EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000031917 (Gene tree)
Gene ID: 66164
Gene Symbol: Nip7
Alias: 1110017C15Rik|6330509M23Rik
Full Name: NIP7%2C nucleolar pre-rRNA processing protein
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 4055 bases
Position: chr8:107056877-107060931
Accession: 1913414
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000034392	UPF0113	PF03657.13	8.8e-23	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000034392	-	3036	-	ENSMUSP00000034392	180 (aa)	-	Q9CXK8
ENSMUST00000170962	-	606	-	ENSMUSP00000126153	133 (aa)	-	E9Q109
ENSMUST00000212281	-	546	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000031917's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000031917's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000031917	Nip7	100	97.778	ENSG00000132603	NIP7	100	97.778	Homo_sapiens
ENSMUSG00000031917	Nip7	100	84.444	ENSAPOG00000005901	nip7	100	84.444	Acanthochromis_polyacanthus
ENSMUSG00000031917	Nip7	100	96.667	ENSAMEG00000007542	NIP7	100	96.667	Ailuropoda_melanoleuca
ENSMUSG00000031917	Nip7	100	84.444	ENSAOCG00000017498	nip7	100	84.444	Amphiprion_ocellaris
ENSMUSG00000031917	Nip7	100	84.444	ENSAPEG00000002824	nip7	100	84.444	Amphiprion_percula
ENSMUSG00000031917	Nip7	100	83.889	ENSATEG00000019165	nip7	100	83.889	Anabas_testudineus
ENSMUSG00000031917	Nip7	100	84.444	ENSACAG00000003476	NIP7	100	84.444	Anolis_carolinensis
ENSMUSG00000031917	Nip7	100	97.222	ENSANAG00000037006	NIP7	100	97.222	Aotus_nancymaae
ENSMUSG00000031917	Nip7	100	83.333	ENSACLG00000012368	nip7	100	83.333	Astatotilapia_calliptera
ENSMUSG00000031917	Nip7	100	83.333	ENSAMXG00000003634	nip7	100	70.000	Astyanax_mexicanus
ENSMUSG00000031917	Nip7	100	97.222	ENSBTAG00000001666	NIP7	100	97.222	Bos_taurus
ENSMUSG00000031917	Nip7	99	60.894	WBGene00016607	C43E11.9	99	60.894	Caenorhabditis_elegans
ENSMUSG00000031917	Nip7	100	97.222	ENSCJAG00000015364	NIP7	100	97.222	Callithrix_jacchus
ENSMUSG00000031917	Nip7	100	95.000	ENSCAFG00000029835	NIP7	95	95.000	Canis_familiaris
ENSMUSG00000031917	Nip7	100	96.667	ENSCHIG00000019332	-	100	96.667	Capra_hircus
ENSMUSG00000031917	Nip7	100	97.222	ENSTSYG00000032526	NIP7	100	97.222	Carlito_syrichta
ENSMUSG00000031917	Nip7	100	96.667	ENSCPOG00000003712	NIP7	100	96.667	Cavia_porcellus
ENSMUSG00000031917	Nip7	100	97.222	ENSCCAG00000023481	NIP7	100	97.222	Cebus_capucinus
ENSMUSG00000031917	Nip7	100	72.222	ENSCATG00000006216	-	80	72.222	Cercocebus_atys
ENSMUSG00000031917	Nip7	100	97.222	ENSCATG00000031010	NIP7	100	97.222	Cercocebus_atys
ENSMUSG00000031917	Nip7	100	95.000	ENSCLAG00000007579	NIP7	100	95.000	Chinchilla_lanigera
ENSMUSG00000031917	Nip7	100	97.778	ENSCSAG00000004137	NIP7	100	97.778	Chlorocebus_sabaeus
ENSMUSG00000031917	Nip7	100	62.778	ENSCSAG00000015707	-	100	62.778	Chlorocebus_sabaeus
ENSMUSG00000031917	Nip7	100	86.111	ENSCHOG00000010787	NIP7	99	86.111	Choloepus_hoffmanni
ENSMUSG00000031917	Nip7	100	90.556	ENSCPBG00000027051	NIP7	100	90.556	Chrysemys_picta_bellii
