EuRBPDB

Description

RBDs

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000030879 (Gene tree)
Gene ID: 27397
Gene Symbol: Mrpl17
Alias: MRP-L26|Rpml26
Full Name: mitochondrial ribosomal protein L17
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 7894 bases
Position: chr7:105803206-105811099
Accession: 1351608
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000117971	Ribosomal_L17	PF01196.19	3.2e-25	1	1
ENSMUSP00000148082	Ribosomal_L17	PF01196.19	2.3e-11	1	1
ENSMUSP00000134784	Ribosomal_L17	PF01196.19	6.9e-11	1	1
ENSMUSP00000147523	Ribosomal_L17	PF01196.19	9.2e-11	1	1

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000176887	-	380	-	ENSMUSP00000134784	111 (aa)	-	H3BIZ3
ENSMUST00000176498	-	459	-	ENSMUSP00000148082	122 (aa)	-	A0A1B0GSV1
ENSMUST00000124482	-	7300	-	ENSMUSP00000117971	176 (aa)	-	Q9D8P4
ENSMUST00000033170	-	1028	-	ENSMUSP00000147523	116 (aa)	-	Q9D8P4
ENSMUST00000176158	-	869	-	ENSMUSP00000135121	109 (aa)	-	H3BJT9

Gene Model

Click here to download ENSMUSG00000030879's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000030879's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000030879	Mrpl17	99	85.057	ENSG00000158042	MRPL17	99	85.057	Homo_sapiens
ENSMUSG00000030879	Mrpl17	100	59.459	ENSAPOG00000014937	mrpl17	81	72.388	Acanthochromis_polyacanthus
ENSMUSG00000030879	Mrpl17	99	86.207	ENSAMEG00000016246	MRPL17	99	82.184	Ailuropoda_melanoleuca
ENSMUSG00000030879	Mrpl17	57	38.614	ENSACIG00000010456	-	71	38.614	Amphilophus_citrinellus
ENSMUSG00000030879	Mrpl17	100	59.459	ENSACIG00000011247	mrpl17	81	72.388	Amphilophus_citrinellus
ENSMUSG00000030879	Mrpl17	94	66.061	ENSAOCG00000009243	mrpl17	81	73.134	Amphiprion_ocellaris
ENSMUSG00000030879	Mrpl17	94	66.061	ENSAPEG00000009301	mrpl17	81	73.134	Amphiprion_percula
ENSMUSG00000030879	Mrpl17	100	58.559	ENSATEG00000018777	mrpl17	82	71.642	Anabas_testudineus
ENSMUSG00000030879	Mrpl17	89	75.000	ENSACAG00000009480	MRPL17	82	76.761	Anolis_carolinensis
ENSMUSG00000030879	Mrpl17	99	86.207	ENSANAG00000019957	MRPL17	99	86.207	Aotus_nancymaae
ENSMUSG00000030879	Mrpl17	100	59.459	ENSACLG00000027400	mrpl17	81	71.642	Astatotilapia_calliptera
ENSMUSG00000030879	Mrpl17	100	63.063	ENSAMXG00000015294	mrpl17	81	72.535	Astyanax_mexicanus
ENSMUSG00000030879	Mrpl17	57	81.159	ENSBTAG00000049294	-	56	81.429	Bos_taurus
ENSMUSG00000030879	Mrpl17	100	85.227	ENSBTAG00000024781	MRPL17	100	80.682	Bos_taurus
ENSMUSG00000030879	Mrpl17	75	34.483	WBGene00021829	mrpl-17	65	36.220	Caenorhabditis_elegans
