EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000031578 (Gene tree)
Gene ID: 67920
Gene Symbol: Mak16
Alias: 2600016B03Rik|Rbm13
Full Name: MAK16 homolog
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Minus strand
Length: 9302 bases
Position: chr8:31159463-31168764
Accession: 1915170
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000033983	Ribosomal_L28e	PF01778.17	3.2e-35	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000210278	-	723	-	-	- (aa)	-	-
ENSMUST00000209991	-	757	-	-	- (aa)	-	-
ENSMUST00000210450	-	575	-	-	- (aa)	-	-
ENSMUST00000033983	-	1902	-	ENSMUSP00000033983	296 (aa)	-	Q8BGS0

Gene Model

Click here to download ENSMUSG00000031578's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000031578's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000031578	Mak16	100	87.667	ENSG00000198042	MAK16	97	96.992	Homo_sapiens
ENSMUSG00000031578	Mak16	100	73.770	ENSAPOG00000024252	mak16	99	72.787	Acanthochromis_polyacanthus
ENSMUSG00000031578	Mak16	100	88.255	ENSAMEG00000002852	MAK16	100	87.960	Ailuropoda_melanoleuca
ENSMUSG00000031578	Mak16	98	69.759	ENSACIG00000004962	mak16	98	66.443	Amphilophus_citrinellus
ENSMUSG00000031578	Mak16	98	73.667	ENSAOCG00000018230	mak16	98	74.667	Amphiprion_ocellaris
ENSMUSG00000031578	Mak16	100	74.098	ENSAPEG00000022237	mak16	99	74.754	Amphiprion_percula
ENSMUSG00000031578	Mak16	100	74.747	ENSATEG00000012637	mak16	100	73.401	Anabas_testudineus
ENSMUSG00000031578	Mak16	100	80.537	ENSACAG00000000888	MAK16	100	79.866	Anolis_carolinensis
ENSMUSG00000031578	Mak16	100	87.333	ENSANAG00000030954	MAK16	100	88.000	Aotus_nancymaae
ENSMUSG00000031578	Mak16	100	69.408	ENSACLG00000006342	mak16	100	68.750	Astatotilapia_calliptera
ENSMUSG00000031578	Mak16	100	73.786	ENSAMXG00000033330	mak16	100	73.786	Astyanax_mexicanus
ENSMUSG00000031578	Mak16	100	89.933	ENSBTAG00000033504	MAK16	100	89.933	Bos_taurus
ENSMUSG00000031578	Mak16	79	57.627	WBGene00015811	C16A3.6	100	50.926	Caenorhabditis_elegans
ENSMUSG00000031578	Mak16	100	87.667	ENSCJAG00000048459	MAK16	100	88.333	Callithrix_jacchus
ENSMUSG00000031578	Mak16	99	88.215	ENSCAFG00000006325	MAK16	99	88.215	Canis_familiaris
ENSMUSG00000031578	Mak16	99	87.879	ENSCAFG00020001324	MAK16	99	86.869	Canis_lupus_dingo
ENSMUSG00000031578	Mak16	100	70.470	ENSCHIG00000014271	-	100	67.785	Capra_hircus
ENSMUSG00000031578	Mak16	100	89.933	ENSCHIG00000017057	-	100	89.933	Capra_hircus
ENSMUSG00000031578	Mak16	100	86.957	ENSTSYG00000028100	MAK16	100	87.960	Carlito_syrichta
ENSMUSG00000031578	Mak16	100	87.291	ENSCCAG00000025382	MAK16	100	87.625	Cebus_capucinus
ENSMUSG00000031578	Mak16	100	88.333	ENSCATG00000030566	MAK16	100	89.000	Cercocebus_atys
ENSMUSG00000031578	Mak16	100	88.552	ENSCLAG00000002726	MAK16	100	88.552	Chinchilla_lanigera
