EuRBPDB

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  • Description
  • RBDs
  • RBPome
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000031590 (Gene tree)
Gene ID
14300
Gene Symbol
Frg1
Alias
-
Full Name
FSHD region gene 1
Gene Type
protein_coding
Species
Mus_musculus
Status
confidence
Strand
Minus strand
Length
19616 bases
Position
chr8:41397459-41417074
Accession
893597
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000033999FRG1PF06229.121.6e-7811
RNA binding proteome (RBPome)
PIDTitleMethod TimeAuthorDoi
27281784Identification of RNA binding Proteins in Macrophages by Interactome CaptureIC & RAW264.72016 Jun 8Liepelt ADOI: 10.1074/mcp.M115.056564
23912277The RNA binding protein repertoire of embryonic stem cellsIC & mESC2013 Aug 4Kwon SCDOI: 10.1038/nsmb.2638
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000033999-1039XM_017312570ENSMUSP00000033999258 (aa)XP_017168059P97376
ENSMUST00000210873-746--- (aa)--
Gene Model
Click here to download ENSMUSG00000031590's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000031590's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000031590Frg110097.287ENSG00000109536FRG110097.287Homo_sapiens
ENSMUSG00000031590Frg110072.481ENSAPOG00000001060frg110072.093Acanthochromis_polyacanthus
ENSMUSG00000031590Frg110097.674ENSAMEG00000013503FRG110097.674Ailuropoda_melanoleuca
ENSMUSG00000031590Frg18675.336ENSACIG00000022283frg110075.336Amphilophus_citrinellus
ENSMUSG00000031590Frg18673.991ENSAOCG00000024240frg18873.451Amphiprion_ocellaris
ENSMUSG00000031590Frg110071.705ENSAPEG00000002486frg110071.318Amphiprion_percula
ENSMUSG00000031590Frg110069.380ENSATEG00000010414frg110069.380Anabas_testudineus
ENSMUSG00000031590Frg110086.047ENSAPLG00000007785-10086.047Anas_platyrhynchos
ENSMUSG00000031590Frg110080.233ENSACAG00000006877-10079.070Anolis_carolinensis
ENSMUSG00000031590Frg110096.899ENSANAG00000020876FRG110096.899Aotus_nancymaae
ENSMUSG00000031590Frg110065.517ENSACLG00000027065frg110064.751Astatotilapia_calliptera
ENSMUSG00000031590Frg110071.705ENSAMXG00000032700frg110072.093Astyanax_mexicanus
ENSMUSG00000031590Frg110097.674ENSBTAG00000007089FRG110097.674Bos_taurus
ENSMUSG00000031590Frg19940.293WBGene00014177frg-19940.293Caenorhabditis_elegans
ENSMUSG00000031590Frg110096.899ENSCJAG00000011272FRG110096.899Callithrix_jacchus
ENSMUSG00000031590Frg110097.674ENSCAFG00000007135FRG110097.674Canis_familiaris
ENSMUSG00000031590Frg18397.653ENSCAFG00020000082-8597.653Canis_lupus_dingo
ENSMUSG00000031590Frg110097.674ENSCHIG00000011585-10097.674Capra_hircus
ENSMUSG00000031590Frg19868.504ENSTSYG00000031599-10068.898Carlito_syrichta
ENSMUSG00000031590Frg18896.491ENSCAPG00000016056-9297.333Cavia_aperea
ENSMUSG00000031590Frg110096.512ENSCPOG00000022277-10096.512Cavia_porcellus
ENSMUSG00000031590Frg110096.899ENSCCAG00000024627FRG110096.899Cebus_capucinus
ENSMUSG00000031590Frg110097.287ENSCATG00000029230FRG110097.287Cercocebus_atys
ENSMUSG00000031590Frg19964.706ENSCLAG00000009263-10065.490Chinchilla_lanigera
ENSMUSG00000031590Frg110081.783ENSCLAG00000004960-10081.783Chinchilla_lanigera
ENSMUSG00000031590Frg110065.504ENSCLAG00000006068-10065.116Chinchilla_lanigera
