EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000030706 (Gene tree)
Gene ID
52443
Gene Symbol
Mrpl48
Alias
1810030E20Rik|CGI-118|D4Ertd786e
Full Name
mitochondrial ribosomal protein L48
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Minus strand
Length
62551 bases
Position
chr7:100545751-100608301
Accession
1289321
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000116090Ribosomal_S10PF00338.224.2e-1611
ENSMUSP00000146539Ribosomal_S10PF00338.226.1e-1311
ENSMUSP00000146371Ribosomal_S10PF00338.223.6e-0811
ENSMUSP00000146661Ribosomal_S10PF00338.221.7e-0511
ENSMUSP00000146663Ribosomal_S10PF00338.220.0004611
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27768875High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem CellsnIC & mESC2016.09He CDOI: 10.1016/j.molcel.2016.09.034
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000152876-508-ENSMUSP00000117055113 (aa)-D3Z6C8
ENSMUST00000208916-2144--- (aa)--
ENSMUST00000150042-4285-ENSMUSP00000116090211 (aa)-E9QPQ8
ENSMUST00000146003-1625XM_006508021ENSMUSP00000146539113 (aa)XP_006508084A0A140LHT6
ENSMUST00000127253-706--- (aa)--
ENSMUST00000132888-639-ENSMUSP0000014666159 (aa)-A0A140LI38
ENSMUST00000064334-1865-ENSMUSP00000067290102 (aa)-Q8C3P2
ENSMUST00000107053-834-ENSMUSP0000014665442 (aa)-A0A140LI32
ENSMUST00000137777-713-ENSMUSP0000014637174 (aa)-A0A140LHD4
ENSMUST00000138448-865-ENSMUSP0000014666351 (aa)-A0A140LI40
Gene Model
Click here to download ENSMUSG00000030706's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000030706's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000030706Mrpl4810086.726ENSG00000175581MRPL4810089.091Homo_sapiens
ENSMUSG00000030706Mrpl4810062.712ENSAPOG00000013955mrpl489550.246Acanthochromis_polyacanthus
ENSMUSG00000030706Mrpl4810087.611ENSAMEG00000017282MRPL489883.092Ailuropoda_melanoleuca
ENSMUSG00000030706Mrpl4810061.017ENSACIG00000009743mrpl488554.217Amphilophus_citrinellus
ENSMUSG00000030706Mrpl4810061.017ENSAOCG00000004158mrpl489250.510Amphiprion_ocellaris
ENSMUSG00000030706Mrpl4810061.017ENSAPEG00000024029mrpl489250.000Amphiprion_percula
ENSMUSG00000030706Mrpl4810061.017ENSATEG00000012425mrpl488751.934Anabas_testudineus
ENSMUSG00000030706Mrpl4810066.372ENSAPLG00000008046MRPL4810056.250Anas_platyrhynchos
ENSMUSG00000030706Mrpl4810072.881ENSACAG00000006382MRPL489054.545Anolis_carolinensis
ENSMUSG00000030706Mrpl4810084.071ENSANAG00000036546MRPL4810078.774Aotus_nancymaae
ENSMUSG00000030706Mrpl4810056.637ENSACLG00000024077mrpl488449.724Astatotilapia_calliptera
ENSMUSG00000030706Mrpl4810071.186ENSAMXG00000006784mrpl4810053.927Astyanax_mexicanus
ENSMUSG00000030706Mrpl4810088.496ENSBTAG00000008347MRPL4810081.604Bos_taurus
ENSMUSG00000030706Mrpl4810084.956ENSCJAG00000015867MRPL4810078.774Callithrix_jacchus
ENSMUSG00000030706Mrpl489885.586ENSCAFG00000008462-10079.048Canis_familiaris
ENSMUSG00000030706Mrpl4810091.150ENSCAFG00000005585-9988.571Canis_familiaris
ENSMUSG00000030706Mrpl4810086.441ENSCAFG00020002202-5972.034Canis_lupus_dingo
