EuRBPDB

Description

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000148570	-	517	-	ENSMUSP00000123059	172 (aa)	-	B1AXN5
ENSMUST00000112491	-	716	-	ENSMUSP00000108110	211 (aa)	-	B1AXP0
ENSMUST00000112492	-	722	-	ENSMUSP00000108111	135 (aa)	-	B1AXN8
ENSMUST00000033671	-	7244	-	ENSMUSP00000033671	740 (aa)	-	P18654
ENSMUST00000142668	-	382	-	-	- (aa)	-	-
ENSMUST00000126686	-	657	-	ENSMUSP00000118007	34 (aa)	-	B1AXN7
ENSMUST00000156648	-	386	-	ENSMUSP00000115271	129 (aa)	-	F6UG16
ENSMUST00000149939	-	755	-	-	- (aa)	-	-
ENSMUST00000112493	-	3671	XM_006528686	ENSMUSP00000108112	712 (aa)	XP_006528749	B1AXN9

Gene Model

Pathways

Pathway ID	Pathway Name	Source
mmu04010	MAPK signaling pathway	KEGG
mmu04114	Oocyte meiosis	KEGG
mmu04150	mTOR signaling pathway	KEGG
mmu04714	Thermogenesis	KEGG
mmu04720	Long-term potentiation	KEGG
mmu04722	Neurotrophin signaling pathway	KEGG
mmu04914	Progesterone-mediated oocyte maturation	KEGG
mmu04931	Insulin resistance	KEGG

Protein-Protein Interaction (PPI)

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0000287	magnesium ion binding	-	IEA	Function
GO:0002224	toll-like receptor signaling pathway	17906627.	IMP	Process
GO:0004672	protein kinase activity	-	IEA	Function
GO:0004674	protein serine/threonine kinase activity	12016217.	IDA	Function
GO:0004711	ribosomal protein S6 kinase activity	21873635.	IBA	Function
GO:0005515	protein binding	16537434.21041626.	IPI	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0007049	cell cycle	-	IEA	Process
GO:0016301	kinase activity	-	IEA	Function
GO:0016310	phosphorylation	-	IEA	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0019901	protein kinase binding	17906627.	IPI	Function
GO:0032496	response to lipopolysaccharide	17906627.	IMP	Process
GO:0035556	intracellular signal transduction	-	IEA	Process
GO:0043027	cysteine-type endopeptidase inhibitor activity involved in apoptotic process	-	ISO	Function
GO:0043154	negative regulation of cysteine-type endopeptidase activity involved in apoptotic process	-	ISO	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	-	ISO	Process