ENSMUSG00000031590Frg110096.512ENSCLAG00000000370-10096.512Chinchilla_lanigera
ENSMUSG00000031590Frg18490.278ENSCSAG00000017729-10090.278Chlorocebus_sabaeus
ENSMUSG00000031590Frg110097.287ENSCSAG00000002899FRG110097.287Chlorocebus_sabaeus
ENSMUSG00000031590Frg18787.111ENSCPBG00000009211-8887.168Chrysemys_picta_bellii
ENSMUSG00000031590Frg19952.239ENSCING00000005161-9952.239Ciona_intestinalis
ENSMUSG00000031590Frg15153.788ENSCSAVG00000008018-10047.826Ciona_savignyi
ENSMUSG00000031590Frg110097.287ENSCANG00000020991FRG110097.287Colobus_angolensis_palliatus
ENSMUSG00000031590Frg110098.837ENSCGRG00001014998Frg110098.837Cricetulus_griseus_chok1gshd
ENSMUSG00000031590Frg110079.070ENSCGRG00000003902-9678.682Cricetulus_griseus_crigri
ENSMUSG00000031590Frg110098.837ENSCGRG00000011860-10098.837Cricetulus_griseus_crigri
ENSMUSG00000031590Frg19665.587ENSCSEG00000015950frg110065.587Cynoglossus_semilaevis
ENSMUSG00000031590Frg110070.155ENSCVAG00000009985frg110070.930Cyprinodon_variegatus
ENSMUSG00000031590Frg110073.643ENSDARG00000056504frg19381.481Danio_rerio
ENSMUSG00000031590Frg110096.899ENSDNOG00000014886FRG110096.899Dasypus_novemcinctus
ENSMUSG00000031590Frg110084.884ENSDORG00000016190Frg110084.884Dipodomys_ordii
ENSMUSG00000031590Frg110047.744FBgn0036964FRG18151.163Drosophila_melanogaster
ENSMUSG00000031590Frg110095.736ENSETEG00000012349-10095.736Echinops_telfairi
ENSMUSG00000031590Frg15752.703ENSEBUG00000012359FRG18952.703Eptatretus_burgeri
ENSMUSG00000031590Frg110096.124ENSEASG00005017497FRG110096.124Equus_asinus_asinus
ENSMUSG00000031590Frg110096.124ENSECAG00000003122FRG110096.124Equus_caballus
ENSMUSG00000031590Frg16198.089ENSEEUG00000000145-10098.089Erinaceus_europaeus
ENSMUSG00000031590Frg110071.318ENSELUG00000021712frg110071.318Esox_lucius
ENSMUSG00000031590Frg110097.674ENSFCAG00000025737FRG110097.674Felis_catus
ENSMUSG00000031590Frg18686.099ENSFALG00000011231-8886.283Ficedula_albicollis
ENSMUSG00000031590Frg110096.124ENSFDAG00000000962-10096.124Fukomys_damarensis
ENSMUSG00000031590Frg110083.846ENSFDAG00000012697-10083.846Fukomys_damarensis
ENSMUSG00000031590Frg110069.380ENSFHEG00000010540frg110069.380Fundulus_heteroclitus
ENSMUSG00000031590Frg110068.992ENSGMOG00000000867frg110069.380Gadus_morhua
ENSMUSG00000031590Frg110084.884ENSGALG00000013590-10084.884Gallus_gallus
ENSMUSG00000031590Frg18169.524ENSGAFG00000013855frg110065.714Gambusia_affinis
ENSMUSG00000031590Frg110072.481ENSGACG00000016888frg110070.543Gasterosteus_aculeatus
ENSMUSG00000031590Frg110084.496ENSGAGG00000025012-10084.496Gopherus_agassizii
ENSMUSG00000031590Frg16983.708ENSGGOG00000012888-9083.708Gorilla_gorilla
ENSMUSG00000031590Frg110066.279ENSGGOG00000040796-10066.279Gorilla_gorilla
ENSMUSG00000031590Frg110069.767ENSHBUG00000010667frg110070.543Haplochromis_burtoni
ENSMUSG00000031590Frg110077.907ENSHGLG00000001211-10079.845Heterocephalus_glaber_female
ENSMUSG00000031590Frg110096.124ENSHGLG00000005601FRG110096.124Heterocephalus_glaber_female
ENSMUSG00000031590Frg19987.938ENSHGLG00000020943-9989.105Heterocephalus_glaber_female
ENSMUSG00000031590Frg19989.494ENSHGLG00000020402-9490.661Heterocephalus_glaber_female