ENSMUSG00000030706Mrpl4810088.496ENSCHIG00000013981MRPL4810081.132Capra_hircus
ENSMUSG00000030706Mrpl4810090.265ENSTSYG00000012895MRPL4810080.660Carlito_syrichta
ENSMUSG00000030706Mrpl4810084.746ENSCAPG00000013554-10084.746Cavia_aperea
ENSMUSG00000030706Mrpl4810090.265ENSCPOG00000013291MRPL4810078.302Cavia_porcellus
ENSMUSG00000030706Mrpl4810084.956ENSCCAG00000024861-10078.302Cebus_capucinus
ENSMUSG00000030706Mrpl4810075.221ENSCCAG00000037377-9772.512Cebus_capucinus
ENSMUSG00000030706Mrpl4810076.471ENSCATG00000026811-10066.981Cercocebus_atys
ENSMUSG00000030706Mrpl4810088.496ENSCATG00000008832MRPL4810080.660Cercocebus_atys
ENSMUSG00000030706Mrpl4810089.381ENSCLAG00000014653MRPL4810081.132Chinchilla_lanigera
ENSMUSG00000030706Mrpl4810088.496ENSCSAG00000004059MRPL4810080.189Chlorocebus_sabaeus
ENSMUSG00000030706Mrpl4810084.746ENSCHOG00000003662MRPL4810067.368Choloepus_hoffmanni
ENSMUSG00000030706Mrpl489259.434ENSCPBG00000000043MRPL489259.434Chrysemys_picta_bellii
ENSMUSG00000030706Mrpl4810038.095ENSCING00000013289-8533.523Ciona_intestinalis
ENSMUSG00000030706Mrpl489833.613ENSCSAVG00000006671-8931.551Ciona_savignyi
ENSMUSG00000030706Mrpl4810089.381ENSCANG00000030769MRPL4810080.660Colobus_angolensis_palliatus
ENSMUSG00000030706Mrpl4810093.805ENSCGRG00001021190Mrpl4810089.151Cricetulus_griseus_chok1gshd
ENSMUSG00000030706Mrpl4810093.805ENSCGRG00000004097Mrpl4810089.151Cricetulus_griseus_crigri
ENSMUSG00000030706Mrpl4810061.062ENSCSEG00000017376mrpl489646.569Cynoglossus_semilaevis
ENSMUSG00000030706Mrpl4810059.322ENSCVAG00000014692mrpl488453.977Cyprinodon_variegatus
ENSMUSG00000030706Mrpl4810062.712ENSDARG00000035167mrpl488055.952Danio_rerio
ENSMUSG00000030706Mrpl4810088.496ENSDNOG00000002177MRPL489982.286Dasypus_novemcinctus
ENSMUSG00000030706Mrpl4810088.496ENSDORG00000000644-10088.496Dipodomys_ordii
ENSMUSG00000030706Mrpl489636.364FBgn0031357mRpL486935.433Drosophila_melanogaster
ENSMUSG00000030706Mrpl4810081.416ENSETEG00000009413MRPL488367.925Echinops_telfairi
ENSMUSG00000030706Mrpl4810042.478ENSEBUG00000003240mrpl488740.351Eptatretus_burgeri
ENSMUSG00000030706Mrpl4810088.496ENSEASG00005017939MRPL489086.286Equus_asinus_asinus
ENSMUSG00000030706Mrpl4810088.496ENSECAG00000022115MRPL4810081.132Equus_caballus
ENSMUSG00000030706Mrpl4810066.102ENSELUG00000008942mrpl487958.683Esox_lucius
ENSMUSG00000030706Mrpl4810089.381ENSFCAG00000025668MRPL4810089.381Felis_catus
ENSMUSG00000030706Mrpl489771.930ENSFALG00000008015MRPL4810054.369Ficedula_albicollis
ENSMUSG00000030706Mrpl4810090.265ENSFDAG00000010990MRPL4810081.604Fukomys_damarensis
ENSMUSG00000030706Mrpl4810061.017ENSFHEG00000020130mrpl489449.246Fundulus_heteroclitus
ENSMUSG00000030706Mrpl4810057.627ENSGMOG00000018272mrpl489751.807Gadus_morhua
ENSMUSG00000030706Mrpl4810065.487ENSGALG00000017319MRPL489855.610Gallus_gallus
ENSMUSG00000030706Mrpl4810059.322ENSGAFG00000004136mrpl489946.190Gambusia_affinis
