EuRBPDB

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  • Description
  • RBDs
  • Expression
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSMUSG00000031665 (Gene tree)
Gene ID
58198
Gene Symbol
Sall1
Alias
Msal-3
Full Name
spalt like transcription factor 1
Gene Type
protein_coding
Species
Mus_musculus
Status
putative
Strand
Minus strand
Length
16928 bases
Position
chr8:89027235-89044162
Accession
1889585
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMUSP00000034090zf-C2H2PF00096.261e-3316
ENSMUSP00000034090zf-C2H2PF00096.261e-3326
ENSMUSP00000034090zf-C2H2PF00096.261e-3336
ENSMUSP00000034090zf-C2H2PF00096.261e-3346
ENSMUSP00000034090zf-C2H2PF00096.261e-3356
ENSMUSP00000034090zf-C2H2PF00096.261e-3366
ENSMUSP00000034090zf-metPF12874.72.1e-2415
ENSMUSP00000034090zf-metPF12874.72.1e-2425
ENSMUSP00000034090zf-metPF12874.72.1e-2435
ENSMUSP00000034090zf-metPF12874.72.1e-2445
ENSMUSP00000034090zf-metPF12874.72.1e-2455
Expression
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMUST00000034090-5265XM_006531238ENSMUSP000000340901323 (aa)XP_006531301Q6P5E3
Gene Model
Click here to download ENSMUSG00000031665's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000031665's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMUSG00000031665Sall19965.306ENSMUSG00000024565Sall39965.306
ENSMUSG00000031665Sall19564.706ENSMUSG00000027547Sall410064.706
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMUSG00000031665Sall110090.189ENSG00000103449SALL110090.391Homo_sapiens
ENSMUSG00000031665Sall110067.457ENSAPOG00000022764sall1a9967.212Acanthochromis_polyacanthus
ENSMUSG00000031665Sall110088.746ENSAMEG00000006817SALL110088.973Ailuropoda_melanoleuca
ENSMUSG00000031665Sall110066.420ENSACIG00000004231sall1a9965.999Amphilophus_citrinellus
ENSMUSG00000031665Sall110067.457ENSAOCG00000002800sall1a9967.037Amphiprion_ocellaris
ENSMUSG00000031665Sall110067.457ENSAPEG00000010179sall1a9967.037Amphiprion_percula
ENSMUSG00000031665Sall110066.864ENSATEG00000003006sall1a10066.560Anabas_testudineus
ENSMUSG00000031665Sall110082.464ENSAPLG00000003356SALL19983.144Anas_platyrhynchos
ENSMUSG00000031665Sall19979.452ENSACAG00000014399SALL19679.360Anolis_carolinensis
ENSMUSG00000031665Sall110090.566ENSANAG00000027238SALL110090.566Aotus_nancymaae
ENSMUSG00000031665Sall110066.444ENSACLG00000017148sall1a9965.924Astatotilapia_calliptera
ENSMUSG00000031665Sall110067.456ENSAMXG00000018599sall1a9967.090Astyanax_mexicanus
ENSMUSG00000031665Sall19950.774ENSAMXG00000017702sall1b9950.920Astyanax_mexicanus
ENSMUSG00000031665Sall110088.604ENSBTAG00000008544SALL110088.839Bos_taurus
ENSMUSG00000031665Sall110090.415ENSCJAG00000001740SALL110090.415Callithrix_jacchus
ENSMUSG00000031665Sall110089.593ENSCAFG00000009755SALL110089.819Canis_familiaris
ENSMUSG00000031665Sall110089.593ENSCAFG00020002842SALL110089.819Canis_lupus_dingo
ENSMUSG00000031665Sall110088.160ENSCHIG00000026074SALL110088.320Capra_hircus