ENSMUSG00000031590Frg110074.806ENSHGLG00100015285-10074.419Heterocephalus_glaber_male
ENSMUSG00000031590Frg110078.295ENSHGLG00100010674-10080.233Heterocephalus_glaber_male
ENSMUSG00000031590Frg19987.938ENSHGLG00100021211-9989.105Heterocephalus_glaber_male
ENSMUSG00000031590Frg110093.023ENSHGLG00100016261-10094.186Heterocephalus_glaber_male
ENSMUSG00000031590Frg18671.300ENSHCOG00000000224frg19571.300Hippocampus_comes
ENSMUSG00000031590Frg110075.969ENSIPUG00000022716frg110075.969Ictalurus_punctatus
ENSMUSG00000031590Frg110097.287ENSSTOG00000002857-10097.287Ictidomys_tridecemlineatus
ENSMUSG00000031590Frg110096.899ENSJJAG00000020625Frg110096.899Jaculus_jaculus
ENSMUSG00000031590Frg110068.605ENSKMAG00000005841frg110068.605Kryptolebias_marmoratus
ENSMUSG00000031590Frg110068.992ENSLBEG00000001466frg110069.380Labrus_bergylta
ENSMUSG00000031590Frg110072.137ENSLACG00000010243frg110072.137Latimeria_chalumnae
ENSMUSG00000031590Frg110074.806ENSLOCG00000013868frg110076.357Lepisosteus_oculatus
ENSMUSG00000031590Frg110096.124ENSLAFG00000011191FRG110096.124Loxodonta_africana
ENSMUSG00000031590Frg18386.047ENSMFAG00000042873-8986.047Macaca_fascicularis
ENSMUSG00000031590Frg110097.287ENSMFAG00000031178FRG110097.287Macaca_fascicularis
ENSMUSG00000031590Frg110097.287ENSMMUG00000001824FRG110097.287Macaca_mulatta
ENSMUSG00000031590Frg17885.784ENSMMUG00000047496-8885.784Macaca_mulatta
ENSMUSG00000031590Frg19690.688ENSMNEG00000018620FRG110090.688Macaca_nemestrina
ENSMUSG00000031590Frg110097.287ENSMLEG00000028881FRG110097.287Mandrillus_leucophaeus
ENSMUSG00000031590Frg110070.155ENSMAMG00000012406frg110070.930Mastacembelus_armatus
ENSMUSG00000031590Frg110069.380ENSMZEG00005007549frg110070.155Maylandia_zebra
ENSMUSG00000031590Frg110084.496ENSMGAG00000011481-10084.884Meleagris_gallopavo
ENSMUSG00000031590Frg110099.612ENSMAUG00000000847Frg110099.612Mesocricetus_auratus
ENSMUSG00000031590Frg110098.062ENSMICG00000046816FRG110098.062Microcebus_murinus
ENSMUSG00000031590Frg110091.860ENSMOCG00000023000Frg110091.860Microtus_ochrogaster
ENSMUSG00000031590Frg18671.749ENSMMOG00000004008frg19471.749Mola_mola
ENSMUSG00000031590Frg110090.698ENSMODG00000019031-8790.698Monodelphis_domestica
ENSMUSG00000031590Frg110069.767ENSMALG00000018497frg110070.155Monopterus_albus
ENSMUSG00000031590Frg1100100.000MGP_CAROLIEiJ_G0031006Frg1100100.000Mus_caroli
ENSMUSG00000031590Frg110099.612MGP_PahariEiJ_G0021475Frg110099.612Mus_pahari
ENSMUSG00000031590Frg110099.612MGP_SPRETEiJ_G0032120Frg110099.612Mus_spretus
ENSMUSG00000031590Frg110097.674ENSMPUG00000017962FRG110097.674Mustela_putorius_furo
ENSMUSG00000031590Frg110096.512ENSMLUG00000023179FRG110096.512Myotis_lucifugus
ENSMUSG00000031590Frg110098.062ENSNGAG00000016411Frg110098.062Nannospalax_galili
ENSMUSG00000031590Frg18167.619ENSNBRG00000006806frg19565.728Neolamprologus_brichardi
ENSMUSG00000031590Frg110096.512ENSNLEG00000000930FRG110096.512Nomascus_leucogenys
ENSMUSG00000031590Frg110069.767ENSNLEG00000032846-10090.179Nomascus_leucogenys
ENSMUSG00000031590Frg110082.061ENSNLEG00000035849-10083.588Nomascus_leucogenys
ENSMUSG00000031590Frg110080.000ENSNLEG00000032333-10080.000Nomascus_leucogenys
ENSMUSG00000031590Frg17886.634ENSNLEG00000036059-8686.634Nomascus_leucogenys