ENSMUSG00000030706Mrpl4810062.712ENSGACG00000018902mrpl488156.287Gasterosteus_aculeatus
ENSMUSG00000030706Mrpl4810070.270ENSGAGG00000005045MRPL4810057.547Gopherus_agassizii
ENSMUSG00000030706Mrpl4810086.726ENSGGOG00000022915MRPL4810086.726Gorilla_gorilla
ENSMUSG00000030706Mrpl4810075.676ENSGGOG00000013682-9971.357Gorilla_gorilla
ENSMUSG00000030706Mrpl4810054.867ENSHBUG00000002169mrpl488448.619Haplochromis_burtoni
ENSMUSG00000030706Mrpl4810092.035ENSHGLG00000006113MRPL4810092.035Heterocephalus_glaber_female
ENSMUSG00000030706Mrpl4810092.035ENSHGLG00100014660MRPL4810083.019Heterocephalus_glaber_male
ENSMUSG00000030706Mrpl4810057.627ENSHCOG00000013282mrpl489451.053Hippocampus_comes
ENSMUSG00000030706Mrpl4810067.797ENSIPUG00000021795Mrpl4810051.659Ictalurus_punctatus
ENSMUSG00000030706Mrpl4810085.841ENSSTOG00000010694MRPL4810079.245Ictidomys_tridecemlineatus
ENSMUSG00000030706Mrpl4810062.712ENSKMAG00000010818mrpl489945.714Kryptolebias_marmoratus
ENSMUSG00000030706Mrpl4810062.712ENSLBEG00000002181mrpl489450.259Labrus_bergylta
ENSMUSG00000030706Mrpl489854.955ENSLACG00000004317MRPL4810040.566Latimeria_chalumnae
ENSMUSG00000030706Mrpl4810068.142ENSLOCG00000006190mrpl489256.923Lepisosteus_oculatus
ENSMUSG00000030706Mrpl4810085.135ENSLAFG00000003800MRPL4810080.226Loxodonta_africana
ENSMUSG00000030706Mrpl4810088.496ENSMFAG00000003172MRPL4810080.488Macaca_fascicularis
ENSMUSG00000030706Mrpl4810076.106ENSMMUG00000008225-10065.566Macaca_mulatta
ENSMUSG00000030706Mrpl4810088.496ENSMMUG00000014680MRPL489981.910Macaca_mulatta
ENSMUSG00000030706Mrpl4810076.991ENSMNEG00000033728-9968.900Macaca_nemestrina
ENSMUSG00000030706Mrpl4810088.496ENSMNEG00000043715MRPL4810088.496Macaca_nemestrina
ENSMUSG00000030706Mrpl4810088.496ENSMLEG00000025711MRPL4810080.660Mandrillus_leucophaeus
ENSMUSG00000030706Mrpl4810078.761ENSMLEG00000043784-10069.340Mandrillus_leucophaeus
ENSMUSG00000030706Mrpl4810059.322ENSMAMG00000011802mrpl489249.490Mastacembelus_armatus
ENSMUSG00000030706Mrpl4810056.637ENSMZEG00005021086mrpl488353.293Maylandia_zebra
ENSMUSG00000030706Mrpl4810068.919ENSMGAG00000015300MRPL489957.282Meleagris_gallopavo
ENSMUSG00000030706Mrpl4810092.035ENSMAUG00000000711Mrpl4810087.264Mesocricetus_auratus
ENSMUSG00000030706Mrpl4810092.920ENSMICG00000028005-8881.517Microcebus_murinus
ENSMUSG00000030706Mrpl4810093.805ENSMICG00000012645-10083.962Microcebus_murinus
ENSMUSG00000030706Mrpl4810096.610ENSMOCG00000013808Mrpl4810095.575Microtus_ochrogaster
ENSMUSG00000030706Mrpl4810056.637ENSMMOG00000020651mrpl489956.637Mola_mola
ENSMUSG00000030706Mrpl4810075.221ENSMODG00000007576MRPL4810067.925Monodelphis_domestica
ENSMUSG00000030706Mrpl4810059.292ENSMALG00000008851mrpl489049.490Monopterus_albus
ENSMUSG00000030706Mrpl487696.512MGP_CAROLIEiJ_G0030050-10096.512Mus_caroli
ENSMUSG00000030706Mrpl4810097.345MGP_PahariEiJ_G0013272Mrpl4810096.682Mus_pahari
ENSMUSG00000030706Mrpl4810098.578MGP_SPRETEiJ_G0031161Mrpl4810098.578Mus_spretus
ENSMUSG00000030706Mrpl4810083.186ENSMPUG00000019110-10076.887Mustela_putorius_furo