ENSMUSG00000031665Sall110090.717ENSTSYG00000029464SALL110090.559Carlito_syrichta
ENSMUSG00000031665Sall19890.986ENSCPOG00000006564SALL110090.755Cavia_porcellus
ENSMUSG00000031665Sall110087.547ENSCCAG00000001639SALL110087.472Cebus_capucinus
ENSMUSG00000031665Sall110090.340ENSCATG00000004982SALL110090.491Cercocebus_atys
ENSMUSG00000031665Sall110090.710ENSCLAG00000006380SALL110090.710Chinchilla_lanigera
ENSMUSG00000031665Sall110089.434ENSCSAG00000005319SALL110089.434Chlorocebus_sabaeus
ENSMUSG00000031665Sall16494.466ENSCHOG00000000800-6994.466Choloepus_hoffmanni
ENSMUSG00000031665Sall110083.006ENSCPBG00000015924SALL19984.013Chrysemys_picta_bellii
ENSMUSG00000031665Sall110090.189ENSCANG00000036664SALL110090.635Colobus_angolensis_palliatus
ENSMUSG00000031665Sall110093.651ENSCGRG00001023314-10093.273Cricetulus_griseus_chok1gshd
ENSMUSG00000031665Sall19893.524ENSCGRG00000009496Sall110093.138Cricetulus_griseus_crigri
ENSMUSG00000031665Sall110065.285ENSCSEG00000009349sall1a10065.877Cynoglossus_semilaevis
ENSMUSG00000031665Sall19065.943ENSCVAG00000020513sall1a9965.221Cyprinodon_variegatus
ENSMUSG00000031665Sall19946.508ENSDARG00000075891sall1b9946.360Danio_rerio
ENSMUSG00000031665Sall110067.411ENSDARG00000074319sall1a10067.161Danio_rerio
ENSMUSG00000031665Sall110087.934ENSDNOG00000016413SALL110088.235Dasypus_novemcinctus
ENSMUSG00000031665Sall19887.750ENSETEG00000015150SALL110087.904Echinops_telfairi
ENSMUSG00000031665Sall19946.508ENSEBUG00000011732SALL19765.385Eptatretus_burgeri
ENSMUSG00000031665Sall16942.466ENSEBUG00000008798SALL16843.860Eptatretus_burgeri
ENSMUSG00000031665Sall110089.955ENSEASG00005014602SALL110089.955Equus_asinus_asinus
ENSMUSG00000031665Sall19187.583ENSECAG00000011334SALL19987.583Equus_caballus
ENSMUSG00000031665Sall19888.285ENSEEUG00000002014SALL110088.402Erinaceus_europaeus
ENSMUSG00000031665Sall19951.075ENSELUG00000017774-9950.391Esox_lucius
ENSMUSG00000031665Sall110064.493ENSELUG00000006159sall1a10064.493Esox_lucius
ENSMUSG00000031665Sall110088.320ENSFCAG00000024654SALL110088.780Felis_catus
ENSMUSG00000031665Sall110081.949ENSFALG00000000074SALL19982.313Ficedula_albicollis
ENSMUSG00000031665Sall17563.462ENSFHEG00000008424-9961.538Fundulus_heteroclitus
ENSMUSG00000031665Sall110066.518ENSFHEG00000012579sall1a9965.924Fundulus_heteroclitus
ENSMUSG00000031665Sall19741.624ENSGMOG00000013383-9941.879Gadus_morhua
ENSMUSG00000031665Sall110064.853ENSGMOG00000006103sall1a9964.933Gadus_morhua
ENSMUSG00000031665Sall110082.402ENSGALG00000039238SALL19982.766Gallus_gallus
ENSMUSG00000031665Sall110066.691ENSGAFG00000009964sall1a9966.568Gambusia_affinis
ENSMUSG00000031665Sall110065.850ENSGACG00000016702sall1a10065.530Gasterosteus_aculeatus
ENSMUSG00000031665Sall110082.628ENSGAGG00000013979SALL19983.605Gopherus_agassizii
ENSMUSG00000031665Sall110090.340ENSGGOG00000000663SALL110090.340Gorilla_gorilla
ENSMUSG00000031665Sall110066.444ENSHBUG00000022005sall1a9965.924Haplochromis_burtoni
