EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000030491 (Gene tree)
Gene ID: 71981
Gene Symbol: Tdrd12
Alias: 2410004F06Rik|2410070K17Rik|EG434165|G1-476-14|ecat8|repro23
Full Name: tudor domain containing 12
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 68648 bases
Position: chr7:35469098-35537745
Accession: 1919231
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000140328	TUDOR	PF00567.24	1e-34	1	2
ENSMUSP00000140328	TUDOR	PF00567.24	1e-34	2	2
ENSMUSP00000141796	TUDOR	PF00567.24	1.2e-34	1	2
ENSMUSP00000141796	TUDOR	PF00567.24	1.2e-34	2	2
ENSMUSP00000032701	TUDOR	PF00567.24	1.3e-24	1	1
ENSMUSP00000118671	TUDOR	PF00567.24	2.5e-12	1	1
ENSMUSP00000145609	TUDOR	PF00567.24	3.4e-12	1	1
ENSMUSP00000140328	DEAD	PF00270.29	4.4e-07	1	1
ENSMUSP00000141796	DEAD	PF00270.29	5.5e-07	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000187190	-	3341	XM_011250699	ENSMUSP00000140328	1113 (aa)	XP_011249001	A0A087WQS9
ENSMUST00000193633	-	3651	XM_011250698	ENSMUSP00000141796	1216 (aa)	XP_011249000	A0A0A6YX17
ENSMUST00000127472	-	769	-	ENSMUSP00000118671	204 (aa)	-	D3YZI6
ENSMUST00000205407	-	1412	-	ENSMUSP00000145609	354 (aa)	-	A0A0U1RNL0
ENSMUST00000032701	-	1620	-	ENSMUSP00000032701	407 (aa)	-	Q9CWU0
ENSMUST00000206641	-	543	-	ENSMUSP00000145652	127 (aa)	-	A0A0U1RNP6

Gene Model

Click here to download ENSMUSG00000030491's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000030491's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000030491	Tdrd12	100	76.093	ENSG00000173809	TDRD12	99	76.093	Homo_sapiens
ENSMUSG00000030491	Tdrd12	97	82.741	ENSAMEG00000009847	TDRD12	99	83.399	Ailuropoda_melanoleuca
ENSMUSG00000030491	Tdrd12	76	45.806	ENSACLG00000003249	-	70	45.833	Astatotilapia_calliptera
ENSMUSG00000030491	Tdrd12	97	82.741	ENSFCAG00000014913	TDRD12	100	71.899	Felis_catus
ENSMUSG00000030491	Tdrd12	76	44.516	ENSMZEG00005022688	-	86	44.907	Maylandia_zebra
ENSMUSG00000030491	Tdrd12	66	65.926	ENSMGAG00000017074	TDRD12	100	62.564	Meleagris_gallopavo
ENSMUSG00000030491	Tdrd12	97	83.249	ENSPTIG00000011285	TDRD12	100	71.576	Panthera_tigris_altaica
ENSMUSG00000030491	Tdrd12	51	54.808	ENSTGUG00000009119	-	99	55.769	Taeniopygia_guttata
ENSMUSG00000030491	Tdrd12	96	43.655	ENSXETG00000025568	TDRD12	95	40.426	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0004386	helicase activity	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0007140	male meiotic nuclear division	24067652.	IMP	Process
GO:0007275	multicellular organism development	-	IEA	Process
GO:0007283	spermatogenesis	24067652.	IMP	Process
GO:0009566	fertilization	24067652.	IMP	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0030154	cell differentiation	-	IEA	Process
GO:0031047	gene silencing by RNA	24067652.	IMP	Process
GO:0034587	piRNA metabolic process	24067652.	IMP	Process
GO:0043046	DNA methylation involved in gamete generation	24067652.	IMP	Process
GO:0051321	meiotic cell cycle	-	IEA	Process
GO:1990923	PET complex	26669262.	IDA	Component