ENSMUSG00000031917	Nip7	100	73.333	ENSCING00000006610	-	100	73.333	Ciona_intestinalis
ENSMUSG00000031917	Nip7	100	73.333	ENSCSAVG00000009157	-	100	73.333	Ciona_savignyi
ENSMUSG00000031917	Nip7	100	97.222	ENSCANG00000029815	NIP7	100	97.222	Colobus_angolensis_palliatus
ENSMUSG00000031917	Nip7	100	89.444	ENSCGRG00001010780	-	100	89.444	Cricetulus_griseus_chok1gshd
ENSMUSG00000031917	Nip7	98	81.921	ENSCGRG00001020027	-	95	81.921	Cricetulus_griseus_chok1gshd
ENSMUSG00000031917	Nip7	100	98.333	ENSCGRG00001008966	-	100	98.333	Cricetulus_griseus_chok1gshd
ENSMUSG00000031917	Nip7	100	88.333	ENSCGRG00000000567	-	100	88.333	Cricetulus_griseus_crigri
ENSMUSG00000031917	Nip7	100	98.333	ENSCGRG00000001344	-	100	98.333	Cricetulus_griseus_crigri
ENSMUSG00000031917	Nip7	92	83.636	ENSCGRG00000007805	-	100	83.636	Cricetulus_griseus_crigri
ENSMUSG00000031917	Nip7	100	84.444	ENSCSEG00000011356	nip7	100	84.444	Cynoglossus_semilaevis
ENSMUSG00000031917	Nip7	100	83.889	ENSCVAG00000012170	nip7	100	83.889	Cyprinodon_variegatus
ENSMUSG00000031917	Nip7	100	82.222	ENSDARG00000059075	nip7	100	82.222	Danio_rerio
ENSMUSG00000031917	Nip7	100	98.333	ENSDNOG00000006821	NIP7	100	98.333	Dasypus_novemcinctus
ENSMUSG00000031917	Nip7	100	96.667	ENSDORG00000027163	Nip7	100	96.667	Dipodomys_ordii
ENSMUSG00000031917	Nip7	99	65.363	FBgn0039233	CG7006	99	65.363	Drosophila_melanogaster
ENSMUSG00000031917	Nip7	100	96.667	ENSETEG00000013549	NIP7	100	96.667	Echinops_telfairi
ENSMUSG00000031917	Nip7	99	77.654	ENSEBUG00000015270	nip7	99	77.654	Eptatretus_burgeri
ENSMUSG00000031917	Nip7	100	97.222	ENSEASG00005021312	NIP7	100	97.222	Equus_asinus_asinus
ENSMUSG00000031917	Nip7	100	97.222	ENSECAG00000036727	NIP7	100	97.222	Equus_caballus
ENSMUSG00000031917	Nip7	100	97.222	ENSEEUG00000008660	NIP7	100	97.222	Erinaceus_europaeus
ENSMUSG00000031917	Nip7	100	96.667	ENSFCAG00000013574	NIP7	100	96.667	Felis_catus
ENSMUSG00000031917	Nip7	89	85.093	ENSFALG00000002761	NIP7	100	85.093	Ficedula_albicollis
ENSMUSG00000031917	Nip7	100	96.667	ENSFDAG00000015970	NIP7	100	96.667	Fukomys_damarensis
ENSMUSG00000031917	Nip7	100	66.129	ENSFHEG00000008752	nip7	100	66.129	Fundulus_heteroclitus
ENSMUSG00000031917	Nip7	91	80.488	ENSGMOG00000005786	nip7	95	80.488	Gadus_morhua
ENSMUSG00000031917	Nip7	100	86.111	ENSGALG00000000650	NIP7	100	86.111	Gallus_gallus
ENSMUSG00000031917	Nip7	100	83.889	ENSGAFG00000009138	nip7	100	83.889	Gambusia_affinis
ENSMUSG00000031917	Nip7	100	80.556	ENSGACG00000016301	nip7	100	80.556	Gasterosteus_aculeatus
ENSMUSG00000031917	Nip7	82	91.216	ENSGAGG00000000314	NIP7	100	91.216	Gopherus_agassizii
ENSMUSG00000031917	Nip7	100	97.778	ENSGGOG00000022785	NIP7	100	97.778	Gorilla_gorilla
ENSMUSG00000031917	Nip7	100	77.778	ENSGGOG00000007747	-	100	77.778	Gorilla_gorilla
ENSMUSG00000031917	Nip7	100	83.333	ENSHBUG00000020049	nip7	100	83.333	Haplochromis_burtoni
ENSMUSG00000031917	Nip7	100	96.111	ENSHGLG00000017478	NIP7	100	96.111	Heterocephalus_glaber_female