ENSMUSG00000031665Sall110091.012ENSHGLG00000004288-10091.012Heterocephalus_glaber_female
ENSMUSG00000031665Sall110091.012ENSHGLG00100017496SALL110091.012Heterocephalus_glaber_male
ENSMUSG00000031665Sall110065.336ENSHCOG00000000974sall1a9965.697Hippocampus_comes
ENSMUSG00000031665Sall19967.761ENSIPUG00000016265SALL19966.891Ictalurus_punctatus
ENSMUSG00000031665Sall19949.553ENSIPUG00000022928sall1b9949.255Ictalurus_punctatus
ENSMUSG00000031665Sall110090.875ENSSTOG00000020885SALL110090.271Ictidomys_tridecemlineatus
ENSMUSG00000031665Sall110066.420ENSKMAG00000016681sall1a9965.975Kryptolebias_marmoratus
ENSMUSG00000031665Sall19766.055ENSLBEG00000012207sall1a9565.673Labrus_bergylta
ENSMUSG00000031665Sall19739.426ENSLACG00000014018-9339.936Latimeria_chalumnae
ENSMUSG00000031665Sall110076.133ENSLACG00000003556SALL19976.417Latimeria_chalumnae
ENSMUSG00000031665Sall110071.503ENSLOCG00000007283sall1b9971.471Lepisosteus_oculatus
ENSMUSG00000031665Sall19888.376ENSLAFG00000015251SALL110087.914Loxodonta_africana
ENSMUSG00000031665Sall110090.491ENSMFAG00000003298SALL110090.491Macaca_fascicularis
ENSMUSG00000031665Sall19390.717ENSMMUG00000017200SALL110090.717Macaca_mulatta
ENSMUSG00000031665Sall19390.635ENSMNEG00000034770SALL110090.635Macaca_nemestrina
ENSMUSG00000031665Sall110090.264ENSMLEG00000036406SALL110090.635Mandrillus_leucophaeus
ENSMUSG00000031665Sall110067.208ENSMAMG00000004164sall1a10066.863Mastacembelus_armatus
ENSMUSG00000031665Sall110066.444ENSMZEG00005006479sall1a9965.924Maylandia_zebra
ENSMUSG00000031665Sall19882.525ENSMGAG00000004704SALL19982.897Meleagris_gallopavo
ENSMUSG00000031665Sall110092.372ENSMAUG00000019093Sall110092.221Mesocricetus_auratus
ENSMUSG00000031665Sall110089.199ENSMICG00000036486SALL110089.199Microcebus_murinus
ENSMUSG00000031665Sall110066.098ENSMMOG00000016400sall1a10065.852Mola_mola
ENSMUSG00000031665Sall110085.801ENSMODG00000013114SALL110085.498Monodelphis_domestica
ENSMUSG00000031665Sall110066.839ENSMALG00000013400sall1a10066.667Monopterus_albus
ENSMUSG00000031665Sall110099.019MGP_CAROLIEiJ_G0031362Sall110099.019Mus_caroli
ENSMUSG00000031665Sall110097.659MGP_PahariEiJ_G0022961Sall110097.659Mus_pahari
ENSMUSG00000031665Sall110099.698MGP_SPRETEiJ_G0032480Sall110099.698Mus_spretus
ENSMUSG00000031665Sall19887.327ENSMPUG00000003265SALL19786.996Mustela_putorius_furo
ENSMUSG00000031665Sall19882.811ENSMLUG00000015541SALL110082.811Myotis_lucifugus
ENSMUSG00000031665Sall110066.692ENSNBRG00000009307sall1a9966.170Neolamprologus_brichardi
ENSMUSG00000031665Sall19497.222ENSNLEG00000001008SALL110097.222Nomascus_leucogenys
ENSMUSG00000031665Sall110085.423ENSMEUG00000012206SALL110084.970Notamacropus_eugenii
ENSMUSG00000031665Sall17693.567ENSOPRG00000005645SALL17493.431Ochotona_princeps
ENSMUSG00000031665Sall110090.861ENSODEG00000003685SALL110090.861Octodon_degus
ENSMUSG00000031665Sall110066.916ENSONIG00000002831sall1a9966.393Oreochromis_niloticus