ENSMUSG00000031590Frg17884.653ENSNLEG00000028874-9184.653Nomascus_leucogenys
ENSMUSG00000031590Frg15992.105ENSMEUG00000007509-5992.105Notamacropus_eugenii
ENSMUSG00000031590Frg110081.783ENSOPRG00000004722-10081.783Ochotona_princeps
ENSMUSG00000031590Frg110072.093ENSODEG00000006953-10070.543Octodon_degus
ENSMUSG00000031590Frg110096.512ENSODEG00000006458-10096.512Octodon_degus
ENSMUSG00000031590Frg110069.884ENSONIG00000010162frg110070.270Oreochromis_niloticus
ENSMUSG00000031590Frg16691.228ENSOANG00000005659-7691.228Ornithorhynchus_anatinus
ENSMUSG00000031590Frg110096.899ENSOCUG00000009038-10096.899Oryctolagus_cuniculus
ENSMUSG00000031590Frg19668.826ENSORLG00000008106frg18968.826Oryzias_latipes
ENSMUSG00000031590Frg110069.380ENSORLG00020014355frg110069.380Oryzias_latipes_hni
ENSMUSG00000031590Frg110069.380ENSORLG00015014159frg110069.380Oryzias_latipes_hsok
ENSMUSG00000031590Frg18468.664ENSOMEG00000002468frg18868.664Oryzias_melastigma
ENSMUSG00000031590Frg110096.512ENSOGAG00000005749-10096.512Otolemur_garnettii
ENSMUSG00000031590Frg110095.019ENSOARG00000008592FRG110095.019Ovis_aries
ENSMUSG00000031590Frg19669.380ENSPPAG00000043174-10069.380Pan_paniscus
ENSMUSG00000031590Frg18495.370ENSPPAG00000043170-10095.370Pan_paniscus
ENSMUSG00000031590Frg110097.287ENSPPRG00000025003-10097.287Panthera_pardus
ENSMUSG00000031590Frg110093.023ENSPPRG00000019777-10094.186Panthera_pardus
ENSMUSG00000031590Frg110097.674ENSPTIG00000006588-10097.674Panthera_tigris_altaica
ENSMUSG00000031590Frg110093.411ENSPTIG00000006566-10094.574Panthera_tigris_altaica
ENSMUSG00000031590Frg19675.100ENSPTRG00000044710-10074.699Pan_troglodytes
ENSMUSG00000031590Frg19673.092ENSPTRG00000050204-10072.691Pan_troglodytes
ENSMUSG00000031590Frg110097.287ENSPTRG00000016671-10097.287Pan_troglodytes
ENSMUSG00000031590Frg19575.918ENSPTRG00000052363-9493.069Pan_troglodytes
ENSMUSG00000031590Frg18980.087ENSPTRG00000043123-9480.258Pan_troglodytes
ENSMUSG00000031590Frg110097.287ENSPTRG00000050205-10097.287Pan_troglodytes
ENSMUSG00000031590Frg17087.778ENSPANG00000031530-8487.778Papio_anubis
ENSMUSG00000031590Frg110067.829ENSPKIG00000024189frg110071.705Paramormyrops_kingsleyae
ENSMUSG00000031590Frg18487.037ENSPSIG00000017971-8287.037Pelodiscus_sinensis
ENSMUSG00000031590Frg19866.667ENSPMGG00000019273frg110066.667Periophthalmus_magnuspinnatus
ENSMUSG00000031590Frg110099.225ENSPEMG00000000650Frg110099.225Peromyscus_maniculatus_bairdii
ENSMUSG00000031590Frg110089.147ENSPCIG00000007530-6989.147Phascolarctos_cinereus
ENSMUSG00000031590Frg110070.270ENSPFOG00000006721frg110070.270Poecilia_formosa
ENSMUSG00000031590Frg110069.380ENSPMEG00000013816frg110067.442Poecilia_mexicana
ENSMUSG00000031590Frg110070.155ENSPREG00000000097frg110067.054Poecilia_reticulata
ENSMUSG00000031590Frg15693.793ENSPPYG00000029810-10093.793Pongo_abelii
ENSMUSG00000031590Frg16189.873ENSPPYG00000011275-8789.873Pongo_abelii
ENSMUSG00000031590Frg19591.463ENSPCAG00000014953-10091.463Procavia_capensis
ENSMUSG00000031590Frg110067.054ENSPCOG00000022726FRG110067.054Propithecus_coquereli
ENSMUSG00000031590Frg110082.171ENSPVAG00000010551FRG110082.171Pteropus_vampyrus
