EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000031826 (Gene tree)
Gene ID: 22224
Gene Symbol: Usp10
Alias: 2610014N07Rik|Uchrp
Full Name: ubiquitin specific peptidase 10
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 47201 bases
Position: chr8:119910360-119957560
Accession: 894652
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000104616	PAM2	PF07145.15	0.00035	1	1
ENSMUSP00000123590	PAM2	PF07145.15	0.00035	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000142432	-	665	-	-	- (aa)	-	-
ENSMUST00000137310	-	831	-	-	- (aa)	-	-
ENSMUST00000139648	-	459	-	-	- (aa)	-	-
ENSMUST00000108982	-	559	-	ENSMUSP00000104610	114 (aa)	-	G3X9U6
ENSMUST00000212612	-	761	-	-	- (aa)	-	-
ENSMUST00000134729	-	424	-	ENSMUSP00000134182	88 (aa)	-	G3UYQ8
ENSMUST00000135210	-	467	-	-	- (aa)	-	-
ENSMUST00000108988	-	3274	XM_006530846	ENSMUSP00000104616	792 (aa)	XP_006530909	P52479
ENSMUST00000125066	-	747	-	-	- (aa)	-	-
ENSMUST00000211935	-	3723	-	-	- (aa)	-	-
ENSMUST00000144458	-	3726	XM_006530845	ENSMUSP00000123590	793 (aa)	XP_006530908	P52479
ENSMUST00000148767	-	717	-	-	- (aa)	-	-
ENSMUST00000143615	-	2129	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000031826's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000031826's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000031826	Usp10	99	80.580	ENSAMEG00000018303	USP10	99	80.580	Ailuropoda_melanoleuca
ENSMUSG00000031826	Usp10	99	57.750	ENSATEG00000004207	usp10	100	57.524	Anabas_testudineus
ENSMUSG00000031826	Usp10	99	73.711	ENSAPLG00000012121	USP10	99	73.836	Anas_platyrhynchos
ENSMUSG00000031826	Usp10	58	62.069	ENSACAG00000014549	-	100	62.069	Anolis_carolinensis
ENSMUSG00000031826	Usp10	100	82.228	ENSANAG00000025133	USP10	100	82.228	Aotus_nancymaae
ENSMUSG00000031826	Usp10	100	79.125	ENSBTAG00000009446	USP10	100	79.375	Bos_taurus
ENSMUSG00000031826	Usp10	100	82.103	ENSCJAG00000004067	USP10	100	82.103	Callithrix_jacchus
ENSMUSG00000031826	Usp10	99	81.084	ENSCAFG00000019946	USP10	99	81.084	Canis_familiaris
ENSMUSG00000031826	Usp10	100	80.976	ENSCAFG00020004033	USP10	100	80.976	Canis_lupus_dingo
ENSMUSG00000031826	Usp10	100	79.224	ENSCHIG00000025916	-	100	79.474	Capra_hircus
ENSMUSG00000031826	Usp10	99	80.934	ENSTSYG00000031410	USP10	99	80.934	Carlito_syrichta
ENSMUSG00000031826	Usp10	89	86.186	ENSCAPG00000004605	USP10	98	86.186	Cavia_aperea
ENSMUSG00000031826	Usp10	100	74.937	ENSCPOG00000012506	USP10	100	75.063	Cavia_porcellus
ENSMUSG00000031826	Usp10	100	81.727	ENSCCAG00000020200	USP10	100	81.727	Cebus_capucinus
ENSMUSG00000031826	Usp10	100	82.854	ENSCATG00000034771	-	100	82.854	Cercocebus_atys
ENSMUSG00000031826	Usp10	88	67.358	ENSCATG00000035640	-	96	67.358	Cercocebus_atys