ENSMUSG00000031578	Mak16	100	80.201	ENSCHOG00000009081	MAK16	100	80.872	Choloepus_hoffmanni
ENSMUSG00000031578	Mak16	100	81.579	ENSCPBG00000000176	MAK16	100	79.538	Chrysemys_picta_bellii
ENSMUSG00000031578	Mak16	64	75.130	ENSCING00000007225	-	94	74.619	Ciona_intestinalis
ENSMUSG00000031578	Mak16	64	74.093	ENSCSAVG00000005901	-	67	73.604	Ciona_savignyi
ENSMUSG00000031578	Mak16	100	87.667	ENSCANG00000032211	MAK16	100	88.333	Colobus_angolensis_palliatus
ENSMUSG00000031578	Mak16	100	90.333	ENSCGRG00001016542	Mak16	100	90.333	Cricetulus_griseus_chok1gshd
ENSMUSG00000031578	Mak16	100	90.333	ENSCGRG00000007547	Mak16	100	90.333	Cricetulus_griseus_crigri
ENSMUSG00000031578	Mak16	100	68.317	ENSCSEG00000010069	mak16	100	69.967	Cynoglossus_semilaevis
ENSMUSG00000031578	Mak16	100	75.828	ENSCVAG00000017294	mak16	100	76.159	Cyprinodon_variegatus
ENSMUSG00000031578	Mak16	100	76.144	ENSDARG00000003527	mak16	100	78.125	Danio_rerio
ENSMUSG00000031578	Mak16	100	87.960	ENSDNOG00000008424	MAK16	100	88.629	Dasypus_novemcinctus
ENSMUSG00000031578	Mak16	98	89.153	ENSDORG00000015722	-	99	88.814	Dipodomys_ordii
ENSMUSG00000031578	Mak16	100	66.779	ENSDORG00000024387	-	100	64.527	Dipodomys_ordii
ENSMUSG00000031578	Mak16	84	48.252	FBgn0030067	Rbm13	56	63.212	Drosophila_melanogaster
ENSMUSG00000031578	Mak16	55	97.500	ENSETEG00000011643	-	71	97.500	Echinops_telfairi
ENSMUSG00000031578	Mak16	97	62.963	ENSEBUG00000011900	mak16	98	62.626	Eptatretus_burgeri
ENSMUSG00000031578	Mak16	100	89.262	ENSEASG00005016762	MAK16	100	89.262	Equus_asinus_asinus
ENSMUSG00000031578	Mak16	100	89.262	ENSECAG00000016532	MAK16	100	89.262	Equus_caballus
ENSMUSG00000031578	Mak16	100	85.050	ENSEEUG00000006280	MAK16	100	86.379	Erinaceus_europaeus
ENSMUSG00000031578	Mak16	100	76.221	ENSELUG00000008291	mak16	100	75.896	Esox_lucius
ENSMUSG00000031578	Mak16	100	89.262	ENSFCAG00000033972	MAK16	100	87.919	Felis_catus
ENSMUSG00000031578	Mak16	100	77.365	ENSFALG00000006827	MAK16	100	76.689	Ficedula_albicollis
ENSMUSG00000031578	Mak16	100	89.632	ENSFDAG00000012817	MAK16	100	89.967	Fukomys_damarensis
ENSMUSG00000031578	Mak16	100	74.098	ENSFHEG00000007084	mak16	100	75.082	Fundulus_heteroclitus
ENSMUSG00000031578	Mak16	98	75.593	ENSGMOG00000000511	mak16	99	75.593	Gadus_morhua
ENSMUSG00000031578	Mak16	100	79.392	ENSGALG00000001663	MAK16	100	78.041	Gallus_gallus
ENSMUSG00000031578	Mak16	100	71.192	ENSGAFG00000015800	mak16	100	71.192	Gambusia_affinis
ENSMUSG00000031578	Mak16	100	74.747	ENSGACG00000001081	mak16	99	76.174	Gasterosteus_aculeatus
ENSMUSG00000031578	Mak16	100	80.198	ENSGAGG00000022177	MAK16	100	78.878	Gopherus_agassizii
ENSMUSG00000031578	Mak16	100	87.667	ENSGGOG00000010487	MAK16	100	88.333	Gorilla_gorilla
ENSMUSG00000031578	Mak16	100	69.024	ENSHBUG00000006023	mak16	100	68.687	Haplochromis_burtoni