ENSMUSG00000031917	Nip7	100	96.111	ENSHGLG00100005353	NIP7	100	96.111	Heterocephalus_glaber_male
ENSMUSG00000031917	Nip7	100	81.667	ENSHCOG00000018004	nip7	100	81.667	Hippocampus_comes
ENSMUSG00000031917	Nip7	100	82.778	ENSIPUG00000007516	nip7	100	82.778	Ictalurus_punctatus
ENSMUSG00000031917	Nip7	100	97.778	ENSSTOG00000012871	NIP7	100	97.778	Ictidomys_tridecemlineatus
ENSMUSG00000031917	Nip7	100	72.778	ENSJJAG00000001553	-	100	72.778	Jaculus_jaculus
ENSMUSG00000031917	Nip7	99	87.709	ENSJJAG00000017333	-	100	87.709	Jaculus_jaculus
ENSMUSG00000031917	Nip7	96	97.110	ENSJJAG00000018787	-	99	96.988	Jaculus_jaculus
ENSMUSG00000031917	Nip7	100	82.778	ENSKMAG00000018713	nip7	100	82.778	Kryptolebias_marmoratus
ENSMUSG00000031917	Nip7	100	84.444	ENSLBEG00000005274	nip7	100	84.444	Labrus_bergylta
ENSMUSG00000031917	Nip7	100	90.000	ENSLACG00000006594	NIP7	100	90.000	Latimeria_chalumnae
ENSMUSG00000031917	Nip7	100	85.000	ENSLOCG00000001379	nip7	100	85.000	Lepisosteus_oculatus
ENSMUSG00000031917	Nip7	100	96.111	ENSLAFG00000004830	NIP7	100	96.111	Loxodonta_africana
ENSMUSG00000031917	Nip7	84	78.947	ENSMFAG00000002077	-	100	78.947	Macaca_fascicularis
ENSMUSG00000031917	Nip7	100	91.111	ENSMFAG00000013965	-	100	91.111	Macaca_fascicularis
ENSMUSG00000031917	Nip7	100	97.222	ENSMFAG00000046374	NIP7	100	97.222	Macaca_fascicularis
ENSMUSG00000031917	Nip7	50	97.778	ENSMMUG00000016635	-	79	97.778	Macaca_mulatta
ENSMUSG00000031917	Nip7	100	91.667	ENSMMUG00000046403	-	100	91.667	Macaca_mulatta
ENSMUSG00000031917	Nip7	100	73.889	ENSMMUG00000043208	-	80	73.889	Macaca_mulatta
ENSMUSG00000031917	Nip7	100	96.667	ENSMNEG00000037905	NIP7	100	96.667	Macaca_nemestrina
ENSMUSG00000031917	Nip7	100	97.222	ENSMLEG00000042389	NIP7	100	97.222	Mandrillus_leucophaeus
ENSMUSG00000031917	Nip7	84	77.632	ENSMLEG00000030257	-	100	77.632	Mandrillus_leucophaeus
ENSMUSG00000031917	Nip7	97	83.051	ENSMLEG00000037105	-	96	83.051	Mandrillus_leucophaeus
ENSMUSG00000031917	Nip7	100	85.000	ENSMAMG00000020375	nip7	100	85.000	Mastacembelus_armatus
ENSMUSG00000031917	Nip7	100	83.333	ENSMZEG00005009767	nip7	100	83.333	Maylandia_zebra
ENSMUSG00000031917	Nip7	89	88.820	ENSMGAG00000008556	NIP7	100	88.820	Meleagris_gallopavo
ENSMUSG00000031917	Nip7	100	98.889	ENSMAUG00000019255	Nip7	100	98.889	Mesocricetus_auratus
ENSMUSG00000031917	Nip7	100	97.778	ENSMICG00000009664	NIP7	100	97.778	Microcebus_murinus
ENSMUSG00000031917	Nip7	100	98.333	ENSMOCG00000020110	Nip7	100	98.333	Microtus_ochrogaster
ENSMUSG00000031917	Nip7	100	75.000	ENSMMOG00000000657	nip7	100	75.000	Mola_mola
ENSMUSG00000031917	Nip7	99	88.268	ENSMODG00000002782	NIP7	99	88.268	Monodelphis_domestica
ENSMUSG00000031917	Nip7	100	84.444	ENSMALG00000008166	nip7	100	84.444	Monopterus_albus
ENSMUSG00000031917	Nip7	100	100.000	MGP_CAROLIEiJ_G0031530	Nip7	100	100.000	Mus_caroli
ENSMUSG00000031917	Nip7	100	99.444	MGP_PahariEiJ_G0023130	Nip7	100	99.444	Mus_pahari
ENSMUSG00000031917	Nip7	100	100.000	MGP_SPRETEiJ_G0032648	Nip7	100	100.000	Mus_spretus
ENSMUSG00000031917	Nip7	100	97.778	ENSMLUG00000011835	NIP7	100	97.778	Myotis_lucifugus