ENSMUSG00000030879	Mrpl17	99	85.057	ENSCJAG00000038483	MRPL17	99	85.057	Callithrix_jacchus
ENSMUSG00000030879	Mrpl17	99	85.057	ENSCAFG00000006589	MRPL17	82	82.759	Canis_familiaris
ENSMUSG00000030879	Mrpl17	99	85.057	ENSCAFG00020009746	MRPL17	99	82.759	Canis_lupus_dingo
ENSMUSG00000030879	Mrpl17	100	84.091	ENSCHIG00000015842	MRPL17	100	80.114	Capra_hircus
ENSMUSG00000030879	Mrpl17	98	88.439	ENSTSYG00000027878	MRPL17	98	88.439	Carlito_syrichta
ENSMUSG00000030879	Mrpl17	99	86.857	ENSCPOG00000032658	MRPL17	99	86.857	Cavia_porcellus
ENSMUSG00000030879	Mrpl17	99	86.207	ENSCCAG00000025049	MRPL17	99	86.207	Cebus_capucinus
ENSMUSG00000030879	Mrpl17	99	85.714	ENSCATG00000035650	MRPL17	99	85.714	Cercocebus_atys
ENSMUSG00000030879	Mrpl17	98	85.549	ENSCLAG00000015854	MRPL17	98	85.549	Chinchilla_lanigera
ENSMUSG00000030879	Mrpl17	97	86.471	ENSCSAG00000004367	MRPL17	91	86.471	Chlorocebus_sabaeus
ENSMUSG00000030879	Mrpl17	97	69.274	ENSCPBG00000000499	MRPL17	78	78.417	Chrysemys_picta_bellii
ENSMUSG00000030879	Mrpl17	90	36.283	ENSCING00000004204	-	79	40.152	Ciona_intestinalis
ENSMUSG00000030879	Mrpl17	85	38.816	ENSCSAVG00000011072	-	81	40.909	Ciona_savignyi
ENSMUSG00000030879	Mrpl17	99	84.571	ENSCANG00000042315	MRPL17	99	84.571	Colobus_angolensis_palliatus
ENSMUSG00000030879	Mrpl17	93	86.408	ENSCGRG00001019088	-	100	81.250	Cricetulus_griseus_chok1gshd
ENSMUSG00000030879	Mrpl17	78	86.316	ENSCGRG00001018404	-	100	86.316	Cricetulus_griseus_chok1gshd
ENSMUSG00000030879	Mrpl17	100	90.909	ENSCGRG00000004658	Mrpl17	100	90.909	Cricetulus_griseus_crigri
ENSMUSG00000030879	Mrpl17	100	61.261	ENSCSEG00000015170	mrpl17	79	73.134	Cynoglossus_semilaevis
ENSMUSG00000030879	Mrpl17	100	61.261	ENSCVAG00000015116	mrpl17	85	71.831	Cyprinodon_variegatus
ENSMUSG00000030879	Mrpl17	100	63.964	ENSDARG00000075677	mrpl17	81	73.881	Danio_rerio
ENSMUSG00000030879	Mrpl17	97	83.146	ENSDNOG00000047312	-	57	91.608	Dasypus_novemcinctus
ENSMUSG00000030879	Mrpl17	99	86.286	ENSDORG00000026555	Mrpl17	99	86.286	Dipodomys_ordii
ENSMUSG00000030879	Mrpl17	99	85.057	ENSETEG00000008580	MRPL17	99	85.057	Echinops_telfairi
ENSMUSG00000030879	Mrpl17	100	55.856	ENSEBUG00000013244	mrpl17	70	62.590	Eptatretus_burgeri
ENSMUSG00000030879	Mrpl17	99	86.782	ENSEASG00005003093	MRPL17	99	82.759	Equus_asinus_asinus
ENSMUSG00000030879	Mrpl17	99	86.782	ENSECAG00000010156	MRPL17	99	82.759	Equus_caballus
ENSMUSG00000030879	Mrpl17	99	82.184	ENSEEUG00000013026	MRPL17	83	88.028	Erinaceus_europaeus