ENSMUSG00000031826	Usp10	99	82.360	ENSCLAG00000001215	USP10	99	82.360	Chinchilla_lanigera
ENSMUSG00000031826	Usp10	99	82.724	ENSCSAG00000003178	USP10	100	82.724	Chlorocebus_sabaeus
ENSMUSG00000031826	Usp10	86	95.082	ENSCHOG00000004986	USP10	87	95.082	Choloepus_hoffmanni
ENSMUSG00000031826	Usp10	100	73.875	ENSCPBG00000023617	USP10	100	74.125	Chrysemys_picta_bellii
ENSMUSG00000031826	Usp10	99	75.788	ENSCANG00000041668	USP10	99	75.788	Colobus_angolensis_palliatus
ENSMUSG00000031826	Usp10	100	90.680	ENSCGRG00001016659	Usp10	100	90.680	Cricetulus_griseus_chok1gshd
ENSMUSG00000031826	Usp10	99	90.609	ENSCGRG00000015639	Usp10	99	90.609	Cricetulus_griseus_crigri
ENSMUSG00000031826	Usp10	99	81.211	ENSDNOG00000040515	USP10	99	81.211	Dasypus_novemcinctus
ENSMUSG00000031826	Usp10	100	78.643	ENSDORG00000029612	Usp10	100	79.082	Dipodomys_ordii
ENSMUSG00000031826	Usp10	80	72.317	ENSETEG00000011842	USP10	95	72.317	Echinops_telfairi
ENSMUSG00000031826	Usp10	63	76.190	ENSEASG00005013785	-	97	76.190	Equus_asinus_asinus
ENSMUSG00000031826	Usp10	100	78.208	ENSECAG00000018570	USP10	82	78.208	Equus_caballus
ENSMUSG00000031826	Usp10	100	80.601	ENSFCAG00000010831	USP10	99	80.556	Felis_catus
ENSMUSG00000031826	Usp10	99	73.929	ENSFALG00000006689	USP10	99	73.929	Ficedula_albicollis
ENSMUSG00000031826	Usp10	99	82.234	ENSFDAG00000015802	USP10	100	82.234	Fukomys_damarensis
ENSMUSG00000031826	Usp10	100	73.658	ENSGALG00000005674	USP10	100	73.783	Gallus_gallus
ENSMUSG00000031826	Usp10	99	73.140	ENSGAGG00000016089	USP10	99	73.392	Gopherus_agassizii
ENSMUSG00000031826	Usp10	100	82.979	ENSGGOG00000012792	USP10	100	82.979	Gorilla_gorilla
ENSMUSG00000031826	Usp10	100	81.761	ENSHGLG00000016812	USP10	100	81.761	Heterocephalus_glaber_female
ENSMUSG00000031826	Usp10	99	81.749	ENSHGLG00100005600	USP10	100	81.749	Heterocephalus_glaber_male
ENSMUSG00000031826	Usp10	99	85.025	ENSSTOG00000015533	USP10	100	85.025	Ictidomys_tridecemlineatus
ENSMUSG00000031826	Usp10	99	84.887	ENSJJAG00000013110	-	99	84.887	Jaculus_jaculus
ENSMUSG00000031826	Usp10	100	76.101	ENSJJAG00000022541	-	100	76.101	Jaculus_jaculus
ENSMUSG00000031826	Usp10	94	67.768	ENSLACG00000007943	USP10	99	67.768	Latimeria_chalumnae
ENSMUSG00000031826	Usp10	99	81.084	ENSLAFG00000014025	USP10	99	81.084	Loxodonta_africana
ENSMUSG00000031826	Usp10	100	83.104	ENSMFAG00000003073	USP10	100	83.104	Macaca_fascicularis
ENSMUSG00000031826	Usp10	99	70.802	ENSMMUG00000046113	-	100	70.175	Macaca_mulatta
ENSMUSG00000031826	Usp10	100	82.979	ENSMMUG00000011244	-	100	82.979	Macaca_mulatta
ENSMUSG00000031826	Usp10	100	82.854	ENSMNEG00000024456	-	100	82.854	Macaca_nemestrina
ENSMUSG00000031826	Usp10	99	82.955	ENSMLEG00000007117	USP10	99	82.955	Mandrillus_leucophaeus