ENSMUSG00000031917	Nip7	99	76.536	ENSNGAG00000012129	-	91	76.536	Nannospalax_galili
ENSMUSG00000031917	Nip7	100	96.667	ENSNGAG00000006098	Nip7	100	96.667	Nannospalax_galili
ENSMUSG00000031917	Nip7	100	83.333	ENSNBRG00000001950	nip7	100	83.333	Neolamprologus_brichardi
ENSMUSG00000031917	Nip7	100	95.000	ENSNLEG00000005492	NIP7	100	95.000	Nomascus_leucogenys
ENSMUSG00000031917	Nip7	99	87.151	ENSMEUG00000002818	NIP7	99	87.151	Notamacropus_eugenii
ENSMUSG00000031917	Nip7	100	95.556	ENSOPRG00000006981	NIP7	100	95.556	Ochotona_princeps
ENSMUSG00000031917	Nip7	100	96.667	ENSODEG00000014849	-	100	96.667	Octodon_degus
ENSMUSG00000031917	Nip7	100	81.667	ENSODEG00000000559	-	100	81.667	Octodon_degus
ENSMUSG00000031917	Nip7	100	83.333	ENSONIG00000017181	nip7	100	83.333	Oreochromis_niloticus
ENSMUSG00000031917	Nip7	100	96.111	ENSOCUG00000017652	NIP7	100	96.111	Oryctolagus_cuniculus
ENSMUSG00000031917	Nip7	100	82.778	ENSORLG00000011734	nip7	100	82.778	Oryzias_latipes
ENSMUSG00000031917	Nip7	100	82.778	ENSORLG00020002338	nip7	100	82.778	Oryzias_latipes_hni
ENSMUSG00000031917	Nip7	100	82.778	ENSORLG00015001005	nip7	100	82.778	Oryzias_latipes_hsok
ENSMUSG00000031917	Nip7	100	82.222	ENSOMEG00000011688	nip7	100	82.222	Oryzias_melastigma
ENSMUSG00000031917	Nip7	100	97.222	ENSOGAG00000008066	NIP7	100	97.222	Otolemur_garnettii
ENSMUSG00000031917	Nip7	100	96.667	ENSOARG00000003558	NIP7	100	96.667	Ovis_aries
ENSMUSG00000031917	Nip7	100	79.444	ENSPPAG00000006091	-	100	79.444	Pan_paniscus
ENSMUSG00000031917	Nip7	100	97.778	ENSPPAG00000000218	NIP7	100	97.778	Pan_paniscus
ENSMUSG00000031917	Nip7	100	96.667	ENSPPRG00000009719	NIP7	100	96.667	Panthera_pardus
ENSMUSG00000031917	Nip7	100	96.667	ENSPTIG00000010113	NIP7	100	96.667	Panthera_tigris_altaica
ENSMUSG00000031917	Nip7	100	79.444	ENSPTRG00000051330	-	100	79.444	Pan_troglodytes
ENSMUSG00000031917	Nip7	100	97.778	ENSPTRG00000051089	NIP7	100	97.778	Pan_troglodytes
ENSMUSG00000031917	Nip7	100	73.889	ENSPANG00000035982	-	100	73.889	Papio_anubis
ENSMUSG00000031917	Nip7	100	97.222	ENSPANG00000033665	-	100	97.222	Papio_anubis
ENSMUSG00000031917	Nip7	100	72.778	ENSPANG00000029979	-	80	72.778	Papio_anubis
ENSMUSG00000031917	Nip7	100	83.889	ENSPKIG00000020345	nip7	76	83.889	Paramormyrops_kingsleyae
ENSMUSG00000031917	Nip7	91	89.571	ENSPSIG00000011210	NIP7	100	89.571	Pelodiscus_sinensis
ENSMUSG00000031917	Nip7	100	98.333	ENSPEMG00000011304	Nip7	100	98.333	Peromyscus_maniculatus_bairdii
ENSMUSG00000031917	Nip7	99	88.827	ENSPCIG00000012768	NIP7	99	88.827	Phascolarctos_cinereus
ENSMUSG00000031917	Nip7	100	83.333	ENSPFOG00000014985	nip7	100	83.333	Poecilia_formosa
ENSMUSG00000031917	Nip7	100	83.333	ENSPLAG00000005031	nip7	100	83.333	Poecilia_latipinna
ENSMUSG00000031917	Nip7	100	83.333	ENSPMEG00000008213	nip7	100	83.333	Poecilia_mexicana
ENSMUSG00000031917	Nip7	100	97.778	ENSPPYG00000007503	NIP7	100	97.778	Pongo_abelii
ENSMUSG00000031917	Nip7	100	96.667	ENSPCOG00000011060	NIP7	100	96.667	Propithecus_coquereli