ENSMUSG00000030879	Mrpl17	100	58.559	ENSELUG00000020191	mrpl17	84	68.085	Esox_lucius
ENSMUSG00000030879	Mrpl17	99	87.356	ENSFCAG00000036047	MRPL17	85	83.333	Felis_catus
ENSMUSG00000030879	Mrpl17	99	88.571	ENSFDAG00000013150	MRPL17	99	88.571	Fukomys_damarensis
ENSMUSG00000030879	Mrpl17	100	60.360	ENSFHEG00000006763	mrpl17	85	71.127	Fundulus_heteroclitus
ENSMUSG00000030879	Mrpl17	99	63.793	ENSGMOG00000013596	mrpl17	99	63.793	Gadus_morhua
ENSMUSG00000030879	Mrpl17	89	78.205	ENSGALG00000002605	MRPL17	87	79.577	Gallus_gallus
ENSMUSG00000030879	Mrpl17	100	61.261	ENSGAFG00000010332	mrpl17	80	73.134	Gambusia_affinis
ENSMUSG00000030879	Mrpl17	100	61.261	ENSGACG00000003236	mrpl17	79	72.388	Gasterosteus_aculeatus
ENSMUSG00000030879	Mrpl17	81	63.551	ENSGAGG00000000396	MRPL17	64	78.261	Gopherus_agassizii
ENSMUSG00000030879	Mrpl17	99	83.908	ENSGGOG00000038003	MRPL17	99	83.908	Gorilla_gorilla
ENSMUSG00000030879	Mrpl17	100	59.459	ENSHBUG00000017678	mrpl17	81	71.642	Haplochromis_burtoni
ENSMUSG00000030879	Mrpl17	99	88.571	ENSHGLG00000006859	MRPL17	99	88.571	Heterocephalus_glaber_female
ENSMUSG00000030879	Mrpl17	99	88.571	ENSHGLG00100013588	MRPL17	99	88.571	Heterocephalus_glaber_male
ENSMUSG00000030879	Mrpl17	100	61.261	ENSHCOG00000011399	mrpl17	86	71.831	Hippocampus_comes
ENSMUSG00000030879	Mrpl17	100	63.063	ENSIPUG00000018383	MRPL17	79	73.881	Ictalurus_punctatus
ENSMUSG00000030879	Mrpl17	100	81.081	ENSSTOG00000003313	-	100	81.081	Ictidomys_tridecemlineatus
ENSMUSG00000030879	Mrpl17	100	90.909	ENSJJAG00000022535	Mrpl17	100	90.909	Jaculus_jaculus
ENSMUSG00000030879	Mrpl17	100	61.261	ENSKMAG00000011240	mrpl17	81	73.881	Kryptolebias_marmoratus
ENSMUSG00000030879	Mrpl17	100	60.360	ENSLBEG00000003781	mrpl17	81	73.881	Labrus_bergylta
ENSMUSG00000030879	Mrpl17	89	70.064	ENSLACG00000015317	MRPL17	79	71.831	Latimeria_chalumnae
ENSMUSG00000030879	Mrpl17	100	63.063	ENSLOCG00000004435	mrpl17	81	76.866	Lepisosteus_oculatus
ENSMUSG00000030879	Mrpl17	99	86.782	ENSLAFG00000004834	MRPL17	99	86.782	Loxodonta_africana
ENSMUSG00000030879	Mrpl17	99	85.714	ENSMFAG00000005488	MRPL17	99	85.714	Macaca_fascicularis
ENSMUSG00000030879	Mrpl17	99	85.714	ENSMMUG00000004544	MRPL17	99	85.714	Macaca_mulatta
ENSMUSG00000030879	Mrpl17	99	85.714	ENSMNEG00000031071	MRPL17	99	85.714	Macaca_nemestrina
ENSMUSG00000030879	Mrpl17	99	85.714	ENSMLEG00000040344	MRPL17	99	85.714	Mandrillus_leucophaeus
ENSMUSG00000030879	Mrpl17	100	58.559	ENSMAMG00000005242	mrpl17	79	70.896	Mastacembelus_armatus
