EuRBPDB

Description

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000216406	-	743	-	ENSMUSP00000150968	211 (aa)	-	A0A1L1SV12
ENSMUST00000213788	-	820	-	ENSMUSP00000148980	199 (aa)	-	A0A1L1SQB3
ENSMUST00000034411	-	3964	XM_006510157	ENSMUSP00000034411	649 (aa)	XP_006510221	Q8VCD5
ENSMUST00000213356	-	735	-	-	- (aa)	-	-

Gene Model

Pathways

Pathway ID	Pathway Name	Source
mmu04919	Thyroid hormone signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000151	ubiquitin ligase complex	-	ISO	Component
GO:0003712	transcription coregulator activity	21873635.	IBA	Function
GO:0003712	transcription coregulator activity	-	ISO	Function
GO:0003713	transcription coactivator activity	-	ISO	Function
GO:0005515	protein binding	19338389.	IPI	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005667	transcription factor complex	-	ISO	Component
GO:0006357	regulation of transcription by RNA polymerase II	21873635.	IBA	Process
GO:0006357	regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0006367	transcription initiation from RNA polymerase II promoter	-	ISO	Process
GO:0016567	protein ubiquitination	-	ISO	Process
GO:0016592	mediator complex	21873635.	IBA	Component
GO:0016592	mediator complex	15340084.20508642.	IDA	Component
GO:0016592	mediator complex	14638676.	ISO	Component
GO:0019827	stem cell population maintenance	20720539.	IMP	Process
GO:0030374	nuclear receptor transcription coactivator activity	-	ISO	Function
GO:0045893	positive regulation of transcription, DNA-templated	-	ISO	Process
GO:0045944	positive regulation of transcription by RNA polymerase II	-	ISO	Process
GO:0046966	thyroid hormone receptor binding	-	ISO	Function
GO:0061630	ubiquitin protein ligase activity	-	ISO	Function
GO:0070847	core mediator complex	21873635.	IBA	Component