ENSMUSG00000031826	Usp10	99	73.770	ENSMGAG00000007125	USP10	100	73.897	Meleagris_gallopavo
ENSMUSG00000031826	Usp10	99	82.828	ENSMICG00000028886	-	99	82.828	Microcebus_murinus
ENSMUSG00000031826	Usp10	99	76.826	ENSMODG00000004726	-	99	76.826	Monodelphis_domestica
ENSMUSG00000031826	Usp10	97	72.786	ENSMODG00000012469	-	97	72.786	Monodelphis_domestica
ENSMUSG00000031826	Usp10	100	97.856	MGP_CAROLIEiJ_G0031631	Usp10	100	97.856	Mus_caroli
ENSMUSG00000031826	Usp10	100	95.208	MGP_PahariEiJ_G0023229	Usp10	100	95.208	Mus_pahari
ENSMUSG00000031826	Usp10	100	98.991	MGP_SPRETEiJ_G0032749	Usp10	100	98.991	Mus_spretus
ENSMUSG00000031826	Usp10	99	81.108	ENSMPUG00000008738	USP10	99	81.108	Mustela_putorius_furo
ENSMUSG00000031826	Usp10	100	80.601	ENSMLUG00000025041	USP10	100	80.601	Myotis_lucifugus
ENSMUSG00000031826	Usp10	100	86.289	ENSNGAG00000019923	Usp10	100	86.289	Nannospalax_galili
ENSMUSG00000031826	Usp10	100	83.229	ENSNLEG00000011245	USP10	100	83.229	Nomascus_leucogenys
ENSMUSG00000031826	Usp10	86	94.000	ENSMEUG00000000135	USP10	89	94.000	Notamacropus_eugenii
ENSMUSG00000031826	Usp10	99	81.392	ENSODEG00000004533	USP10	99	81.392	Octodon_degus
ENSMUSG00000031826	Usp10	94	75.867	ENSOANG00000011345	USP10	99	75.867	Ornithorhynchus_anatinus
ENSMUSG00000031826	Usp10	100	70.000	ENSOGAG00000030149	-	100	70.000	Otolemur_garnettii
ENSMUSG00000031826	Usp10	99	82.850	ENSOGAG00000009372	-	99	82.850	Otolemur_garnettii
ENSMUSG00000031826	Usp10	99	78.354	ENSOARG00000011010	USP10	99	78.861	Ovis_aries
ENSMUSG00000031826	Usp10	99	82.724	ENSPPAG00000026477	USP10	100	82.702	Pan_paniscus
ENSMUSG00000031826	Usp10	100	80.476	ENSPPRG00000007182	USP10	100	80.476	Panthera_pardus
ENSMUSG00000031826	Usp10	99	66.920	ENSPTIG00000012919	USP10	100	66.920	Panthera_tigris_altaica
ENSMUSG00000031826	Usp10	100	82.728	ENSPTRG00000008421	USP10	100	82.728	Pan_troglodytes
ENSMUSG00000031826	Usp10	100	69.434	ENSPTRG00000046667	-	99	69.434	Pan_troglodytes
ENSMUSG00000031826	Usp10	88	69.206	ENSPANG00000033632	-	96	69.206	Papio_anubis
ENSMUSG00000031826	Usp10	99	82.702	ENSPANG00000007753	-	99	82.702	Papio_anubis
ENSMUSG00000031826	Usp10	100	76.971	ENSPCIG00000013527	USP10	100	76.971	Phascolarctos_cinereus
ENSMUSG00000031826	Usp10	100	83.354	ENSPPYG00000007609	USP10	100	83.354	Pongo_abelii
ENSMUSG00000031826	Usp10	100	72.682	ENSPCAG00000016034	USP10	94	72.682	Procavia_capensis
ENSMUSG00000031826	Usp10	100	82.103	ENSPCOG00000013858	USP10	100	82.103	Propithecus_coquereli
ENSMUSG00000031826	Usp10	100	92.695	ENSRNOG00000016509	Usp10	100	92.695	Rattus_norvegicus
ENSMUSG00000031826	Usp10	99	83.081	ENSRBIG00000038865	USP10	100	83.081	Rhinopithecus_bieti
ENSMUSG00000031826	Usp10	100	83.104	ENSRROG00000005451	USP10	100	83.104	Rhinopithecus_roxellana
