EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000030795 (Gene tree)
Gene ID: 233908
Gene Symbol: Fus
Alias: D430004D17Rik|D930039C12Rik|Tls|hnRNP P2|pigpen|translocated in liposarcoma
Full Name: fused in sarcoma
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 18245 bases
Position: chr7:127967457-127985701
Accession: 1353633
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000134447	zf-RanBP	PF00641.18	9.2e-13	1	1
ENSMUSP00000133820	zf-RanBP	PF00641.18	1.3e-12	1	1
ENSMUSP00000112721	zf-RanBP	PF00641.18	4e-12	1	1
ENSMUSP00000076801	zf-RanBP	PF00641.18	8.8e-12	1	1
ENSMUSP00000101858	zf-RanBP	PF00641.18	8.9e-12	1	1
ENSMUSP00000101858	RRM_1	PF00076.22	1.3e-10	1	1
ENSMUSP00000076801	RRM_1	PF00076.22	1.3e-10	1	1
ENSMUSP00000133820	RRM_1	PF00076.22	3.4e-07	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000137464	-	354	-	-	- (aa)	-	-
ENSMUST00000141997	-	761	-	ENSMUSP00000134447	104 (aa)	-	G3UZD2
ENSMUST00000205351	-	2055	-	-	- (aa)	-	-
ENSMUST00000136289	-	600	-	-	- (aa)	-	-
ENSMUST00000128851	-	4909	-	-	- (aa)	-	-
ENSMUST00000154843	-	600	-	-	- (aa)	-	-
ENSMUST00000174196	-	2374	-	-	- (aa)	-	-
ENSMUST00000172755	-	670	-	-	- (aa)	-	-
ENSMUST00000121616	-	1102	-	ENSMUSP00000112721	280 (aa)	-	Q91VQ2
ENSMUST00000106251	-	5536	-	ENSMUSP00000101858	518 (aa)	-	P56959
ENSMUST00000205261	-	1859	-	-	- (aa)	-	-
ENSMUST00000123151	-	2158	-	-	- (aa)	-	-
ENSMUST00000077609	-	1831	XM_006507759	ENSMUSP00000076801	517 (aa)	XP_006507822	Q8CFQ9
ENSMUST00000155941	-	516	-	-	- (aa)	-	-
ENSMUST00000079045	-	2623	-	ENSMUSP00000078054	122 (aa)	-	Q8BNR3
ENSMUST00000174632	-	390	-	ENSMUSP00000133820	130 (aa)	-	G3UXT7

Gene Model

Click here to download ENSMUSG00000030795's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu05202	Transcriptional misregulation in cancer	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000030795's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMUSG00000030795	Fus	93	54.658	ENSMUSG00000020680	Taf15	71	54.878

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000030795	Fus	99	99.038	ENSG00000089280	FUS	100	94.707	Homo_sapiens
ENSMUSG00000030795	Fus	80	63.934	ENSAPOG00000009426	-	56	57.143	Acanthochromis_polyacanthus
ENSMUSG00000030795	Fus	99	96.705	ENSAMEG00000007181	FUS	100	96.705	Ailuropoda_melanoleuca
ENSMUSG00000030795	Fus	99	99.038	ENSANAG00000021591	-	100	96.015	Aotus_nancymaae
ENSMUSG00000030795	Fus	99	99.038	ENSBTAG00000005757	FUS	100	95.560	Bos_taurus
ENSMUSG00000030795	Fus	99	99.038	ENSCJAG00000003169	FUS	100	95.429	Callithrix_jacchus
ENSMUSG00000030795	Fus	100	97.115	ENSCAFG00000016862	FUS	100	97.115	Canis_familiaris
ENSMUSG00000030795	Fus	99	98.077	ENSCAFG00020018210	FUS	100	96.146	Canis_lupus_dingo
ENSMUSG00000030795	Fus	99	99.038	ENSCHIG00000004508	FUS	100	96.724	Capra_hircus
ENSMUSG00000030795	Fus	99	99.038	ENSTSYG00000011757	FUS	100	96.532	Carlito_syrichta
ENSMUSG00000030795	Fus	99	99.038	ENSCPOG00000038302	FUS	100	96.441	Cavia_porcellus
ENSMUSG00000030795	Fus	99	99.038	ENSCCAG00000019778	FUS	100	95.825	Cebus_capucinus
ENSMUSG00000030795	Fus	99	99.038	ENSCATG00000034413	FUS	50	93.962	Cercocebus_atys
ENSMUSG00000030795	Fus	100	98.651	ENSCLAG00000010457	FUS	100	98.651	Chinchilla_lanigera
