EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000030611 (Gene tree)
Gene ID: 67994
Gene Symbol: Mrps11
Alias: -
Full Name: mitochondrial ribosomal protein S11
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 9871 bases
Position: chr7:78783119-78792989
Accession: 1915244
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000032840	Ribosomal_S11	PF00411.19	2.7e-26	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000136001	-	548	-	-	- (aa)	-	-
ENSMUST00000032840	-	1056	XM_006541135	ENSMUSP00000032840	191 (aa)	-	Q3U8Y1
ENSMUST00000133553	-	825	-	ENSMUSP00000146020	58 (aa)	-	A0A0U1RPK7
ENSMUST00000132922	-	792	-	-	- (aa)	-	-
ENSMUST00000133304	-	922	-	-	- (aa)	-	-
ENSMUST00000123706	-	924	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000030611's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000030611's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000030611	Mrps11	100	71.649	ENSG00000181991	MRPS11	100	71.649	Homo_sapiens
ENSMUSG00000030611	Mrps11	85	64.815	ENSAPOG00000018727	mrps11	81	64.815	Acanthochromis_polyacanthus
ENSMUSG00000030611	Mrps11	100	76.142	ENSAMEG00000012776	MRPS11	100	76.142	Ailuropoda_melanoleuca
ENSMUSG00000030611	Mrps11	79	67.742	ENSACIG00000007679	mrps11	97	67.742	Amphilophus_citrinellus
ENSMUSG00000030611	Mrps11	80	69.872	ENSAOCG00000000916	mrps11	65	69.872	Amphiprion_ocellaris
ENSMUSG00000030611	Mrps11	71	75.556	ENSAPEG00000006598	mrps11	76	71.622	Amphiprion_percula
ENSMUSG00000030611	Mrps11	84	65.217	ENSATEG00000005662	mrps11	81	65.217	Anabas_testudineus
ENSMUSG00000030611	Mrps11	87	62.275	ENSAPLG00000012913	MRPS11	90	62.722	Anas_platyrhynchos
ENSMUSG00000030611	Mrps11	92	66.102	ENSACAG00000005360	MRPS11	97	65.363	Anolis_carolinensis
ENSMUSG00000030611	Mrps11	100	73.711	ENSANAG00000035828	MRPS11	100	73.711	Aotus_nancymaae
ENSMUSG00000030611	Mrps11	78	68.831	ENSACLG00000019910	mrps11	81	68.831	Astatotilapia_calliptera
ENSMUSG00000030611	Mrps11	88	61.932	ENSAMXG00000021547	mrps11	84	61.932	Astyanax_mexicanus
ENSMUSG00000030611	Mrps11	100	75.127	ENSBTAG00000019831	MRPS11	100	75.127	Bos_taurus
ENSMUSG00000030611	Mrps11	63	44.628	WBGene00012244	mrps-11	68	40.845	Caenorhabditis_elegans
ENSMUSG00000030611	Mrps11	100	73.196	ENSCJAG00000013012	MRPS11	100	73.196	Callithrix_jacchus
ENSMUSG00000030611	Mrps11	100	75.000	ENSCAFG00000011502	MRPS11	100	75.000	Canis_familiaris
ENSMUSG00000030611	Mrps11	100	75.510	ENSCAFG00020018868	MRPS11	100	75.510	Canis_lupus_dingo
ENSMUSG00000030611	Mrps11	100	76.142	ENSCHIG00000022002	MRPS11	100	76.142	Capra_hircus
ENSMUSG00000030611	Mrps11	100	76.289	ENSTSYG00000011176	MRPS11	100	76.289	Carlito_syrichta
ENSMUSG00000030611	Mrps11	70	89.474	ENSCAPG00000012155	MRPS11	100	89.474	Cavia_aperea
ENSMUSG00000030611	Mrps11	100	76.562	ENSCPOG00000014489	MRPS11	100	76.562	Cavia_porcellus
ENSMUSG00000030611	Mrps11	100	71.282	ENSCCAG00000031468	-	100	71.282	Cebus_capucinus
