EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000031010 (Gene tree)
Gene ID: 22284
Gene Symbol: Usp9x
Alias: 5730589N07Rik|Dffrx|Fafl
Full Name: ubiquitin specific peptidase 9%2C X chromosome
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 101831
Position: chrX: 13071498-13173328
Accession: 894681
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000174762	-	820	-	-	- (aa)	-	-
ENSMUST00000169594	-	2772	-	ENSMUSP00000129373	755 (aa)	-	E9PWA9
ENSMUST00000089302	-	11887	XM_006527586	ENSMUSP00000086716	2554 (aa)	XP_006527649	Q4FE56
ENSMUST00000124097	-	2864	-	-	- (aa)	-	-
ENSMUST00000149021	-	523	-	ENSMUSP00000133948	174 (aa)	-	G3UY52
ENSMUST00000139764	-	3019	-	-	- (aa)	-	-
ENSMUST00000133997	-	1452	-	ENSMUSP00000134612	345 (aa)	-	G3UZS3

Gene Model

Click here to download ENSMUSG00000031010's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000031010's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000031010	Usp9x	100	98.808	ENSG00000124486	USP9X	100	98.473	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001701	in utero embryonic development	23861879.	IGI	Process
GO:0001764	neuron migration	24607389.	IMP	Process
GO:0001764	neuron migration	-	ISO	Process
GO:0004197	cysteine-type endopeptidase activity	21873635.	IBA	Function
GO:0004843	thiol-dependent ubiquitin-specific protease activity	21873635.	IBA	Function
GO:0005515	protein binding	17500595.19135894.20339350.29626158.	IPI	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	15509704.	IDA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006508	proteolysis	-	IEA	Process
GO:0006511	ubiquitin-dependent protein catabolic process	-	IEA	Process
GO:0007049	cell cycle	-	IEA	Process
GO:0007059	chromosome segregation	-	IEA	Process
GO:0007179	transforming growth factor beta receptor signaling pathway	-	ISO	Process
GO:0008233	peptidase activity	-	IEA	Function
GO:0008234	cysteine-type peptidase activity	-	IEA	Function
GO:0009791	post-embryonic development	23861879.	IMP	Process
GO:0016579	protein deubiquitination	21873635.	IBA	Process
GO:0016579	protein deubiquitination	18410486.	IMP	Process
GO:0016579	protein deubiquitination	-	ISO	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0021698	cerebellar cortex structural organization	23861879.	IMP	Process
GO:0021766	hippocampus development	23861879.	IMP	Process
GO:0030426	growth cone	-	ISO	Component
GO:0030509	BMP signaling pathway	-	ISO	Process
GO:0031625	ubiquitin protein ligase binding	18410486.	IPI	Function
GO:0036459	thiol-dependent ubiquitinyl hydrolase activity	-	ISO	Function
GO:0042752	regulation of circadian rhythm	-	ISO	Process
GO:0042995	cell projection	-	IEA	Component
GO:0045177	apical part of cell	10704870.	IDA	Component
GO:0048511	rhythmic process	-	IEA	Process
GO:0048675	axon extension	23861879.24607389.	IMP	Process
GO:0048675	axon extension	-	ISO	Process
GO:0050821	protein stabilization	-	ISO	Process
GO:0050856	regulation of T cell receptor signaling pathway	26811477.	ISO	Process
GO:0051301	cell division	-	IEA	Process
GO:0070410	co-SMAD binding	-	ISO	Function
GO:0071560	cellular response to transforming growth factor beta stimulus	23861879.	IMP	Process
GO:0071947	protein deubiquitination involved in ubiquitin-dependent protein catabolic process	29626158.	IMP	Process
GO:0071947	protein deubiquitination involved in ubiquitin-dependent protein catabolic process	-	ISO	Process
GO:0101005	ubiquitinyl hydrolase activity	18410486.	IDA	Function
GO:1901537	positive regulation of DNA demethylation	-	ISO	Process
GO:1990138	neuron projection extension	23861879.	IGI	Process
GO:1990380	Lys48-specific deubiquitinase activity	-	ISO	Function