ENSMUSG00000030879	Mrpl17	100	59.459	ENSMZEG00005003468	mrpl17	81	71.642	Maylandia_zebra
ENSMUSG00000030879	Mrpl17	100	92.793	ENSMAUG00000005494	Mrpl17	100	92.793	Mesocricetus_auratus
ENSMUSG00000030879	Mrpl17	99	84.483	ENSMICG00000035814	MRPL17	99	87.931	Microcebus_murinus
ENSMUSG00000030879	Mrpl17	100	93.182	ENSMOCG00000018077	Mrpl17	100	93.182	Microtus_ochrogaster
ENSMUSG00000030879	Mrpl17	100	62.162	ENSMMOG00000015377	mrpl17	81	74.627	Mola_mola
ENSMUSG00000030879	Mrpl17	100	75.676	ENSMODG00000018267	MRPL17	89	86.620	Monodelphis_domestica
ENSMUSG00000030879	Mrpl17	100	59.459	ENSMALG00000013904	mrpl17	81	71.642	Monopterus_albus
ENSMUSG00000030879	Mrpl17	100	99.432	MGP_CAROLIEiJ_G0030241	Mrpl17	100	99.432	Mus_caroli
ENSMUSG00000030879	Mrpl17	100	98.295	MGP_PahariEiJ_G0013456	Mrpl17	100	98.295	Mus_pahari
ENSMUSG00000030879	Mrpl17	100	100.000	MGP_SPRETEiJ_G0031353	Mrpl17	100	100.000	Mus_spretus
ENSMUSG00000030879	Mrpl17	99	83.908	ENSMPUG00000018502	-	99	81.609	Mustela_putorius_furo
ENSMUSG00000030879	Mrpl17	99	86.207	ENSMPUG00000005449	-	80	82.184	Mustela_putorius_furo
ENSMUSG00000030879	Mrpl17	100	85.227	ENSMLUG00000001144	MRPL17	100	80.682	Myotis_lucifugus
ENSMUSG00000030879	Mrpl17	100	90.909	ENSNGAG00000012128	Mrpl17	100	90.909	Nannospalax_galili
ENSMUSG00000030879	Mrpl17	100	59.459	ENSNBRG00000015689	mrpl17	81	71.642	Neolamprologus_brichardi
ENSMUSG00000030879	Mrpl17	99	85.632	ENSNLEG00000032707	MRPL17	99	85.632	Nomascus_leucogenys
ENSMUSG00000030879	Mrpl17	90	81.761	ENSMEUG00000013588	-	89	83.099	Notamacropus_eugenii
ENSMUSG00000030879	Mrpl17	98	87.283	ENSOPRG00000008141	MRPL17	81	93.662	Ochotona_princeps
ENSMUSG00000030879	Mrpl17	99	84.000	ENSODEG00000009556	MRPL17	99	84.000	Octodon_degus
ENSMUSG00000030879	Mrpl17	100	59.459	ENSONIG00000011427	mrpl17	81	71.642	Oreochromis_niloticus
ENSMUSG00000030879	Mrpl17	83	75.248	ENSOANG00000007173	-	78	69.307	Ornithorhynchus_anatinus
ENSMUSG00000030879	Mrpl17	100	85.795	ENSOCUG00000005726	MRPL17	100	85.795	Oryctolagus_cuniculus
ENSMUSG00000030879	Mrpl17	100	62.162	ENSORLG00000028920	mrpl17	81	73.134	Oryzias_latipes
ENSMUSG00000030879	Mrpl17	100	62.162	ENSORLG00020000015	mrpl17	81	73.134	Oryzias_latipes_hni
ENSMUSG00000030879	Mrpl17	100	62.162	ENSORLG00015005891	mrpl17	81	73.134	Oryzias_latipes_hsok
ENSMUSG00000030879	Mrpl17	100	57.658	ENSOMEG00000019409	mrpl17	81	70.149	Oryzias_melastigma
ENSMUSG00000030879	Mrpl17	99	85.143	ENSOGAG00000014856	MRPL17	99	85.143	Otolemur_garnettii