ENSMUSG00000030611	Mrps11	99	65.285	ENSCCAG00000021347	-	95	65.285	Cebus_capucinus
ENSMUSG00000030611	Mrps11	100	75.773	ENSCATG00000016716	MRPS11	100	75.773	Cercocebus_atys
ENSMUSG00000030611	Mrps11	100	76.562	ENSCLAG00000017346	MRPS11	100	76.562	Chinchilla_lanigera
ENSMUSG00000030611	Mrps11	100	75.773	ENSCSAG00000017199	MRPS11	100	75.773	Chlorocebus_sabaeus
ENSMUSG00000030611	Mrps11	100	76.923	ENSCHOG00000009121	MRPS11	99	74.359	Choloepus_hoffmanni
ENSMUSG00000030611	Mrps11	95	65.426	ENSCPBG00000017906	MRPS11	75	65.426	Chrysemys_picta_bellii
ENSMUSG00000030611	Mrps11	100	75.258	ENSCANG00000037910	MRPS11	100	75.258	Colobus_angolensis_palliatus
ENSMUSG00000030611	Mrps11	100	85.340	ENSCGRG00001012765	Mrps11	100	85.340	Cricetulus_griseus_chok1gshd
ENSMUSG00000030611	Mrps11	100	85.340	ENSCGRG00000004167	Mrps11	100	85.340	Cricetulus_griseus_crigri
ENSMUSG00000030611	Mrps11	99	53.968	ENSCSEG00000010615	mrps11	97	53.968	Cynoglossus_semilaevis
ENSMUSG00000030611	Mrps11	70	76.119	ENSCVAG00000013577	mrps11	74	76.119	Cyprinodon_variegatus
ENSMUSG00000030611	Mrps11	99	57.292	ENSDARG00000075129	mrps11	96	57.292	Danio_rerio
ENSMUSG00000030611	Mrps11	85	78.182	ENSDNOG00000005258	MRPS11	85	78.182	Dasypus_novemcinctus
ENSMUSG00000030611	Mrps11	70	87.218	ENSDORG00000024352	Mrps11	100	87.218	Dipodomys_ordii
ENSMUSG00000030611	Mrps11	63	49.167	FBgn0038474	mRpS11	76	41.447	Drosophila_melanogaster
ENSMUSG00000030611	Mrps11	82	52.469	ENSEBUG00000010376	mrps11	78	57.778	Eptatretus_burgeri
ENSMUSG00000030611	Mrps11	100	77.436	ENSEASG00005015369	MRPS11	100	77.436	Equus_asinus_asinus
ENSMUSG00000030611	Mrps11	100	77.436	ENSECAG00000007319	MRPS11	100	77.436	Equus_caballus
ENSMUSG00000030611	Mrps11	86	64.242	ENSELUG00000016452	mrps11	86	71.642	Esox_lucius
ENSMUSG00000030611	Mrps11	100	77.157	ENSFCAG00000014967	MRPS11	100	77.157	Felis_catus
ENSMUSG00000030611	Mrps11	86	61.818	ENSFALG00000010437	MRPS11	98	63.030	Ficedula_albicollis
ENSMUSG00000030611	Mrps11	100	74.479	ENSFDAG00000018915	MRPS11	100	74.479	Fukomys_damarensis
ENSMUSG00000030611	Mrps11	87	63.473	ENSFHEG00000001310	mrps11	82	63.473	Fundulus_heteroclitus
ENSMUSG00000030611	Mrps11	70	73.881	ENSGMOG00000018625	mrps11	100	73.881	Gadus_morhua
ENSMUSG00000030611	Mrps11	87	64.072	ENSGALG00000006777	MRPS11	91	64.072	Gallus_gallus
ENSMUSG00000030611	Mrps11	78	70.000	ENSGAFG00000001720	mrps11	77	70.000	Gambusia_affinis
ENSMUSG00000030611	Mrps11	70	75.940	ENSGACG00000014791	mrps11	99	75.940	Gasterosteus_aculeatus
ENSMUSG00000030611	Mrps11	85	72.189	ENSGAGG00000013556	MRPS11	87	72.189	Gopherus_agassizii
ENSMUSG00000030611	Mrps11	100	72.165	ENSGGOG00000015152	MRPS11	100	72.165	Gorilla_gorilla
ENSMUSG00000030611	Mrps11	78	68.182	ENSHBUG00000019804	mrps11	85	68.182	Haplochromis_burtoni
ENSMUSG00000030611	Mrps11	100	77.083	ENSHGLG00000007732	MRPS11	100	77.083	Heterocephalus_glaber_female
