EuRBPDB

Description

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000211238	-	575	-	ENSMUSP00000147271	192 (aa)	-	A0A1B0GQV9
ENSMUST00000033310	-	10061	XM_006507411	ENSMUSP00000033310	3177 (aa)	XP_006507474	E9PVX6

Gene Model

Protein-Protein Interaction (PPI)

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000031004	Mki67	79	73.881	ENSG00000148773	MKI67	99	73.881	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0000775	chromosome, centromeric region	12355204.	IDA	Component
GO:0000793	condensed chromosome	12355204.	IDA	Component
GO:0000793	condensed chromosome	-	ISO	Component
GO:0003677	DNA binding	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	15237214.16314515.17257418.18604197.19409883.21464233.22984613.23284756.23786676.24191021.24582971.25433207.	IDA	Component
GO:0005634	nucleus	12368262.	ISO	Component
GO:0005694	chromosome	-	IEA	Component
GO:0005730	nucleolus	12355204.15237214.	IDA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005737	cytoplasm	11731231.	IDA	Component
GO:0007049	cell cycle	-	IEA	Process
GO:0007088	regulation of mitotic nuclear division	-	ISO	Process
GO:0008022	protein C-terminus binding	-	ISO	Function
GO:0008283	cell proliferation	12972605.19303854.	IDA	Process
GO:0008283	cell proliferation	26949251.	IMP	Process
GO:0016604	nuclear body	-	ISO	Component
GO:0051321	meiotic cell cycle	12355204.	IDA	Process
GO:0051983	regulation of chromosome segregation	-	ISO	Process
GO:0072574	hepatocyte proliferation	25446530.	IDA	Process
GO:1902275	regulation of chromatin organization	26949251.	IMP	Process
GO:1990705	cholangiocyte proliferation	25446530.	IDA	Process