ENSMUSG00000030879	Mrpl17	100	85.227	ENSOARG00000016577	MRPL17	100	81.250	Ovis_aries
ENSMUSG00000030879	Mrpl17	99	84.483	ENSPPAG00000038749	MRPL17	99	84.483	Pan_paniscus
ENSMUSG00000030879	Mrpl17	99	87.356	ENSPPRG00000022075	MRPL17	99	83.333	Panthera_pardus
ENSMUSG00000030879	Mrpl17	99	87.931	ENSPTIG00000014738	MRPL17	85	83.908	Panthera_tigris_altaica
ENSMUSG00000030879	Mrpl17	99	84.483	ENSPTRG00000044450	MRPL17	99	84.483	Pan_troglodytes
ENSMUSG00000030879	Mrpl17	99	85.714	ENSPANG00000025791	MRPL17	99	85.714	Papio_anubis
ENSMUSG00000030879	Mrpl17	100	57.658	ENSPKIG00000021330	mrpl17	85	68.794	Paramormyrops_kingsleyae
ENSMUSG00000030879	Mrpl17	100	62.162	ENSPMGG00000018670	mrpl17	81	74.627	Periophthalmus_magnuspinnatus
ENSMUSG00000030879	Mrpl17	100	96.591	ENSPEMG00000012735	Mrpl17	100	96.591	Peromyscus_maniculatus_bairdii
ENSMUSG00000030879	Mrpl17	93	82.927	ENSPCIG00000010796	MRPL17	86	85.915	Phascolarctos_cinereus
ENSMUSG00000030879	Mrpl17	100	61.261	ENSPFOG00000003148	mrpl17	80	73.134	Poecilia_formosa
ENSMUSG00000030879	Mrpl17	100	61.261	ENSPLAG00000007818	mrpl17	80	73.134	Poecilia_latipinna
ENSMUSG00000030879	Mrpl17	100	61.261	ENSPMEG00000011833	mrpl17	80	73.134	Poecilia_mexicana
ENSMUSG00000030879	Mrpl17	100	60.360	ENSPREG00000014661	mrpl17	80	72.388	Poecilia_reticulata
ENSMUSG00000030879	Mrpl17	99	84.483	ENSPPYG00000003534	MRPL17	99	84.483	Pongo_abelii
ENSMUSG00000030879	Mrpl17	99	88.000	ENSPCAG00000018837	-	99	88.000	Procavia_capensis
ENSMUSG00000030879	Mrpl17	99	88.000	ENSPCAG00000018799	-	99	88.000	Procavia_capensis
ENSMUSG00000030879	Mrpl17	100	87.500	ENSPCOG00000014817	-	100	87.500	Propithecus_coquereli
ENSMUSG00000030879	Mrpl17	96	79.487	ENSPCOG00000011215	-	98	67.630	Propithecus_coquereli
ENSMUSG00000030879	Mrpl17	99	83.333	ENSPVAG00000006422	MRPL17	99	79.310	Pteropus_vampyrus
ENSMUSG00000030879	Mrpl17	100	59.459	ENSPNYG00000015200	mrpl17	81	71.642	Pundamilia_nyererei
ENSMUSG00000030879	Mrpl17	100	63.964	ENSPNAG00000026698	mrpl17	85	72.535	Pygocentrus_nattereri
ENSMUSG00000030879	Mrpl17	100	97.727	ENSRNOG00000019497	Mrpl17	100	97.727	Rattus_norvegicus
ENSMUSG00000030879	Mrpl17	100	73.874	ENSRBIG00000040233	MRPL17	98	85.976	Rhinopithecus_bieti
ENSMUSG00000030879	Mrpl17	100	74.775	ENSRROG00000032283	MRPL17	96	86.585	Rhinopithecus_roxellana
ENSMUSG00000030879	Mrpl17	64	30.328	YJL063C	MRPL8	51	30.328	Saccharomyces_cerevisiae
ENSMUSG00000030879	Mrpl17	99	85.632	ENSSBOG00000031626	MRPL17	99	85.632	Saimiri_boliviensis_boliviensis