ENSMUSG00000031578	Mak16	99	89.899	ENSHGLG00000002981	MAK16	99	89.899	Heterocephalus_glaber_female
ENSMUSG00000031578	Mak16	99	89.899	ENSHGLG00100007722	MAK16	99	89.899	Heterocephalus_glaber_male
ENSMUSG00000031578	Mak16	100	62.136	ENSHCOG00000013162	mak16	99	62.951	Hippocampus_comes
ENSMUSG00000031578	Mak16	100	71.290	ENSIPUG00000005863	mak16	100	72.903	Ictalurus_punctatus
ENSMUSG00000031578	Mak16	100	87.584	ENSSTOG00000007812	MAK16	100	88.667	Ictidomys_tridecemlineatus
ENSMUSG00000031578	Mak16	93	82.971	ENSJJAG00000000383	-	100	81.884	Jaculus_jaculus
ENSMUSG00000031578	Mak16	100	77.778	ENSJJAG00000020605	-	100	76.768	Jaculus_jaculus
ENSMUSG00000031578	Mak16	100	88.889	ENSJJAG00000015237	-	100	87.879	Jaculus_jaculus
ENSMUSG00000031578	Mak16	100	72.222	ENSKMAG00000011338	mak16	100	72.222	Kryptolebias_marmoratus
ENSMUSG00000031578	Mak16	100	72.078	ENSLBEG00000026813	mak16	100	74.026	Labrus_bergylta
ENSMUSG00000031578	Mak16	100	77.377	ENSLACG00000018758	MAK16	100	77.705	Latimeria_chalumnae
ENSMUSG00000031578	Mak16	100	75.563	ENSLOCG00000015135	mak16	100	77.492	Lepisosteus_oculatus
ENSMUSG00000031578	Mak16	100	88.591	ENSLAFG00000026404	MAK16	100	88.591	Loxodonta_africana
ENSMUSG00000031578	Mak16	100	88.000	ENSMFAG00000031257	MAK16	100	88.667	Macaca_fascicularis
ENSMUSG00000031578	Mak16	100	88.000	ENSMMUG00000010244	MAK16	100	88.667	Macaca_mulatta
ENSMUSG00000031578	Mak16	100	88.000	ENSMNEG00000035461	MAK16	100	88.667	Macaca_nemestrina
ENSMUSG00000031578	Mak16	100	89.298	ENSMLEG00000028683	MAK16	100	88.963	Mandrillus_leucophaeus
ENSMUSG00000031578	Mak16	100	74.834	ENSMAMG00000018478	mak16	99	75.497	Mastacembelus_armatus
ENSMUSG00000031578	Mak16	100	75.163	ENSMZEG00005001916	mak16	100	76.471	Maylandia_zebra
ENSMUSG00000031578	Mak16	96	76.610	ENSMGAG00000001635	MAK16	96	75.170	Meleagris_gallopavo
ENSMUSG00000031578	Mak16	100	88.294	ENSMAUG00000008496	Mak16	100	90.301	Mesocricetus_auratus
ENSMUSG00000031578	Mak16	100	89.000	ENSMICG00000013106	MAK16	100	88.667	Microcebus_murinus
ENSMUSG00000031578	Mak16	100	87.000	ENSMOCG00000007445	Mak16	100	90.000	Microtus_ochrogaster
ENSMUSG00000031578	Mak16	90	63.806	ENSMMOG00000020734	mak16	99	63.806	Mola_mola
ENSMUSG00000031578	Mak16	99	75.839	ENSMODG00000011096	MAK16	98	76.792	Monodelphis_domestica
ENSMUSG00000031578	Mak16	98	68.106	ENSMALG00000003829	mak16	98	68.852	Monopterus_albus
ENSMUSG00000031578	Mak16	100	99.324	MGP_CAROLIEiJ_G0030957	Mak16	100	99.324	Mus_caroli
ENSMUSG00000031578	Mak16	100	96.959	MGP_PahariEiJ_G0021426	Mak16	100	96.959	Mus_pahari
ENSMUSG00000031578	Mak16	100	96.644	MGP_SPRETEiJ_G0032075	Mak16	100	96.644	Mus_spretus
ENSMUSG00000031578	Mak16	100	86.149	ENSMPUG00000010181	MAK16	100	87.205	Mustela_putorius_furo
ENSMUSG00000031578	Mak16	100	87.919	ENSMLUG00000002758	MAK16	100	88.926	Myotis_lucifugus