ENSMUSG00000031665Sall18988.302ENSOANG00000013399SALL19985.776Ornithorhynchus_anatinus
ENSMUSG00000031665Sall110066.395ENSORLG00000013827sall1a10066.320Oryzias_latipes
ENSMUSG00000031665Sall110066.321ENSORLG00020020570sall1a10066.245Oryzias_latipes_hni
ENSMUSG00000031665Sall110066.543ENSORLG00015018830sall1a10066.346Oryzias_latipes_hsok
ENSMUSG00000031665Sall110066.469ENSOMEG00000016043sall1a9966.420Oryzias_melastigma
ENSMUSG00000031665Sall110089.199ENSOGAG00000027316SALL110089.350Otolemur_garnettii
ENSMUSG00000031665Sall110082.896ENSOARG00000017583SALL110083.058Ovis_aries
ENSMUSG00000031665Sall19867.846ENSPPAG00000035136-9968.356Pan_paniscus
ENSMUSG00000031665Sall19989.329ENSPPAG00000035657SALL110089.992Pan_paniscus
ENSMUSG00000031665Sall110088.395ENSPPRG00000023283SALL110088.862Panthera_pardus
ENSMUSG00000031665Sall18495.429ENSPTIG00000013539-9695.429Panthera_tigris_altaica
ENSMUSG00000031665Sall19668.293ENSPTRG00000045256-9868.863Pan_troglodytes
ENSMUSG00000031665Sall110089.977ENSPTRG00000008108SALL110089.715Pan_troglodytes
ENSMUSG00000031665Sall110090.340ENSPANG00000024176SALL110090.491Papio_anubis
ENSMUSG00000031665Sall110065.169ENSPKIG00000005383-10065.015Paramormyrops_kingsleyae
ENSMUSG00000031665Sall110065.247ENSPKIG00000022251sall1a9964.772Paramormyrops_kingsleyae
ENSMUSG00000031665Sall110082.704ENSPSIG00000008582SALL19982.993Pelodiscus_sinensis
ENSMUSG00000031665Sall110064.469ENSPMGG00000021788sall1a10064.684Periophthalmus_magnuspinnatus
ENSMUSG00000031665Sall19951.282ENSPMAG00000008148sall1b9951.387Petromyzon_marinus
ENSMUSG00000031665Sall110085.574ENSPCIG00000017840SALL110085.121Phascolarctos_cinereus
ENSMUSG00000031665Sall19866.515ENSPFOG00000015799sall1a9666.340Poecilia_formosa
ENSMUSG00000031665Sall110066.642ENSPLAG00000022539sall1a9966.469Poecilia_latipinna
ENSMUSG00000031665Sall110066.790ENSPMEG00000020894sall1a9966.494Poecilia_mexicana
ENSMUSG00000031665Sall110066.642ENSPREG00000006802sall1a10066.296Poecilia_reticulata
ENSMUSG00000031665Sall19089.576ENSPPYG00000007345SALL19689.576Pongo_abelii
ENSMUSG00000031665Sall18493.827ENSPCAG00000008162SALL19393.827Procavia_capensis
ENSMUSG00000031665Sall110089.057ENSPCOG00000028192SALL110089.283Propithecus_coquereli
ENSMUSG00000031665Sall16789.603ENSPVAG00000015374SALL110090.771Pteropus_vampyrus
ENSMUSG00000031665Sall110066.518ENSPNYG00000010865sall1a9965.999Pundamilia_nyererei
ENSMUSG00000031665Sall19863.462ENSPNAG00000028248-9965.306Pygocentrus_nattereri
ENSMUSG00000031665Sall110065.752ENSPNAG00000023644sall1a9965.370Pygocentrus_nattereri
ENSMUSG00000031665Sall19953.299ENSPNAG00000007442sall1b9952.859Pygocentrus_nattereri
ENSMUSG00000031665Sall110094.792ENSRNOG00000013907Sall110094.943Rattus_norvegicus
ENSMUSG00000031665Sall19390.798ENSRBIG00000015707SALL110090.798Rhinopithecus_bieti
ENSMUSG00000031665Sall19989.787ENSRROG00000035777SALL110090.879Rhinopithecus_roxellana
ENSMUSG00000031665Sall110090.642ENSSBOG00000032186SALL110090.642Saimiri_boliviensis_boliviensis
