EuRBPDB

Description

RBDs

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000032042 (Gene tree)
Gene ID: 67398
Gene Symbol: Srpr
Alias: 1300011P19Rik|D11Mgi27
Full Name: signal recognition particle receptor ('docking protein')
Gene Type: protein_coding
Species: Mus_musculus
Status: confidence
Strand: Plus strand
Length: 47799 bases
Position: chr9:35200175-35247973
Accession: 1914648
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMUSP00000034541	SRP54	PF00448.22	4.3e-47	1	1
ENSMUSP00000115104	SRP54	PF00448.22	1.8e-19	1	1
ENSMUSP00000034541	SRP54_N	PF02881.19	2e-08	1	1

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000154005	-	478	-	-	- (aa)	-	-
ENSMUST00000132799	-	630	-	ENSMUSP00000115104	153 (aa)	-	F6VF36
ENSMUST00000138287	-	759	-	ENSMUSP00000149923	144 (aa)	-	A0A1L1SSI7
ENSMUST00000034541	-	2993	-	ENSMUSP00000034541	636 (aa)	-	Q9DBG7

Gene Model

Click here to download ENSMUSG00000032042's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000032042's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000032042	Srpr	100	97.179	ENSG00000182934	SRPRA	100	97.179	Homo_sapiens
ENSMUSG00000032042	Srpr	86	89.394	ENSAPOG00000017588	srpra	100	68.397	Acanthochromis_polyacanthus
ENSMUSG00000032042	Srpr	100	96.082	ENSAMEG00000000117	SRPRA	100	96.082	Ailuropoda_melanoleuca
ENSMUSG00000032042	Srpr	88	87.407	ENSACIG00000021588	srpra	100	66.667	Amphilophus_citrinellus
ENSMUSG00000032042	Srpr	86	89.394	ENSAOCG00000018884	srpra	100	68.550	Amphiprion_ocellaris
ENSMUSG00000032042	Srpr	86	89.394	ENSAPEG00000022286	srpra	100	67.398	Amphiprion_percula
ENSMUSG00000032042	Srpr	86	87.879	ENSATEG00000023578	srpra	100	67.737	Anabas_testudineus
ENSMUSG00000032042	Srpr	86	93.939	ENSAPLG00000016079	SRPRA	100	78.947	Anas_platyrhynchos
ENSMUSG00000032042	Srpr	86	93.182	ENSACAG00000000108	SRPRA	100	76.923	Anolis_carolinensis
ENSMUSG00000032042	Srpr	100	96.552	ENSANAG00000020346	SRPRA	100	96.552	Aotus_nancymaae
ENSMUSG00000032042	Srpr	86	89.394	ENSACLG00000000518	srpra	100	67.835	Astatotilapia_calliptera
ENSMUSG00000032042	Srpr	86	89.394	ENSAMXG00000009975	srpra	100	65.055	Astyanax_mexicanus
ENSMUSG00000032042	Srpr	100	96.088	ENSBTAG00000014105	SRPRA	100	96.088	Bos_taurus
ENSMUSG00000032042	Srpr	86	72.180	WBGene00009521	F38A1.8	99	49.160	Caenorhabditis_elegans
ENSMUSG00000032042	Srpr	100	96.552	ENSCJAG00000008752	SRPRA	100	96.552	Callithrix_jacchus
ENSMUSG00000032042	Srpr	100	93.574	ENSCAFG00000010474	SRPRA	100	93.574	Canis_familiaris
ENSMUSG00000032042	Srpr	100	95.611	ENSCAFG00020010608	SRPRA	100	95.611	Canis_lupus_dingo
ENSMUSG00000032042	Srpr	100	95.149	ENSCHIG00000012423	SRPRA	100	95.149	Capra_hircus
ENSMUSG00000032042	Srpr	86	98.485	ENSTSYG00000005187	SRPRA	100	98.324	Carlito_syrichta
ENSMUSG00000032042	Srpr	86	98.485	ENSCAPG00000007098	SRPRA	91	97.744	Cavia_aperea
