EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000031818 (Gene tree)
Gene ID: 12857
Gene Symbol: Cox4i1
Alias: COXIV|Cox4|Cox4a
Full Name: cytochrome c oxidase subunit 4I1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 5986
Position: chr8: 120668222-120674207
Accession: 88473
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000180856	-	608	-	-	- (aa)	-	-
ENSMUST00000181172	-	578	-	-	- (aa)	-	-
ENSMUST00000181795	-	476	-	ENSMUSP00000138063	92 (aa)	-	M0QWX7
ENSMUST00000181847	-	611	-	ENSMUSP00000138053	65 (aa)	-	M0QWX2
ENSMUST00000181026	-	438	-	-	- (aa)	-	-
ENSMUST00000181586	-	765	-	ENSMUSP00000138019	169 (aa)	-	P19783
ENSMUST00000034276	-	745	-	ENSMUSP00000034276	169 (aa)	-	P19783

Gene Model

Click here to download ENSMUSG00000031818's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu00190	Oxidative phosphorylation	KEGG
mmu01100	Metabolic pathways	KEGG
mmu04260	Cardiac muscle contraction	KEGG
mmu04714	Thermogenesis	KEGG
mmu04932	Non-alcoholic fatty liver disease (NAFLD)	KEGG
mmu05010	Alzheimer disease	KEGG
mmu05012	Parkinson disease	KEGG
mmu05016	Huntington disease	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000031818's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000031818	Cox4i1	92	35.294	FBgn0032833	COX4	72	37.879	Drosophila_melanogaster

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0004129	cytochrome-c oxidase activity	21873635.	IBA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005739	mitochondrion	14651853.18614015.	HDA	Component
GO:0005739	mitochondrion	11940593.16103131.22555453.22783020.26767982.	IDA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0005743	mitochondrial inner membrane	12865426.	HDA	Component
GO:0005743	mitochondrial inner membrane	12910269.	IDA	Component
GO:0005751	mitochondrial respiratory chain complex IV	21873635.	IBA	Component
GO:0005751	mitochondrial respiratory chain complex IV	-	ISO	Component
GO:0006123	mitochondrial electron transport, cytochrome c to oxygen	21873635.	IBA	Process
GO:0016020	membrane	-	IEA	Component
GO:0031966	mitochondrial membrane	17923681.	IDA	Component