ENSMUSG00000030795	Fus	99	99.038	ENSCSAG00000005711	FUS	50	93.962	Chlorocebus_sabaeus
ENSMUSG00000030795	Fus	62	95.312	ENSCHOG00000010780	FUS	50	96.629	Choloepus_hoffmanni
ENSMUSG00000030795	Fus	100	99.643	ENSCGRG00001016216	Fus	100	99.643	Cricetulus_griseus_chok1gshd
ENSMUSG00000030795	Fus	100	99.286	ENSCGRG00000012106	Fus	100	99.286	Cricetulus_griseus_crigri
ENSMUSG00000030795	Fus	100	97.110	ENSDNOG00000017091	FUS	100	97.110	Dasypus_novemcinctus
ENSMUSG00000030795	Fus	100	98.844	ENSDORG00000014218	Fus	100	98.844	Dipodomys_ordii
ENSMUSG00000030795	Fus	100	91.908	ENSEASG00005011180	-	51	87.594	Equus_asinus_asinus
ENSMUSG00000030795	Fus	99	99.038	ENSEEUG00000004934	FUS	91	99.635	Erinaceus_europaeus
ENSMUSG00000030795	Fus	100	97.692	ENSFCAG00000027928	FUS	100	97.692	Felis_catus
ENSMUSG00000030795	Fus	99	99.038	ENSFDAG00000007552	FUS	100	97.688	Fukomys_damarensis
ENSMUSG00000030795	Fus	99	99.038	ENSGGOG00000003707	FUS	63	96.262	Gorilla_gorilla
ENSMUSG00000030795	Fus	99	99.038	ENSHGLG00000017008	-	100	96.339	Heterocephalus_glaber_female
ENSMUSG00000030795	Fus	99	99.038	ENSHGLG00100006254	-	100	96.085	Heterocephalus_glaber_male
ENSMUSG00000030795	Fus	98	99.029	ENSSTOG00000005943	FUS	100	91.287	Ictidomys_tridecemlineatus
ENSMUSG00000030795	Fus	100	98.932	ENSJJAG00000011802	Fus	100	98.932	Jaculus_jaculus
ENSMUSG00000030795	Fus	80	58.268	ENSLBEG00000027571	-	57	57.090	Labrus_bergylta
ENSMUSG00000030795	Fus	99	99.038	ENSLAFG00000001643	FUS	100	94.662	Loxodonta_africana
ENSMUSG00000030795	Fus	99	99.038	ENSMMUG00000019637	FUS	55	93.822	Macaca_mulatta
ENSMUSG00000030795	Fus	99	99.038	ENSMNEG00000027646	FUS	99	77.476	Macaca_nemestrina
ENSMUSG00000030795	Fus	99	99.038	ENSMLEG00000038040	FUS	51	93.609	Mandrillus_leucophaeus
ENSMUSG00000030795	Fus	100	99.421	ENSMAUG00000009599	Fus	100	99.421	Mesocricetus_auratus
ENSMUSG00000030795	Fus	99	99.038	ENSMICG00000033962	FUS	100	96.917	Microcebus_murinus
ENSMUSG00000030795	Fus	100	99.643	ENSMOCG00000006871	-	100	99.643	Microtus_ochrogaster
ENSMUSG00000030795	Fus	99	98.058	ENSMOCG00000019180	-	75	96.970	Microtus_ochrogaster
ENSMUSG00000030795	Fus	99	98.077	ENSMODG00000001889	FUS	50	92.830	Monodelphis_domestica
ENSMUSG00000030795	Fus	100	99.807	MGP_CAROLIEiJ_G0030533	Fus	100	100.000	Mus_caroli
ENSMUSG00000030795	Fus	100	99.807	MGP_PahariEiJ_G0013740	Fus	100	100.000	Mus_pahari
ENSMUSG00000030795	Fus	100	99.807	MGP_SPRETEiJ_G0031647	Fus	100	100.000	Mus_spretus
ENSMUSG00000030795	Fus	99	98.077	ENSMPUG00000011426	-	98	96.731	Mustela_putorius_furo
ENSMUSG00000030795	Fus	99	98.077	ENSMLUG00000004806	-	100	96.117	Myotis_lucifugus
ENSMUSG00000030795	Fus	99	100.000	ENSNGAG00000023361	-	100	97.857	Nannospalax_galili
ENSMUSG00000030795	Fus	99	99.038	ENSNLEG00000016218	FUS	51	93.609	Nomascus_leucogenys
ENSMUSG00000030795	Fus	98	97.087	ENSMEUG00000000968	FUS	57	97.872	Notamacropus_eugenii
ENSMUSG00000030795	Fus	85	91.629	ENSODEG00000004833	-	100	85.521	Octodon_degus
ENSMUSG00000030795	Fus	100	98.073	ENSODEG00000015325	-	100	98.073	Octodon_degus
ENSMUSG00000030795	Fus	99	98.077	ENSODEG00000007263	-	100	89.808	Octodon_degus
ENSMUSG00000030795	Fus	78	71.223	ENSOANG00000005606	FUS	51	90.530	Ornithorhynchus_anatinus