ENSMUSG00000031590Frg16673.099ENSPNYG00000015209frg17473.099Pundamilia_nyererei
ENSMUSG00000031590Frg110070.930ENSPNAG00000013259frg110070.155Pygocentrus_nattereri
ENSMUSG00000031590Frg110098.450ENSRNOG00000009846Frg110098.450Rattus_norvegicus
ENSMUSG00000031590Frg18796.000ENSRBIG00000042219-9496.000Rhinopithecus_bieti
ENSMUSG00000031590Frg18389.202ENSRROG00000032084-9487.500Rhinopithecus_roxellana
ENSMUSG00000031590Frg110094.186ENSRROG00000015523FRG110094.186Rhinopithecus_roxellana
ENSMUSG00000031590Frg110096.124ENSSBOG00000034175FRG110096.124Saimiri_boliviensis_boliviensis
ENSMUSG00000031590Frg110090.698ENSSHAG00000005886-10090.698Sarcophilus_harrisii
ENSMUSG00000031590Frg19771.600ENSSFOG00015021361frg19972.800Scleropages_formosus
ENSMUSG00000031590Frg110067.829ENSSMAG00000001213frg110068.217Scophthalmus_maximus
ENSMUSG00000031590Frg110069.380ENSSDUG00000018886frg110070.155Seriola_dumerili
ENSMUSG00000031590Frg110069.380ENSSLDG00000024191frg110069.380Seriola_lalandi_dorsalis
ENSMUSG00000031590Frg16694.737ENSSARG00000002471-9494.915Sorex_araneus
ENSMUSG00000031590Frg110077.907ENSSPUG00000017326-9682.381Sphenodon_punctatus
ENSMUSG00000031590Frg110067.054ENSSPAG00000013294frg110066.667Stegastes_partitus
ENSMUSG00000031590Frg110096.899ENSSSCG00000006996FRG110096.899Sus_scrofa
ENSMUSG00000031590Frg110083.721ENSTGUG00000007028-10083.721Taeniopygia_guttata
ENSMUSG00000031590Frg110070.155ENSTRUG00000016208frg110070.155Takifugu_rubripes
ENSMUSG00000031590Frg110068.605ENSTNIG00000007128frg110069.380Tetraodon_nigroviridis
ENSMUSG00000031590Frg18367.606ENSTBEG00000012789-10067.606Tupaia_belangeri
ENSMUSG00000031590Frg110096.124ENSTBEG00000014491-10096.124Tupaia_belangeri
ENSMUSG00000031590Frg17760.804ENSTBEG00000017605-9960.804Tupaia_belangeri
ENSMUSG00000031590Frg110096.899ENSTTRG00000003429FRG110096.899Tursiops_truncatus
ENSMUSG00000031590Frg19688.664ENSUAMG00000012123-10088.259Ursus_americanus
ENSMUSG00000031590Frg110097.674ENSUMAG00000021119FRG110097.674Ursus_maritimus
ENSMUSG00000031590Frg110094.574ENSVPAG00000000616FRG110094.574Vicugna_pacos
ENSMUSG00000031590Frg19296.624ENSVPAG00000011977-10096.624Vicugna_pacos
ENSMUSG00000031590Frg18397.653ENSVVUG00000007181-7797.653Vulpes_vulpes
ENSMUSG00000031590Frg110079.070ENSXETG00000012470frg110078.682Xenopus_tropicalis
ENSMUSG00000031590Frg110064.341ENSXCOG00000005312frg110064.341Xiphophorus_couchianus
ENSMUSG00000031590Frg110066.667ENSXMAG00000007751frg110066.667Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003723RNA binding-IEAFunction
GO:0003779actin binding-IEAFunction
GO:0005634nucleus-IEAComponent
GO:0005681spliceosomal complex-IEAComponent
GO:0005730nucleolus21873635.IBAComponent
GO:0005737cytoplasm-IEAComponent
GO:0006364rRNA processing-IEAProcess
GO:0006397mRNA processing-IEAProcess
GO:0007517muscle organ development-IEAProcess
GO:0008380RNA splicing-IEAProcess
GO:0042254ribosome biogenesis-IEAProcess
GO:0051015actin filament binding21873635.IBAFunction
GO:0055120striated muscle dense body21873635.IBAComponent
GO:0071013catalytic step 2 spliceosome21873635.IBAComponent
GO:0071013catalytic step 2 spliceosome-ISOComponent

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