EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000031862 (Gene tree)
Gene ID: 170759
Gene Symbol: Atp13a1
Alias: Atp13a|Cgi152|catp
Full Name: ATPase type 13A1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 16587
Position: chr8: 69791163-69807749
Accession: 2180801
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000034326	-	3915	XM_006509564	ENSMUSP00000034326	1200 (aa)	XP_006509627	Q9EPE9

Gene Model

Click here to download ENSMUSG00000031862's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000031862's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000031862	Atp13a1	99	95.242	ENSG00000105726	ATP13A1	99	95.989	Homo_sapiens
ENSMUSG00000031862	Atp13a1	90	40.466	YEL031W	SPF1	94	38.619	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005783	endoplasmic reticulum	-	IEA	Component
GO:0006812	cation transport	-	IEA	Process
GO:0006874	cellular calcium ion homeostasis	21873635.	IBA	Process
GO:0016020	membrane	-	IEA	Component
GO:0016021	integral component of membrane	-	IEA	Component
GO:0016787	hydrolase activity	-	IEA	Function
GO:0016887	ATPase activity	-	IEA	Function
GO:0046872	metal ion binding	-	IEA	Function