ENSMUSG00000030795	Fus	89	97.872	ENSOCUG00000021526	FUS	51	97.561	Oryctolagus_cuniculus
ENSMUSG00000030795	Fus	80	63.636	ENSORLG00020014824	-	54	56.015	Oryzias_latipes_hni
ENSMUSG00000030795	Fus	80	63.934	ENSORLG00015022673	-	54	55.639	Oryzias_latipes_hsok
ENSMUSG00000030795	Fus	88	97.849	ENSOARG00000002203	-	99	99.200	Ovis_aries
ENSMUSG00000030795	Fus	99	99.038	ENSPPAG00000029090	FUS	100	92.100	Pan_paniscus
ENSMUSG00000030795	Fus	100	97.692	ENSPPRG00000004170	FUS	100	97.692	Panthera_pardus
ENSMUSG00000030795	Fus	100	97.303	ENSPTIG00000012151	FUS	100	97.303	Panthera_tigris_altaica
ENSMUSG00000030795	Fus	99	99.038	ENSPTRG00000008038	FUS	51	93.609	Pan_troglodytes
ENSMUSG00000030795	Fus	99	99.038	ENSPANG00000021275	FUS	50	93.962	Papio_anubis
ENSMUSG00000030795	Fus	80	69.178	ENSPSIG00000009438	FUS	97	82.721	Pelodiscus_sinensis
ENSMUSG00000030795	Fus	100	99.807	ENSPEMG00000023119	Fus	100	99.807	Peromyscus_maniculatus_bairdii
ENSMUSG00000030795	Fus	96	84.756	ENSPCIG00000015897	FUS	50	84.756	Phascolarctos_cinereus
ENSMUSG00000030795	Fus	67	95.726	ENSPCAG00000007167	FUS	100	95.726	Procavia_capensis
ENSMUSG00000030795	Fus	99	99.038	ENSPCOG00000022295	FUS	99	81.589	Propithecus_coquereli
ENSMUSG00000030795	Fus	99	98.077	ENSPVAG00000003097	FUS	100	85.714	Pteropus_vampyrus
ENSMUSG00000030795	Fus	100	99.614	ENSRNOG00000023360	Fus	100	99.614	Rattus_norvegicus
ENSMUSG00000030795	Fus	99	99.038	ENSRBIG00000042196	FUS	51	93.609	Rhinopithecus_bieti
ENSMUSG00000030795	Fus	99	99.038	ENSSBOG00000034540	FUS	100	94.915	Saimiri_boliviensis_boliviensis
ENSMUSG00000030795	Fus	96	93.865	ENSSHAG00000011874	FUS	85	92.188	Sarcophilus_harrisii
ENSMUSG00000030795	Fus	86	62.308	ENSSDUG00000000075	-	54	55.263	Seriola_dumerili
ENSMUSG00000030795	Fus	80	63.415	ENSSLDG00000020220	-	54	54.135	Seriola_lalandi_dorsalis
ENSMUSG00000030795	Fus	91	59.281	ENSSPUG00000007180	-	53	62.814	Sphenodon_punctatus
ENSMUSG00000030795	Fus	80	64.463	ENSSPAG00000010572	-	54	54.887	Stegastes_partitus
ENSMUSG00000030795	Fus	99	98.077	ENSSSCG00000030798	FUS	100	96.176	Sus_scrofa
ENSMUSG00000030795	Fus	99	99.038	ENSTTRG00000015559	FUS	53	96.000	Tursiops_truncatus
ENSMUSG00000030795	Fus	99	98.077	ENSUAMG00000008533	FUS	100	96.146	Ursus_americanus
ENSMUSG00000030795	Fus	99	98.077	ENSVVUG00000027797	-	50	95.327	Vulpes_vulpes
ENSMUSG00000030795	Fus	78	70.714	ENSXETG00000001951	fus	50	75.373	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005634	nucleus	12950080.	IDA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	12950080.	IDA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005844	polysome	-	ISO	Component
GO:0030331	estrogen receptor binding	-	ISO	Function
GO:0030425	dendrite	-	ISO	Component
GO:0031489	myosin V binding	-	ISO	Function
GO:0035255	ionotropic glutamate receptor binding	-	ISO	Function
GO:0043025	neuronal cell body	-	ISO	Component
GO:0043197	dendritic spine	-	ISO	Component
GO:0043204	perikaryon	-	ISO	Component
GO:0044327	dendritic spine head	-	ISO	Component
GO:0046965	retinoid X receptor binding	-	ISO	Function
GO:0046966	thyroid hormone receptor binding	-	ISO	Function
GO:0048471	perinuclear region of cytoplasm	-	ISO	Component
GO:0071277	cellular response to calcium ion	-	ISO	Process