ENSMUSG00000030706Mrpl4810084.956ENSMLUG00000012083MRPL4810077.830Myotis_lucifugus
ENSMUSG00000030706Mrpl4810092.035ENSNGAG00000006402Mrpl4810086.321Nannospalax_galili
ENSMUSG00000030706Mrpl4810052.542ENSNBRG00000011494mrpl485949.123Neolamprologus_brichardi
ENSMUSG00000030706Mrpl487854.545ENSNBRG00000005766-9154.545Neolamprologus_brichardi
ENSMUSG00000030706Mrpl4810087.611ENSNLEG00000017097MRPL4810080.660Nomascus_leucogenys
ENSMUSG00000030706Mrpl4810072.566ENSNLEG00000028993-10068.396Nomascus_leucogenys
ENSMUSG00000030706Mrpl4810085.841ENSOPRG00000010373MRPL489883.607Ochotona_princeps
ENSMUSG00000030706Mrpl4810088.496ENSODEG00000005929MRPL4810088.496Octodon_degus
ENSMUSG00000030706Mrpl4810056.637ENSONIG00000012529mrpl488448.913Oreochromis_niloticus
ENSMUSG00000030706Mrpl4810080.531ENSOANG00000013906-10064.789Ornithorhynchus_anatinus
ENSMUSG00000030706Mrpl4810087.611ENSOCUG00000009302-8982.022Oryctolagus_cuniculus
ENSMUSG00000030706Mrpl4810087.611ENSOCUG00000025915-10081.132Oryctolagus_cuniculus
ENSMUSG00000030706Mrpl4810062.712ENSORLG00000008682mrpl488851.397Oryzias_latipes
ENSMUSG00000030706Mrpl4810062.712ENSORLG00020004801MRPL488851.397Oryzias_latipes_hni
ENSMUSG00000030706Mrpl4810062.712ENSORLG00015021506mrpl488851.955Oryzias_latipes_hsok
ENSMUSG00000030706Mrpl4810061.017ENSOMEG00000019182mrpl488253.614Oryzias_melastigma
ENSMUSG00000030706Mrpl4810091.525ENSOGAG00000027978-10083.491Otolemur_garnettii
ENSMUSG00000030706Mrpl4810092.035ENSOGAG00000004771-10091.034Otolemur_garnettii
ENSMUSG00000030706Mrpl4810088.496ENSOARG00000008118MRPL4810081.132Ovis_aries
ENSMUSG00000030706Mrpl489987.500ENSPPAG00000039192MRPL489980.569Pan_paniscus
ENSMUSG00000030706Mrpl4810090.265ENSPPRG00000008470MRPL4810090.265Panthera_pardus
ENSMUSG00000030706Mrpl4810090.265ENSPTIG00000020025MRPL4810090.265Panthera_tigris_altaica
ENSMUSG00000030706Mrpl489987.500ENSPTRG00000004049MRPL489980.569Pan_troglodytes
ENSMUSG00000030706Mrpl4810077.876ENSPANG00000030690-10067.453Papio_anubis
ENSMUSG00000030706Mrpl4810088.496ENSPANG00000019128MRPL4810080.660Papio_anubis
ENSMUSG00000030706Mrpl4810061.062ENSPKIG00000024210mrpl489961.062Paramormyrops_kingsleyae
ENSMUSG00000030706Mrpl4810067.797ENSPSIG00000014248MRPL489859.487Pelodiscus_sinensis
ENSMUSG00000030706Mrpl4810064.407ENSPMGG00000004557mrpl489045.255Periophthalmus_magnuspinnatus
ENSMUSG00000030706Mrpl4810095.575ENSPEMG00000021769Mrpl4810095.575Peromyscus_maniculatus_bairdii
ENSMUSG00000030706Mrpl4810077.876ENSPCIG00000021813MRPL488168.868Phascolarctos_cinereus
ENSMUSG00000030706Mrpl4810057.627ENSPFOG00000014883mrpl488848.947Poecilia_formosa
ENSMUSG00000030706Mrpl4810057.627ENSPLAG00000004162mrpl488950.000Poecilia_latipinna
ENSMUSG00000030706Mrpl4810057.627ENSPMEG00000015944mrpl489049.474Poecilia_mexicana
ENSMUSG00000030706Mrpl4810054.867ENSPREG00000020427mrpl488550.000Poecilia_reticulata
ENSMUSG00000030706Mrpl489987.500ENSPPYG00000003664-8179.621Pongo_abelii
