EuRBPDB

Description

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000150675	-	797	-	-	- (aa)	-	-
ENSMUST00000137808	-	486	-	-	- (aa)	-	-
ENSMUST00000131191	-	606	-	-	- (aa)	-	-
ENSMUST00000123704	-	832	-	-	- (aa)	-	-
ENSMUST00000208400	-	462	-	ENSMUSP00000146732	145 (aa)	-	A0A140LI98
ENSMUST00000033176	-	1896	-	ENSMUSP00000033176	453 (aa)	-	Q9DB77

Gene Model

Pathways

Pathway ID	Pathway Name	Source
mmu00190	Oxidative phosphorylation	KEGG
mmu01100	Metabolic pathways	KEGG
mmu04260	Cardiac muscle contraction	KEGG
mmu04714	Thermogenesis	KEGG
mmu04932	Non-alcoholic fatty liver disease (NAFLD)	KEGG
mmu05010	Alzheimer disease	KEGG
mmu05012	Parkinson disease	KEGG
mmu05016	Huntington disease	KEGG

Protein-Protein Interaction (PPI)

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003824	catalytic activity	-	IEA	Function
GO:0004175	endopeptidase activity	21873635.	IBA	Function
GO:0004222	metalloendopeptidase activity	-	IEA	Function
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005739	mitochondrion	18614015.	HDA	Component
GO:0005739	mitochondrion	21873635.	IBA	Component
GO:0005739	mitochondrion	16103131.16120479.17376863.	IDA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005743	mitochondrial inner membrane	12865426.	HDA	Component
GO:0005743	mitochondrial inner membrane	21873635.	IBA	Component
GO:0005750	mitochondrial respiratory chain complex III	24154540.	IDA	Component
GO:0005750	mitochondrial respiratory chain complex III	-	ISO	Component
GO:0005751	mitochondrial respiratory chain complex IV	-	ISO	Component
GO:0006508	proteolysis	-	IEA	Process
GO:0006627	protein processing involved in protein targeting to mitochondrion	21873635.	IBA	Process
GO:0016020	membrane	-	IEA	Component
GO:0017087	mitochondrial processing peptidase complex	21873635.	IBA	Component
GO:0043209	myelin sheath	17634366.	HDA	Component
GO:0044877	protein-containing complex binding	-	ISO	Function
GO:0046872	metal ion binding	-	IEA	Function
GO:0055114	oxidation-reduction process	-	IEA	Process
GO:0070469	respiratory chain	-	IEA	Component