ENSMUSG00000030611	Mrps11	100	77.083	ENSHGLG00100010255	MRPS11	100	77.083	Heterocephalus_glaber_male
ENSMUSG00000030611	Mrps11	69	69.925	ENSHCOG00000001347	mrps11	83	69.173	Hippocampus_comes
ENSMUSG00000030611	Mrps11	85	64.072	ENSIPUG00000022494	MRPS11	83	63.473	Ictalurus_punctatus
ENSMUSG00000030611	Mrps11	84	80.625	ENSSTOG00000021237	MRPS11	98	80.625	Ictidomys_tridecemlineatus
ENSMUSG00000030611	Mrps11	100	76.650	ENSJJAG00000000570	Mrps11	100	76.142	Jaculus_jaculus
ENSMUSG00000030611	Mrps11	99	59.184	ENSKMAG00000000890	mrps11	97	59.184	Kryptolebias_marmoratus
ENSMUSG00000030611	Mrps11	91	62.069	ENSLBEG00000023307	mrps11	89	62.069	Labrus_bergylta
ENSMUSG00000030611	Mrps11	96	59.677	ENSLACG00000007480	MRPS11	93	59.677	Latimeria_chalumnae
ENSMUSG00000030611	Mrps11	88	62.791	ENSLOCG00000014531	mrps11	82	62.791	Lepisosteus_oculatus
ENSMUSG00000030611	Mrps11	100	71.875	ENSLAFG00000030086	MRPS11	100	73.575	Loxodonta_africana
ENSMUSG00000030611	Mrps11	100	76.289	ENSMFAG00000001006	MRPS11	100	76.289	Macaca_fascicularis
ENSMUSG00000030611	Mrps11	100	76.289	ENSMMUG00000013659	MRPS11	100	76.289	Macaca_mulatta
ENSMUSG00000030611	Mrps11	100	76.289	ENSMNEG00000039978	MRPS11	100	76.289	Macaca_nemestrina
ENSMUSG00000030611	Mrps11	100	75.258	ENSMLEG00000037050	MRPS11	100	75.258	Mandrillus_leucophaeus
ENSMUSG00000030611	Mrps11	86	64.024	ENSMAMG00000006581	mrps11	84	64.024	Mastacembelus_armatus
ENSMUSG00000030611	Mrps11	78	68.831	ENSMZEG00005005157	mrps11	76	68.831	Maylandia_zebra
ENSMUSG00000030611	Mrps11	85	64.198	ENSMGAG00000008763	MRPS11	97	64.198	Meleagris_gallopavo
ENSMUSG00000030611	Mrps11	100	85.864	ENSMAUG00000006622	Mrps11	100	85.864	Mesocricetus_auratus
ENSMUSG00000030611	Mrps11	100	77.320	ENSMICG00000015830	MRPS11	100	76.804	Microcebus_murinus
ENSMUSG00000030611	Mrps11	100	85.340	ENSMOCG00000020525	Mrps11	100	85.340	Microtus_ochrogaster
ENSMUSG00000030611	Mrps11	69	70.455	ENSMMOG00000015779	mrps11	86	70.455	Mola_mola
ENSMUSG00000030611	Mrps11	72	80.292	ENSMODG00000019589	MRPS11	84	70.482	Monodelphis_domestica
ENSMUSG00000030611	Mrps11	79	69.032	ENSMALG00000012248	mrps11	75	71.141	Monopterus_albus
ENSMUSG00000030611	Mrps11	100	98.953	MGP_CAROLIEiJ_G0029870	Mrps11	100	98.953	Mus_caroli
ENSMUSG00000030611	Mrps11	100	96.335	MGP_PahariEiJ_G0013092	Mrps11	100	96.335	Mus_pahari
ENSMUSG00000030611	Mrps11	100	98.429	MGP_SPRETEiJ_G0030972	Mrps11	100	98.429	Mus_spretus
ENSMUSG00000030611	Mrps11	100	76.020	ENSMPUG00000015823	MRPS11	100	76.020	Mustela_putorius_furo
ENSMUSG00000030611	Mrps11	100	47.761	ENSMLUG00000009637	MRPS11	100	50.249	Myotis_lucifugus
ENSMUSG00000030611	Mrps11	100	81.675	ENSNGAG00000010433	Mrps11	100	81.675	Nannospalax_galili
ENSMUSG00000030611	Mrps11	78	68.831	ENSNBRG00000006581	mrps11	79	68.831	Neolamprologus_brichardi
ENSMUSG00000030611	Mrps11	100	73.711	ENSNLEG00000034839	MRPS11	100	73.711	Nomascus_leucogenys
ENSMUSG00000030611	Mrps11	70	86.466	ENSOPRG00000008247	MRPS11	82	86.466	Ochotona_princeps