ENSMUSG00000031578	Mak16	100	88.255	ENSNGAG00000008772	Mak16	100	88.255	Nannospalax_galili
ENSMUSG00000031578	Mak16	100	87.333	ENSNLEG00000028118	MAK16	100	88.000	Nomascus_leucogenys
ENSMUSG00000031578	Mak16	99	82.034	ENSMEUG00000006945	MAK16	99	82.373	Notamacropus_eugenii
ENSMUSG00000031578	Mak16	99	73.267	ENSOPRG00000002116	MAK16	99	71.947	Ochotona_princeps
ENSMUSG00000031578	Mak16	100	75.000	ENSODEG00000000020	-	100	74.324	Octodon_degus
ENSMUSG00000031578	Mak16	100	69.595	ENSODEG00000002030	-	100	69.257	Octodon_degus
ENSMUSG00000031578	Mak16	100	88.176	ENSODEG00000005524	-	100	88.176	Octodon_degus
ENSMUSG00000031578	Mak16	100	76.316	ENSONIG00000000560	mak16	100	75.987	Oreochromis_niloticus
ENSMUSG00000031578	Mak16	81	87.552	ENSOANG00000002395	MAK16	93	83.529	Ornithorhynchus_anatinus
ENSMUSG00000031578	Mak16	100	88.255	ENSOCUG00000008735	MAK16	100	88.926	Oryctolagus_cuniculus
ENSMUSG00000031578	Mak16	99	71.906	ENSORLG00000019058	mak16	99	72.607	Oryzias_latipes
ENSMUSG00000031578	Mak16	99	72.241	ENSORLG00015007275	mak16	99	72.937	Oryzias_latipes_hsok
ENSMUSG00000031578	Mak16	99	72.757	ENSOMEG00000009317	mak16	99	70.724	Oryzias_melastigma
ENSMUSG00000031578	Mak16	99	73.810	ENSOGAG00000024416	MAK16	99	73.810	Otolemur_garnettii
ENSMUSG00000031578	Mak16	100	88.926	ENSOARG00000000384	MAK16	100	88.926	Ovis_aries
ENSMUSG00000031578	Mak16	100	87.333	ENSPPAG00000035102	MAK16	100	88.000	Pan_paniscus
ENSMUSG00000031578	Mak16	100	88.926	ENSPPRG00000002317	MAK16	100	87.584	Panthera_pardus
ENSMUSG00000031578	Mak16	100	88.926	ENSPTIG00000014223	MAK16	100	87.584	Panthera_tigris_altaica
ENSMUSG00000031578	Mak16	100	87.043	ENSPTRG00000020149	MAK16	100	87.708	Pan_troglodytes
ENSMUSG00000031578	Mak16	100	86.557	ENSPANG00000010420	MAK16	100	87.213	Papio_anubis
ENSMUSG00000031578	Mak16	100	74.110	ENSPKIG00000002082	mak16	100	75.081	Paramormyrops_kingsleyae
ENSMUSG00000031578	Mak16	98	76.144	ENSPSIG00000012396	MAK16	98	75.817	Pelodiscus_sinensis
ENSMUSG00000031578	Mak16	100	65.397	ENSPMGG00000004162	mak16	100	65.714	Periophthalmus_magnuspinnatus
ENSMUSG00000031578	Mak16	100	87.960	ENSPEMG00000015171	Mak16	100	89.967	Peromyscus_maniculatus_bairdii
ENSMUSG00000031578	Mak16	99	84.407	ENSPCIG00000028005	MAK16	99	84.407	Phascolarctos_cinereus
ENSMUSG00000031578	Mak16	100	71.523	ENSPFOG00000001068	mak16	100	72.185	Poecilia_formosa
ENSMUSG00000031578	Mak16	100	71.096	ENSPLAG00000022551	mak16	100	71.761	Poecilia_latipinna
ENSMUSG00000031578	Mak16	100	70.861	ENSPMEG00000006460	mak16	100	71.523	Poecilia_mexicana
ENSMUSG00000031578	Mak16	100	88.000	ENSPPYG00000018501	MAK16	100	88.667	Pongo_abelii
ENSMUSG00000031578	Mak16	100	71.477	ENSPCAG00000016090	MAK16	100	70.805	Procavia_capensis
ENSMUSG00000031578	Mak16	57	86.982	ENSPCOG00000018065	-	100	86.982	Propithecus_coquereli
