp108	100	96.729	MGP_SPRETEiJ_G0030420	Zfp108	100	96.729	Mus_spretus
ENSMUSG00000030486	Zfp108	91	64.984	MGP_SPRETEiJ_G0030417	Zfp114	99	64.506	Mus_spretus
ENSMUSG00000030486	Zfp108	99	75.111	MGP_SPRETEiJ_G0030416	Zfp235	100	63.259	Mus_spretus
ENSMUSG00000030486	Zfp108	66	53.704	ENSORLG00015017539	-	73	51.754	Oryzias_latipes_hsok
ENSMUSG00000030486	Zfp108	99	47.478	ENSOGAG00000001912	ZNF233	100	47.478	Otolemur_garnettii
ENSMUSG00000030486	Zfp108	100	49.185	ENSPPAG00000030145	ZNF233	99	51.875	Pan_paniscus
ENSMUSG00000030486	Zfp108	100	49.457	ENSPTRG00000011111	ZNF233	99	51.875	Pan_troglodytes
ENSMUSG00000030486	Zfp108	100	51.724	ENSPANG00000010670	ZNF233	99	52.399	Papio_anubis
ENSMUSG00000030486	Zfp108	99	73.442	ENSPEMG00000018022	-	100	72.404	Peromyscus_maniculatus_bairdii
ENSMUSG00000030486	Zfp108	100	46.256	ENSPPYG00000010085	ZNF233	96	46.256	Pongo_abelii
ENSMUSG00000030486	Zfp108	99	53.584	ENSPCOG00000015292	ZNF233	97	45.481	Propithecus_coquereli
ENSMUSG00000030486	Zfp108	81	66.667	ENSPVAG00000004388	ZNF233	70	66.667	Pteropus_vampyrus
ENSMUSG00000030486	Zfp108	100	51.156	ENSRBIG00000035218	ZNF233	99	51.156	Rhinopithecus_bieti
ENSMUSG00000030486	Zfp108	100	48.913	ENSRROG00000030619	ZNF233	99	53.137	Rhinopithecus_roxellana
ENSMUSG00000030486	Zfp108	99	46.629	ENSTTRG00000011818	ZNF233	99	55.738	Tursiops_truncatus
ENSMUSG00000030486	Zfp108	93	54.455	ENSUMAG00000023065	ZNF233	96	54.455	Ursus_maritimus
ENSMUSG00000030486	Zfp108	99	62.857	ENSVPAG00000007465	ZNF233	100	62.857	Vicugna_pacos
ENSMUSG00000030486	Zfp108	67	50.820	ENSXMAG00000027300	-	73	48.780	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003700	DNA-binding transcription factor activity	21873635.	IBA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0008150	biological_process	-	ND	Process