EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000030980 (Gene tree)
Gene ID: 66356
Gene Symbol: Knop1
Alias: 2310008H09Rik|Tsg118
Full Name: lysine rich nucleolar protein 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 14033
Position: chr7: 118842222-118856254
Accession: 1913606
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000126792	-	3253	-	ENSMUSP00000114727	347 (aa)	-	F6ZLH4
ENSMUST00000152309	-	690	-	ENSMUSP00000117151	192 (aa)	-	D3Z5V3
ENSMUST00000106549	-	1467	-	ENSMUSP00000102159	318 (aa)	-	Q9Z2Q2
ENSMUST00000063607	-	4884	-	ENSMUSP00000068142	370 (aa)	-	K4DI66
ENSMUST00000106550	-	5524	-	ENSMUSP00000102160	532 (aa)	-	H7BX94
ENSMUST00000116280	-	5382	-	ENSMUSP00000111984	532 (aa)	-	H7BX94
ENSMUST00000033277	-	958	-	ENSMUSP00000033277	189 (aa)	-	E9QKQ3

Gene Model

Click here to download ENSMUSG00000030980's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000030980's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000030980	Knop1	100	73.529	ENSG00000103550	KNOP1	100	71.242	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	-	IEA	Component