ENSMUSG00000032042	Srpr	100	96.546	ENSCPOG00000014976	SRPRA	100	96.546	Cavia_porcellus
ENSMUSG00000032042	Srpr	100	96.552	ENSCCAG00000025602	SRPRA	100	96.552	Cebus_capucinus
ENSMUSG00000032042	Srpr	100	97.335	ENSCATG00000039354	SRPRA	100	97.335	Cercocebus_atys
ENSMUSG00000032042	Srpr	100	97.174	ENSCLAG00000016839	SRPRA	100	97.174	Chinchilla_lanigera
ENSMUSG00000032042	Srpr	100	97.022	ENSCSAG00000002271	SRPRA	100	97.022	Chlorocebus_sabaeus
ENSMUSG00000032042	Srpr	86	97.727	ENSCHOG00000010015	-	73	98.469	Choloepus_hoffmanni
ENSMUSG00000032042	Srpr	86	94.697	ENSCPBG00000011128	SRPRA	100	78.187	Chrysemys_picta_bellii
ENSMUSG00000032042	Srpr	86	81.061	ENSCING00000008954	-	100	58.563	Ciona_intestinalis
ENSMUSG00000032042	Srpr	86	80.303	ENSCSAVG00000005602	-	100	59.447	Ciona_savignyi
ENSMUSG00000032042	Srpr	100	95.925	ENSCANG00000032337	SRPRA	100	95.925	Colobus_angolensis_palliatus
ENSMUSG00000032042	Srpr	100	98.742	ENSCGRG00001017670	Srpr	100	98.742	Cricetulus_griseus_chok1gshd
ENSMUSG00000032042	Srpr	100	98.742	ENSCGRG00000009892	Srpr	100	98.742	Cricetulus_griseus_crigri
ENSMUSG00000032042	Srpr	86	87.879	ENSCSEG00000002374	srpra	100	68.485	Cynoglossus_semilaevis
ENSMUSG00000032042	Srpr	86	88.636	ENSCVAG00000019881	srpra	100	69.091	Cyprinodon_variegatus
ENSMUSG00000032042	Srpr	86	90.909	ENSDARG00000061124	srpra	100	67.474	Danio_rerio
ENSMUSG00000032042	Srpr	100	94.264	ENSDNOG00000010821	SRPRA	100	94.264	Dasypus_novemcinctus
ENSMUSG00000032042	Srpr	100	97.017	ENSDORG00000016719	Srpr	100	97.017	Dipodomys_ordii
ENSMUSG00000032042	Srpr	86	78.788	FBgn0010391	Gtp-bp	100	51.468	Drosophila_melanogaster
ENSMUSG00000032042	Srpr	100	92.356	ENSETEG00000013956	SRPRA	100	92.356	Echinops_telfairi
ENSMUSG00000032042	Srpr	86	85.606	ENSEBUG00000002602	srpra	92	68.841	Eptatretus_burgeri
ENSMUSG00000032042	Srpr	100	94.992	ENSEASG00005022980	SRPRA	100	94.992	Equus_asinus_asinus
ENSMUSG00000032042	Srpr	100	95.149	ENSECAG00000014692	SRPRA	100	95.149	Equus_caballus
ENSMUSG00000032042	Srpr	100	86.293	ENSEEUG00000007920	SRPRA	100	86.293	Erinaceus_europaeus
ENSMUSG00000032042	Srpr	86	87.879	ENSELUG00000017643	srpra	100	68.892	Esox_lucius
ENSMUSG00000032042	Srpr	80	94.129	ENSFCAG00000030894	-	99	94.129	Felis_catus
ENSMUSG00000032042	Srpr	100	95.618	ENSFCAG00000011274	-	100	95.618	Felis_catus
ENSMUSG00000032042	Srpr	86	93.939	ENSFALG00000005048	SRPRA	99	74.688	Ficedula_albicollis
ENSMUSG00000032042	Srpr	100	97.488	ENSFDAG00000016229	SRPRA	100	97.488	Fukomys_damarensis
ENSMUSG00000032042	Srpr	86	88.636	ENSFHEG00000016959	srpra	100	68.024	Fundulus_heteroclitus
ENSMUSG00000032042	Srpr	86	88.636	ENSGMOG00000013244	srpra	100	68.944	Gadus_morhua
ENSMUSG00000032042	Srpr	86	93.939	ENSGALG00000030759	SRPRA	100	79.012	Gallus_gallus
ENSMUSG00000032042	Srpr	86	88.636	ENSGAFG00000000453	srpra	100	68.997	Gambusia_affinis
ENSMUSG00000032042	Srpr	86	88.636	ENSGACG00000006550	srpra	100	67.697	Gasterosteus_aculeatus
