EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000030663 (Gene tree)
Gene ID: 56372
Gene Symbol: 1110004F10Rik
Alias: sid2057
Full Name: RIKEN cDNA 1110004F10 gene
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 65814
Position: chr7: 116039397-116105210
Accession: 1929274
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000032899	-	1479	XM_011241867	ENSMUSP00000032899	181 (aa)	XP_011240169	Q9R0P4
ENSMUST00000106608	-	927	-	ENSMUSP00000102219	137 (aa)	-	D3YVR9
ENSMUST00000205427	-	703	-	ENSMUSP00000145989	21 (aa)	-	A0A0U1RPI0
ENSMUST00000151254	-	1430	-	ENSMUSP00000116035	81 (aa)	-	D6RI64
ENSMUST00000205450	-	931	-	ENSMUSP00000146007	60 (aa)	-	A0A0U1RPJ7
ENSMUST00000106607	-	1153	-	ENSMUSP00000102218	94 (aa)	-	D3YVS0

Gene Model

Click here to download ENSMUSG00000030663's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000030663's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000030663	1110004F10Rik	100	100.000	ENSG00000110696	C11orf58	100	95.082	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0005575	cellular_component	-	ND	Component
GO:0008150	biological_process	-	ND	Process