ENSMUSG00000030611	Mrps11	100	72.396	ENSODEG00000014618	MRPS11	100	72.396	Octodon_degus
ENSMUSG00000030611	Mrps11	79	68.387	ENSONIG00000003016	mrps11	73	68.387	Oreochromis_niloticus
ENSMUSG00000030611	Mrps11	70	84.211	ENSOANG00000015559	MRPS11	85	84.211	Ornithorhynchus_anatinus
ENSMUSG00000030611	Mrps11	100	72.396	ENSOCUG00000025921	MRPS11	100	73.822	Oryctolagus_cuniculus
ENSMUSG00000030611	Mrps11	85	67.284	ENSORLG00000014573	mrps11	81	67.284	Oryzias_latipes
ENSMUSG00000030611	Mrps11	85	66.667	ENSORLG00020019097	mrps11	81	66.667	Oryzias_latipes_hni
ENSMUSG00000030611	Mrps11	85	66.049	ENSORLG00015017121	mrps11	81	66.049	Oryzias_latipes_hsok
ENSMUSG00000030611	Mrps11	85	67.901	ENSOMEG00000017915	mrps11	81	67.901	Oryzias_melastigma
ENSMUSG00000030611	Mrps11	86	78.443	ENSOGAG00000004739	MRPS11	97	78.443	Otolemur_garnettii
ENSMUSG00000030611	Mrps11	100	75.758	ENSOARG00000010899	MRPS11	100	75.758	Ovis_aries
ENSMUSG00000030611	Mrps11	100	72.165	ENSPPAG00000028073	MRPS11	100	72.165	Pan_paniscus
ENSMUSG00000030611	Mrps11	100	77.157	ENSPPRG00000001535	MRPS11	100	77.157	Panthera_pardus
ENSMUSG00000030611	Mrps11	100	76.650	ENSPTIG00000020641	MRPS11	100	76.650	Panthera_tigris_altaica
ENSMUSG00000030611	Mrps11	100	72.165	ENSPTRG00000007420	MRPS11	100	72.165	Pan_troglodytes
ENSMUSG00000030611	Mrps11	100	75.773	ENSPANG00000011753	MRPS11	100	75.773	Papio_anubis
ENSMUSG00000030611	Mrps11	61	62.602	ENSPKIG00000014626	-	64	58.065	Paramormyrops_kingsleyae
ENSMUSG00000030611	Mrps11	87	68.023	ENSPSIG00000014576	MRPS11	84	68.023	Pelodiscus_sinensis
ENSMUSG00000030611	Mrps11	84	65.217	ENSPMGG00000023147	mrps11	82	65.217	Periophthalmus_magnuspinnatus
ENSMUSG00000030611	Mrps11	100	86.911	ENSPEMG00000012996	Mrps11	100	86.911	Peromyscus_maniculatus_bairdii
ENSMUSG00000030611	Mrps11	100	57.592	ENSPMAG00000008136	mrps11	100	57.592	Petromyzon_marinus
ENSMUSG00000030611	Mrps11	78	70.667	ENSPFOG00000017576	mrps11	77	70.667	Poecilia_formosa
ENSMUSG00000030611	Mrps11	78	70.667	ENSPLAG00000016343	mrps11	77	70.667	Poecilia_latipinna
ENSMUSG00000030611	Mrps11	79	70.000	ENSPMEG00000003695	mrps11	77	70.000	Poecilia_mexicana
ENSMUSG00000030611	Mrps11	79	68.000	ENSPREG00000004767	mrps11	77	68.000	Poecilia_reticulata
ENSMUSG00000030611	Mrps11	100	72.165	ENSPPYG00000006751	MRPS11	100	72.165	Pongo_abelii
ENSMUSG00000030611	Mrps11	100	52.821	ENSPCAG00000003032	MRPS11	100	52.821	Procavia_capensis
ENSMUSG00000030611	Mrps11	100	74.227	ENSPCOG00000019243	MRPS11	100	74.227	Propithecus_coquereli
ENSMUSG00000030611	Mrps11	100	76.884	ENSPVAG00000001594	MRPS11	100	76.884	Pteropus_vampyrus
ENSMUSG00000030611	Mrps11	78	68.182	ENSPNYG00000008428	mrps11	79	68.182	Pundamilia_nyererei
ENSMUSG00000030611	Mrps11	71	74.815	ENSPNAG00000002759	mrps11	71	74.815	Pygocentrus_nattereri
ENSMUSG00000030611	Mrps11	100	94.241	ENSRNOG00000018531	Mrps11	100	94.241	Rattus_norvegicus