ENSMUSG00000030879	Mrpl17	89	85.256	ENSSHAG00000010208	MRPL17	86	85.211	Sarcophilus_harrisii
ENSMUSG00000030879	Mrpl17	100	62.162	ENSSFOG00015021634	mrpl17	85	72.340	Scleropages_formosus
ENSMUSG00000030879	Mrpl17	100	58.559	ENSSMAG00000006719	mrpl17	81	69.403	Scophthalmus_maximus
ENSMUSG00000030879	Mrpl17	100	59.459	ENSSDUG00000001234	mrpl17	81	73.134	Seriola_dumerili
ENSMUSG00000030879	Mrpl17	100	59.459	ENSSLDG00000000596	mrpl17	81	73.134	Seriola_lalandi_dorsalis
ENSMUSG00000030879	Mrpl17	89	78.344	ENSSPUG00000015486	MRPL17	84	80.142	Sphenodon_punctatus
ENSMUSG00000030879	Mrpl17	100	61.261	ENSSPAG00000000386	mrpl17	85	71.127	Stegastes_partitus
ENSMUSG00000030879	Mrpl17	99	86.782	ENSSSCG00000024693	MRPL17	99	82.759	Sus_scrofa
ENSMUSG00000030879	Mrpl17	89	78.205	ENSTGUG00000001893	MRPL17	86	78.873	Taeniopygia_guttata
ENSMUSG00000030879	Mrpl17	100	59.524	ENSTRUG00000022925	mrpl17	86	59.172	Takifugu_rubripes
ENSMUSG00000030879	Mrpl17	100	60.360	ENSTNIG00000008195	mrpl17	85	73.881	Tetraodon_nigroviridis
ENSMUSG00000030879	Mrpl17	99	86.857	ENSTTRG00000004903	MRPL17	99	86.286	Tursiops_truncatus
ENSMUSG00000030879	Mrpl17	99	86.782	ENSUAMG00000025644	MRPL17	80	82.759	Ursus_americanus
ENSMUSG00000030879	Mrpl17	99	86.782	ENSUMAG00000000411	MRPL17	80	82.759	Ursus_maritimus
ENSMUSG00000030879	Mrpl17	97	85.294	ENSVPAG00000008874	MRPL17	98	81.176	Vicugna_pacos
ENSMUSG00000030879	Mrpl17	99	86.207	ENSVVUG00000024084	MRPL17	78	82.184	Vulpes_vulpes
ENSMUSG00000030879	Mrpl17	86	64.474	ENSXETG00000027295	mrpl17	83	63.830	Xenopus_tropicalis
ENSMUSG00000030879	Mrpl17	99	63.793	ENSXCOG00000019115	mrpl17	81	74.627	Xiphophorus_couchianus
ENSMUSG00000030879	Mrpl17	100	62.162	ENSXMAG00000006741	mrpl17	81	73.134	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000002	mitochondrial genome maintenance	10593885.	TAS	Process
GO:0003735	structural constituent of ribosome	21873635.	IBA	Function
GO:0003735	structural constituent of ribosome	10593885.	ISA	Function
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005743	mitochondrial inner membrane	12865426.	HDA	Component
GO:0005762	mitochondrial large ribosomal subunit	21873635.	IBA	Component
GO:0005762	mitochondrial large ribosomal subunit	10593885.	ISA	Component
GO:0005762	mitochondrial large ribosomal subunit	-	ISO	Component
GO:0005840	ribosome	-	IEA	Component
GO:0006412	translation	10593885.	ISA	Process
GO:0019904	protein domain specific binding	-	ISO	Function