ENSMUSG00000031665Sall110084.807ENSSHAG00000009477SALL110084.743Sarcophilus_harrisii
ENSMUSG00000031665Sall19865.807ENSSFOG00015001590sall1a9966.107Scleropages_formosus
ENSMUSG00000031665Sall19965.553ENSSFOG00015020020sall1a9965.479Scleropages_formosus
ENSMUSG00000031665Sall110066.766ENSSMAG00000009160sall1a10066.642Scophthalmus_maximus
ENSMUSG00000031665Sall17659.184ENSSDUG00000000748sall1b9959.184Seriola_dumerili
ENSMUSG00000031665Sall110067.235ENSSDUG00000006507sall1a10066.741Seriola_dumerili
ENSMUSG00000031665Sall110067.309ENSSLDG00000017721sall1a10066.815Seriola_lalandi_dorsalis
ENSMUSG00000031665Sall19888.863ENSSARG00000000661SALL110089.025Sorex_araneus
ENSMUSG00000031665Sall110082.628ENSSPUG00000000156SALL19982.918Sphenodon_punctatus
ENSMUSG00000031665Sall110067.234ENSSPAG00000021615sall1a9966.913Stegastes_partitus
ENSMUSG00000031665Sall110088.621ENSSSCG00000002836SALL110088.470Sus_scrofa
ENSMUSG00000031665Sall110082.251ENSTGUG00000007514SALL19982.615Taeniopygia_guttata
ENSMUSG00000031665Sall19164.677ENSTRUG00000008950sall1a10064.806Takifugu_rubripes
ENSMUSG00000031665Sall19263.932ENSTNIG00000004257sall1a10064.059Tetraodon_nigroviridis
ENSMUSG00000031665Sall173100.000ENSTBEG00000002119-55100.000Tupaia_belangeri
ENSMUSG00000031665Sall19088.380ENSUAMG00000023379-9288.550Ursus_americanus
ENSMUSG00000031665Sall19088.504ENSVVUG00000019383-9988.673Vulpes_vulpes
ENSMUSG00000031665Sall17661.538ENSXETG00000017176sall26061.538Xenopus_tropicalis
ENSMUSG00000031665Sall110073.324ENSXETG00000018417sall19973.378Xenopus_tropicalis
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0000122negative regulation of transcription by RNA polymerase II11836251.16707490.19168674.IDAProcess
GO:0000122negative regulation of transcription by RNA polymerase II19168674.IGIProcess
GO:0000122negative regulation of transcription by RNA polymerase II18470945.IMPProcess
GO:0000122negative regulation of transcription by RNA polymerase II-ISOProcess
GO:0000792heterochromatin17295837.IDAComponent
GO:0000792heterochromatin-ISOComponent
GO:0000978RNA polymerase II proximal promoter sequence-specific DNA binding19168674.IDAFunction
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific21062744.IDAFunction
GO:0001085RNA polymerase II transcription factor binding21062744.IPIFunction
GO:0001158enhancer sequence-specific DNA binding21062744.IDAFunction
GO:0001227DNA-binding transcription repressor activity, RNA polymerase II-specific19168674.IDAFunction
GO:0001657ureteric bud development11688560.IMPProcess
GO:0001658branching involved in ureteric bud morphogenesis12482961.IMPProcess
GO:0001822kidney development-ISOProcess
GO:0001843neural tube closure16790473.IGIProcess
GO:0003281ventricular septum development16790473.IGIProcess
GO:0003281ventricular septum development18470945.IMPProcess
GO:0003337mesenchymal to epithelial transition involved in metanephros morphogenesis11688560.IMPProcess