ENSMUSG00000030611	Mrps11	100	89.583	ENSRNOG00000003080	AABR07021945.1	100	89.583	Rattus_norvegicus
ENSMUSG00000030611	Mrps11	100	77.320	ENSRBIG00000035902	MRPS11	100	77.320	Rhinopithecus_bieti
ENSMUSG00000030611	Mrps11	100	77.320	ENSRROG00000032838	MRPS11	100	77.320	Rhinopithecus_roxellana
ENSMUSG00000030611	Mrps11	100	74.227	ENSSBOG00000032874	MRPS11	100	74.227	Saimiri_boliviensis_boliviensis
ENSMUSG00000030611	Mrps11	55	78.095	ENSSHAG00000000058	-	83	78.095	Sarcophilus_harrisii
ENSMUSG00000030611	Mrps11	82	68.153	ENSSFOG00015023615	mrps11	76	68.153	Scleropages_formosus
ENSMUSG00000030611	Mrps11	97	57.527	ENSSMAG00000010954	mrps11	94	57.527	Scophthalmus_maximus
ENSMUSG00000030611	Mrps11	97	61.497	ENSSDUG00000008450	mrps11	95	61.497	Seriola_dumerili
ENSMUSG00000030611	Mrps11	84	66.460	ENSSLDG00000015652	mrps11	81	66.460	Seriola_lalandi_dorsalis
ENSMUSG00000030611	Mrps11	87	64.881	ENSSPUG00000012009	MRPS11	93	64.881	Sphenodon_punctatus
ENSMUSG00000030611	Mrps11	82	65.625	ENSSPAG00000017107	mrps11	83	65.625	Stegastes_partitus
ENSMUSG00000030611	Mrps11	100	74.490	ENSSSCG00000037343	MRPS11	100	74.490	Sus_scrofa
ENSMUSG00000030611	Mrps11	66	74.603	ENSTGUG00000008345	MRPS11	97	74.603	Taeniopygia_guttata
ENSMUSG00000030611	Mrps11	85	66.667	ENSTRUG00000020346	mrps11	82	66.667	Takifugu_rubripes
ENSMUSG00000030611	Mrps11	85	68.712	ENSTNIG00000011909	mrps11	75	68.712	Tetraodon_nigroviridis
ENSMUSG00000030611	Mrps11	89	72.989	ENSTTRG00000008703	MRPS11	100	72.989	Tursiops_truncatus
ENSMUSG00000030611	Mrps11	100	76.020	ENSUAMG00000019059	MRPS11	100	76.020	Ursus_americanus
ENSMUSG00000030611	Mrps11	100	76.684	ENSUMAG00000006261	MRPS11	100	76.684	Ursus_maritimus
ENSMUSG00000030611	Mrps11	81	55.280	ENSVPAG00000004713	-	99	55.280	Vicugna_pacos
ENSMUSG00000030611	Mrps11	100	76.020	ENSVVUG00000012046	-	100	76.020	Vulpes_vulpes
ENSMUSG00000030611	Mrps11	87	65.294	ENSXETG00000007593	mrps11	87	65.294	Xenopus_tropicalis
ENSMUSG00000030611	Mrps11	79	71.333	ENSXCOG00000018085	mrps11	93	71.333	Xiphophorus_couchianus
ENSMUSG00000030611	Mrps11	77	72.483	ENSXMAG00000011607	mrps11	77	72.483	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000028	ribosomal small subunit assembly	21873635.	IBA	Process
GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	11402041.	ISS	Function
GO:0005739	mitochondrion	14651853.18614015.	HDA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005763	mitochondrial small ribosomal subunit	21873635.	IBA	Component
GO:0005763	mitochondrial small ribosomal subunit	21531335.	ISO	Component
GO:0005763	mitochondrial small ribosomal subunit	11402041.	ISS	Component
GO:0005840	ribosome	-	IEA	Component
GO:0006412	translation	21873635.	IBA	Process
GO:0032543	mitochondrial translation	11402041.	ISS	Process
GO:0048027	mRNA 5'-UTR binding	21873635.	IBA	Function
GO:0070181	small ribosomal subunit rRNA binding	21873635.	IBA	Function