ENSMUSG00000030706Mrpl4810092.035ENSPCOG00000020385-9981.429Propithecus_coquereli
ENSMUSG00000030706Mrpl4810093.805ENSPCOG00000025047-10084.906Propithecus_coquereli
ENSMUSG00000030706Mrpl4810086.441ENSPVAG00000006653MRPL489968.947Pteropus_vampyrus
ENSMUSG00000030706Mrpl4810055.752ENSPNYG00000020778mrpl488449.171Pundamilia_nyererei
ENSMUSG00000030706Mrpl4810066.102ENSPNAG00000027512mrpl487258.382Pygocentrus_nattereri
ENSMUSG00000030706Mrpl4810094.690ENSRNOG00000018042Mrpl4810093.365Rattus_norvegicus
ENSMUSG00000030706Mrpl4810078.761ENSRBIG00000030623-10068.396Rhinopithecus_bieti
ENSMUSG00000030706Mrpl4810089.381ENSRROG00000043160MRPL489780.976Rhinopithecus_roxellana
ENSMUSG00000030706Mrpl4810078.761ENSRROG00000040924-10068.396Rhinopithecus_roxellana
ENSMUSG00000030706Mrpl489275.962ENSSBOG00000028791-10075.962Saimiri_boliviensis_boliviensis
ENSMUSG00000030706Mrpl4810077.876ENSSHAG00000014091MRPL4810072.000Sarcophilus_harrisii
ENSMUSG00000030706Mrpl4810051.327ENSSFOG00015002052mrpl489244.175Scleropages_formosus
ENSMUSG00000030706Mrpl4810058.407ENSSMAG00000015781mrpl489747.573Scophthalmus_maximus
ENSMUSG00000030706Mrpl4810057.627ENSSDUG00000014937mrpl489044.041Seriola_dumerili
ENSMUSG00000030706Mrpl4810057.627ENSSLDG00000008081mrpl489044.560Seriola_lalandi_dorsalis
ENSMUSG00000030706Mrpl4810086.726ENSSARG00000003792MRPL486882.184Sorex_araneus
ENSMUSG00000030706Mrpl4810066.372ENSSPUG00000017310MRPL4810056.338Sphenodon_punctatus
ENSMUSG00000030706Mrpl4810057.627ENSSPAG00000012763mrpl489546.193Stegastes_partitus
ENSMUSG00000030706Mrpl4810085.841ENSSSCG00000014829MRPL4810078.774Sus_scrofa
ENSMUSG00000030706Mrpl4810067.797ENSTGUG00000013469-9957.803Taeniopygia_guttata
ENSMUSG00000030706Mrpl4810067.797ENSTGUG00000016409-10061.702Taeniopygia_guttata
ENSMUSG00000030706Mrpl4810066.102ENSTRUG00000005273mrpl489450.526Takifugu_rubripes
ENSMUSG00000030706Mrpl4810066.102ENSTNIG00000007416mrpl489949.268Tetraodon_nigroviridis
ENSMUSG00000030706Mrpl4810087.611ENSTTRG00000005403MRPL489981.579Tursiops_truncatus
ENSMUSG00000030706Mrpl487989.888ENSUAMG00000017695-7389.888Ursus_americanus
ENSMUSG00000030706Mrpl4810088.496ENSUMAG00000010317MRPL4810082.547Ursus_maritimus
ENSMUSG00000030706Mrpl4810088.496ENSVPAG00000004657MRPL489983.158Vicugna_pacos
ENSMUSG00000030706Mrpl4810091.150ENSVVUG00000024543-10091.150Vulpes_vulpes
ENSMUSG00000030706Mrpl4810066.102ENSXETG00000023199mrpl4810051.923Xenopus_tropicalis
ENSMUSG00000030706Mrpl4810059.322ENSXCOG00000004111mrpl488950.562Xiphophorus_couchianus
ENSMUSG00000030706Mrpl4810059.322ENSXMAG00000011518mrpl489049.474Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003674molecular_function-NDFunction
GO:0005739mitochondrion18614015.HDAComponent
GO:0005739mitochondrion-ISOComponent
GO:0005761mitochondrial ribosome21873635.IBAComponent
GO:0005761mitochondrial ribosome-ISOComponent
GO:0005762mitochondrial large ribosomal subunit-ISOComponent
GO:0008150biological_process-NDProcess

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