EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000031816 (Gene tree)
Gene ID: 234814
Gene Symbol: Mthfsd
Alias: -
Full Name: methenyltetrahydrofolate synthetase domain containing
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 16765
Position: chr8: 121091628-121108392
Accession: 2679252
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000128503	-	358	-	-	- (aa)	-	-
ENSMUST00000133058	-	520	-	-	- (aa)	-	-
ENSMUST00000151576	-	488	-	ENSMUSP00000148598	86 (aa)	-	A0A1D5RM24
ENSMUST00000138908	-	557	-	-	- (aa)	-	-
ENSMUST00000149718	-	3347	-	-	- (aa)	-	-
ENSMUST00000145991	-	559	-	-	- (aa)	-	-
ENSMUST00000156606	-	736	-	-	- (aa)	-	-
ENSMUST00000140260	-	673	-	-	- (aa)	-	-
ENSMUST00000128052	-	2415	-	ENSMUSP00000148803	44 (aa)	-	A0A1D5RMJ5
ENSMUST00000126431	-	913	XM_006530935	ENSMUSP00000119673	279 (aa)	XP_006530998	D3Z1R2
ENSMUST00000116415	-	1520	-	ENSMUSP00000112116	372 (aa)	-	Q3URQ7
ENSMUST00000213028	-	740	-	-	- (aa)	-	-
ENSMUST00000133037	-	1060	XM_006530938	ENSMUSP00000117429	319 (aa)	XP_006531001	D3Z4L1
ENSMUST00000047282	-	8312	XM_006530941	ENSMUSP00000044172	353 (aa)	XP_006531004	Q3URQ7
ENSMUST00000134758	-	1149	-	ENSMUSP00000148797	67 (aa)	-	A0A1D5RMI9
ENSMUST00000139782	-	1366	XM_006530937	ENSMUSP00000115382	300 (aa)	XP_006531000	D3Z0Q4

Gene Model

Click here to download ENSMUSG00000031816's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000031816's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000031816	Mthfsd	87	30.270	FBgn0263594	lost	68	30.270	Drosophila_melanogaster

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0005737	cytoplasm	21873635.	IBA	Component