GO:0003340negative regulation of mesenchymal to epithelial transition involved in metanephros morphogenesis24550112.IMPProcess
GO:0003676nucleic acid binding-IEAFunction
GO:0003677DNA binding19168674.IDAFunction
GO:0003682chromatin binding20439720.IDAFunction
GO:0005515protein binding11836251.IPIFunction
GO:0005634nucleus21873635.IBAComponent
GO:0005634nucleus21062744.ICComponent
GO:0005634nucleus11688560.11836251.18260139.IDAComponent
GO:0005634nucleus-ISOComponent
GO:0005737cytoplasm-ISOComponent
GO:0006355regulation of transcription, DNA-templated21873635.IBAProcess
GO:0007507heart development-ISOProcess
GO:0008013beta-catenin binding-ISOFunction
GO:0010369chromocenter-ISOComponent
GO:0016581NuRD complex11836251.IDAComponent
GO:0021553olfactory nerve development18024993.IMPProcess
GO:0021772olfactory bulb development18024993.IMPProcess
GO:0021889olfactory bulb interneuron differentiation18024993.IMPProcess
GO:0021915neural tube development18818376.IGIProcess
GO:0030177positive regulation of Wnt signaling pathway-ISOProcess
GO:0031129inductive cell-cell signaling11688560.IMPProcess
GO:0035136forelimb morphogenesis19168674.IGIProcess
GO:0035137hindlimb morphogenesis19168674.IGIProcess
GO:0042473outer ear morphogenesis-ISOProcess
GO:0042733embryonic digit morphogenesis18470945.IMPProcess
GO:0042733embryonic digit morphogenesis-ISOProcess
GO:0044877protein-containing complex binding16707490.IPIFunction
GO:0045666positive regulation of neuron differentiation18024993.IMPProcess
GO:0045879negative regulation of smoothened signaling pathway19168674.IGIProcess
GO:0045892negative regulation of transcription, DNA-templated16707490.IDAProcess
GO:0045892negative regulation of transcription, DNA-templated18470945.IMPProcess
GO:0045892negative regulation of transcription, DNA-templated-ISOProcess
GO:0045893positive regulation of transcription, DNA-templated-ISOProcess
GO:0045944positive regulation of transcription by RNA polymerase II20439720.IDAProcess
GO:0045944positive regulation of transcription by RNA polymerase II20439720.IMPProcess
GO:0045944positive regulation of transcription by RNA polymerase II-ISOProcess
GO:0046872metal ion binding-IEAFunction
GO:0048566embryonic digestive tract development-ISOProcess
GO:0060173limb development-ISOProcess
GO:0061034olfactory bulb mitral cell layer development-ISOProcess
GO:0072073kidney epithelium development16839447.IMPProcess
GO:0072092ureteric bud invasion11688560.16839447.IMPProcess
GO:0072309mesenchymal stem cell maintenance involved in metanephric nephron morphogenesis24550112.IMPProcess
GO:0090190positive regulation of branching involved in ureteric bud morphogenesis24550112.IMPProcess
GO:2000177regulation of neural precursor cell proliferation18024993.IMPProcess
GO:2000381negative regulation of mesoderm development21062744.IMPProcess
GO:2000384negative regulation of ectoderm development21062744.IMPProcess

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