ENSMUSG00000031826	Usp10	100	81.727	ENSSBOG00000004163	USP10	100	82.197	Saimiri_boliviensis_boliviensis
ENSMUSG00000031826	Usp10	99	76.574	ENSSHAG00000006863	USP10	99	76.769	Sarcophilus_harrisii
ENSMUSG00000031826	Usp10	99	73.131	ENSSPUG00000007982	USP10	99	73.764	Sphenodon_punctatus
ENSMUSG00000031826	Usp10	100	78.261	ENSSSCG00000002670	USP10	100	78.509	Sus_scrofa
ENSMUSG00000031826	Usp10	99	73.518	ENSTGUG00000004217	USP10	100	73.518	Taeniopygia_guttata
ENSMUSG00000031826	Usp10	99	68.939	ENSTBEG00000004843	USP10	100	68.939	Tupaia_belangeri
ENSMUSG00000031826	Usp10	99	73.559	ENSTTRG00000012001	USP10	100	73.559	Tursiops_truncatus
ENSMUSG00000031826	Usp10	100	77.597	ENSUAMG00000003075	USP10	100	77.597	Ursus_americanus
ENSMUSG00000031826	Usp10	100	77.972	ENSUMAG00000007552	USP10	100	77.972	Ursus_maritimus
ENSMUSG00000031826	Usp10	99	75.693	ENSVPAG00000010745	USP10	100	75.819	Vicugna_pacos
ENSMUSG00000031826	Usp10	100	80.976	ENSVVUG00000030314	USP10	100	80.976	Vulpes_vulpes

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0002039	p53 binding	-	ISO	Function
GO:0004197	cysteine-type endopeptidase activity	21873635.	IBA	Function
GO:0004197	cysteine-type endopeptidase activity	-	ISO	Function
GO:0004843	thiol-dependent ubiquitin-specific protease activity	21873635.	IBA	Function
GO:0004843	thiol-dependent ubiquitin-specific protease activity	-	ISO	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005654	nucleoplasm	-	ISO	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005768	endosome	-	IEA	Component
GO:0005769	early endosome	21873635.	IBA	Component
GO:0005769	early endosome	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0006281	DNA repair	-	IEA	Process
GO:0006511	ubiquitin-dependent protein catabolic process	-	IEA	Process
GO:0006914	autophagy	-	IEA	Process
GO:0006974	cellular response to DNA damage stimulus	-	ISO	Process
GO:0008233	peptidase activity	-	IEA	Function
GO:0008234	cysteine-type peptidase activity	-	IEA	Function
GO:0010506	regulation of autophagy	21873635.	IBA	Process
GO:0010506	regulation of autophagy	-	ISO	Process
GO:0016579	protein deubiquitination	21873635.	IBA	Process
GO:0016579	protein deubiquitination	-	ISO	Process
GO:0016787	hydrolase activity	-	IEA	Function
GO:0030330	DNA damage response, signal transduction by p53 class mediator	21873635.	IBA	Process
GO:0030330	DNA damage response, signal transduction by p53 class mediator	-	ISO	Process
GO:0032991	protein-containing complex	-	ISO	Component
GO:0036459	thiol-dependent ubiquitinyl hydrolase activity	-	ISO	Function
GO:0043124	negative regulation of I-kappaB kinase/NF-kappaB signaling	-	ISO	Process
GO:0044325	ion channel binding	-	ISO	Function
GO:0071347	cellular response to interleukin-1	-	ISO	Process