EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000031157 (Gene tree)
Gene ID: 54633
Gene Symbol: Pqbp1
Alias: Sfc2
Full Name: polyglutamine binding protein 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 4751
Position: chrX: 7894519-7899269
Accession: 1859638
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000154552	-	436	-	ENSMUSP00000114924	100 (aa)	-	A2AER9
ENSMUST00000115655	-	1148	XM_006527654	ENSMUSP00000111319	263 (aa)	XP_006527717	Q91VJ5
ENSMUST00000115654	-	1374	-	ENSMUSP00000111318	263 (aa)	-	Q91VJ5
ENSMUST00000033497	-	1104	-	ENSMUSP00000033497	263 (aa)	-	Q91VJ5
ENSMUST00000156741	-	763	-	ENSMUSP00000123657	236 (aa)	-	A2AER8

Gene Model

Click here to download ENSMUSG00000031157's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000031157's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000380	alternative mRNA splicing, via spliceosome	23512658.	IMP	Process
GO:0000380	alternative mRNA splicing, via spliceosome	-	ISO	Process
GO:0002218	activation of innate immune response	-	ISO	Process
GO:0002230	positive regulation of defense response to virus by host	-	ISO	Process
GO:0002376	immune system process	-	IEA	Process
GO:0003690	double-stranded DNA binding	-	ISO	Function
GO:0005634	nucleus	21933836.	IDA	Component
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	21933836.	IDA	Component
GO:0005813	centrosome	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005929	cilium	-	ISO	Component
GO:0006397	mRNA processing	-	IEA	Process
GO:0008022	protein C-terminus binding	-	ISO	Function
GO:0008380	RNA splicing	-	IEA	Process
GO:0010494	cytoplasmic stress granule	21933836.	IDA	Component
GO:0016607	nuclear speck	23512658.	IDA	Component
GO:0016607	nuclear speck	-	ISO	Component
GO:0031175	neuron projection development	23512658.	IMP	Process
GO:0032481	positive regulation of type I interferon production	-	ISO	Process
GO:0034063	stress granule assembly	21933836.	ISO	Process
GO:0043021	ribonucleoprotein complex binding	-	ISO	Function
GO:0043484	regulation of RNA splicing	-	ISO	Process
GO:0045087	innate immune response	-	IEA	Process
GO:0048814	regulation of dendrite morphogenesis	23512658.	IMP	Process
GO:0051607	defense response to virus	-	ISO	Process
GO:0071360	cellular response to exogenous dsRNA	-	ISO	Process
GO:0071598	neuronal ribonucleoprotein granule	21933836.	IDA	Component
GO:0097546	ciliary base	-	ISO	Component
GO:1902857	positive regulation of non-motile cilium assembly	-	ISO	Process