ENSMUSG00000031578	Mak16	100	83.893	ENSPVAG00000004692	MAK16	100	83.893	Pteropus_vampyrus
ENSMUSG00000031578	Mak16	99	69.048	ENSPNAG00000014528	mak16	99	66.555	Pygocentrus_nattereri
ENSMUSG00000031578	Mak16	100	95.946	ENSRNOG00000010783	Mak16	100	95.946	Rattus_norvegicus
ENSMUSG00000031578	Mak16	100	88.333	ENSRBIG00000039940	MAK16	100	88.333	Rhinopithecus_bieti
ENSMUSG00000031578	Mak16	100	88.333	ENSRROG00000032196	MAK16	100	88.333	Rhinopithecus_roxellana
ENSMUSG00000031578	Mak16	59	57.627	YAL025C	-	96	47.297	Saccharomyces_cerevisiae
ENSMUSG00000031578	Mak16	100	89.000	ENSSBOG00000030325	MAK16	100	88.667	Saimiri_boliviensis_boliviensis
ENSMUSG00000031578	Mak16	100	82.000	ENSSHAG00000007593	MAK16	100	83.667	Sarcophilus_harrisii
ENSMUSG00000031578	Mak16	88	76.030	ENSSFOG00015019462	-	100	75.281	Scleropages_formosus
ENSMUSG00000031578	Mak16	100	75.987	ENSSFOG00015019447	mak16	100	75.329	Scleropages_formosus
ENSMUSG00000031578	Mak16	100	75.329	ENSSMAG00000018432	mak16	100	74.671	Scophthalmus_maximus
ENSMUSG00000031578	Mak16	100	74.110	ENSSDUG00000013093	mak16	99	74.757	Seriola_dumerili
ENSMUSG00000031578	Mak16	98	73.333	ENSSLDG00000002408	mak16	98	74.751	Seriola_lalandi_dorsalis
ENSMUSG00000031578	Mak16	80	84.388	ENSSARG00000009574	MAK16	100	84.810	Sorex_araneus
ENSMUSG00000031578	Mak16	100	81.419	ENSSPUG00000008956	MAK16	100	80.743	Sphenodon_punctatus
ENSMUSG00000031578	Mak16	100	75.000	ENSSPAG00000005102	mak16	99	74.671	Stegastes_partitus
ENSMUSG00000031578	Mak16	68	69.154	ENSSSCG00000032618	-	69	68.718	Sus_scrofa
ENSMUSG00000031578	Mak16	100	89.262	ENSSSCG00000036947	MAK16	100	88.255	Sus_scrofa
ENSMUSG00000031578	Mak16	99	66.553	ENSTGUG00000017303	MAK16	99	66.553	Taeniopygia_guttata
ENSMUSG00000031578	Mak16	100	76.431	ENSTRUG00000011544	mak16	99	77.441	Takifugu_rubripes
ENSMUSG00000031578	Mak16	100	65.878	ENSTBEG00000001861	MAK16	99	65.541	Tupaia_belangeri
ENSMUSG00000031578	Mak16	100	87.248	ENSTTRG00000013015	MAK16	100	86.577	Tursiops_truncatus
ENSMUSG00000031578	Mak16	100	87.248	ENSUAMG00000026894	MAK16	100	87.919	Ursus_americanus
ENSMUSG00000031578	Mak16	100	87.248	ENSUMAG00000021133	MAK16	100	87.919	Ursus_maritimus
ENSMUSG00000031578	Mak16	100	79.195	ENSVPAG00000006017	MAK16	100	77.852	Vicugna_pacos
ENSMUSG00000031578	Mak16	99	87.542	ENSVVUG00000019933	MAK16	99	86.532	Vulpes_vulpes
ENSMUSG00000031578	Mak16	100	76.744	ENSXETG00000016495	mak16	100	80.731	Xenopus_tropicalis
ENSMUSG00000031578	Mak16	98	63.333	ENSXCOG00000012528	mak16	96	63.333	Xiphophorus_couchianus
ENSMUSG00000031578	Mak16	100	71.192	ENSXMAG00000029335	mak16	100	71.192	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	-	IEA	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0030687	preribosome, large subunit precursor	21873635.	IBA	Component
GO:0043231	intracellular membrane-bounded organelle	-	ISO	Component