ENSMUSG00000031917	Nip7	100	97.222	ENSPVAG00000015980	NIP7	100	97.222	Pteropus_vampyrus
ENSMUSG00000031917	Nip7	100	83.333	ENSPNYG00000018316	nip7	100	83.333	Pundamilia_nyererei
ENSMUSG00000031917	Nip7	100	83.333	ENSPNAG00000027680	nip7	100	70.000	Pygocentrus_nattereri
ENSMUSG00000031917	Nip7	100	97.222	ENSRNOG00000020391	Nip7	100	97.222	Rattus_norvegicus
ENSMUSG00000031917	Nip7	95	90.058	ENSRBIG00000039934	-	100	90.058	Rhinopithecus_bieti
ENSMUSG00000031917	Nip7	96	77.841	ENSRBIG00000033803	-	99	77.841	Rhinopithecus_bieti
ENSMUSG00000031917	Nip7	100	67.778	ENSRROG00000044739	-	78	67.778	Rhinopithecus_roxellana
ENSMUSG00000031917	Nip7	100	96.667	ENSRROG00000026840	NIP7	100	96.667	Rhinopithecus_roxellana
ENSMUSG00000031917	Nip7	99	56.425	YPL211W	-	99	56.425	Saccharomyces_cerevisiae
ENSMUSG00000031917	Nip7	100	97.222	ENSSBOG00000027548	NIP7	100	97.222	Saimiri_boliviensis_boliviensis
ENSMUSG00000031917	Nip7	100	87.222	ENSSFOG00015008579	nip7	100	87.222	Scleropages_formosus
ENSMUSG00000031917	Nip7	100	82.778	ENSSMAG00000006217	nip7	100	82.778	Scophthalmus_maximus
ENSMUSG00000031917	Nip7	100	82.222	ENSSDUG00000002698	nip7	100	82.222	Seriola_dumerili
ENSMUSG00000031917	Nip7	100	82.222	ENSSLDG00000005153	nip7	100	82.222	Seriola_lalandi_dorsalis
ENSMUSG00000031917	Nip7	100	96.111	ENSSARG00000000303	NIP7	100	96.111	Sorex_araneus
ENSMUSG00000031917	Nip7	100	86.667	ENSSPUG00000005858	NIP7	100	86.667	Sphenodon_punctatus
ENSMUSG00000031917	Nip7	100	83.889	ENSSPAG00000017699	nip7	100	83.889	Stegastes_partitus
ENSMUSG00000031917	Nip7	100	97.222	ENSSSCG00000033741	NIP7	100	97.222	Sus_scrofa
ENSMUSG00000031917	Nip7	100	83.333	ENSTGUG00000008073	NIP7	100	83.333	Taeniopygia_guttata
ENSMUSG00000031917	Nip7	100	83.333	ENSTRUG00000020267	nip7	100	83.333	Takifugu_rubripes
ENSMUSG00000031917	Nip7	100	83.889	ENSTNIG00000004660	nip7	100	83.889	Tetraodon_nigroviridis
ENSMUSG00000031917	Nip7	100	97.778	ENSTTRG00000010012	NIP7	100	97.778	Tursiops_truncatus
ENSMUSG00000031917	Nip7	100	96.667	ENSUAMG00000022688	NIP7	100	96.667	Ursus_americanus
ENSMUSG00000031917	Nip7	100	96.667	ENSUMAG00000018771	NIP7	100	96.667	Ursus_maritimus
ENSMUSG00000031917	Nip7	100	97.778	ENSVPAG00000003991	NIP7	100	97.778	Vicugna_pacos
ENSMUSG00000031917	Nip7	100	81.215	ENSVVUG00000008406	-	100	81.215	Vulpes_vulpes
ENSMUSG00000031917	Nip7	100	95.000	ENSVVUG00000017160	-	100	95.000	Vulpes_vulpes
ENSMUSG00000031917	Nip7	100	90.556	ENSXETG00000017853	nip7	100	90.556	Xenopus_tropicalis
ENSMUSG00000031917	Nip7	100	83.889	ENSXMAG00000025276	nip7	100	83.889	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003723	RNA binding	-	IEA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005730	nucleolus	-	ISO	Component
GO:0005829	cytosol	-	ISO	Component
GO:0030687	preribosome, large subunit precursor	21873635.	IBA	Component
GO:0042254	ribosome biogenesis	-	IEA	Process
GO:0042255	ribosome assembly	-	IEA	Process
GO:0042273	ribosomal large subunit biogenesis	21873635.	IBA	Process