ENSMUSG00000032042	Srpr	86	93.939	ENSGAGG00000021157	SRPRA	100	78.955	Gopherus_agassizii
ENSMUSG00000032042	Srpr	100	97.022	ENSGGOG00000012962	SRPRA	100	97.022	Gorilla_gorilla
ENSMUSG00000032042	Srpr	86	88.636	ENSHBUG00000000119	srpra	100	67.683	Haplochromis_burtoni
ENSMUSG00000032042	Srpr	100	96.546	ENSHGLG00000001597	SRPR	100	96.546	Heterocephalus_glaber_female
ENSMUSG00000032042	Srpr	100	96.546	ENSHGLG00100006449	SRPR	100	96.546	Heterocephalus_glaber_male
ENSMUSG00000032042	Srpr	86	90.909	ENSHCOG00000010749	srpra	100	67.665	Hippocampus_comes
ENSMUSG00000032042	Srpr	86	87.879	ENSIPUG00000000867	srpra	99	64.065	Ictalurus_punctatus
ENSMUSG00000032042	Srpr	100	97.335	ENSSTOG00000009897	SRPRA	100	97.335	Ictidomys_tridecemlineatus
ENSMUSG00000032042	Srpr	100	97.645	ENSJJAG00000020272	Srpr	100	97.645	Jaculus_jaculus
ENSMUSG00000032042	Srpr	86	90.152	ENSKMAG00000002280	srpra	100	68.825	Kryptolebias_marmoratus
ENSMUSG00000032042	Srpr	86	88.636	ENSLBEG00000009608	srpra	100	67.933	Labrus_bergylta
ENSMUSG00000032042	Srpr	86	86.364	ENSLACG00000017781	SRPRA	100	70.661	Latimeria_chalumnae
ENSMUSG00000032042	Srpr	86	88.722	ENSLOCG00000002733	srpra	100	67.678	Lepisosteus_oculatus
ENSMUSG00000032042	Srpr	100	94.366	ENSLAFG00000010252	SRPRA	100	94.366	Loxodonta_africana
ENSMUSG00000032042	Srpr	100	97.179	ENSMFAG00000032606	SRPRA	100	97.179	Macaca_fascicularis
ENSMUSG00000032042	Srpr	100	97.179	ENSMMUG00000007938	SRPRA	100	97.179	Macaca_mulatta
ENSMUSG00000032042	Srpr	100	97.022	ENSMNEG00000030709	SRPRA	100	97.022	Macaca_nemestrina
ENSMUSG00000032042	Srpr	100	97.335	ENSMLEG00000043404	SRPRA	100	97.335	Mandrillus_leucophaeus
ENSMUSG00000032042	Srpr	86	87.879	ENSMAMG00000000473	srpra	100	68.030	Mastacembelus_armatus
ENSMUSG00000032042	Srpr	86	89.394	ENSMZEG00005013432	srpra	100	67.835	Maylandia_zebra
ENSMUSG00000032042	Srpr	86	93.182	ENSMGAG00000000732	SRPRA	100	78.347	Meleagris_gallopavo
ENSMUSG00000032042	Srpr	100	98.428	ENSMAUG00000015648	Srpr	100	98.428	Mesocricetus_auratus
ENSMUSG00000032042	Srpr	100	96.082	ENSMICG00000015981	SRPRA	100	96.082	Microcebus_murinus
ENSMUSG00000032042	Srpr	100	98.742	ENSMOCG00000008311	Srpr	100	98.742	Microtus_ochrogaster
ENSMUSG00000032042	Srpr	86	88.636	ENSMMOG00000005019	srpra	100	67.127	Mola_mola
ENSMUSG00000032042	Srpr	73	92.793	ENSMODG00000029422	-	100	88.889	Monodelphis_domestica
ENSMUSG00000032042	Srpr	100	89.671	ENSMODG00000004576	-	100	89.671	Monodelphis_domestica
ENSMUSG00000032042	Srpr	86	88.636	ENSMALG00000011343	srpra	100	68.741	Monopterus_albus
ENSMUSG00000032042	Srpr	100	99.371	MGP_CAROLIEiJ_G0031951	Srpr	100	99.371	Mus_caroli
ENSMUSG00000032042	Srpr	100	99.528	MGP_PahariEiJ_G0014816	Srpr	100	99.528	Mus_pahari
ENSMUSG00000032042	Srpr	100	94.760	MGP_SPRETEiJ_G0033075	Srpr	100	94.760	Mus_spretus
ENSMUSG00000032042	Srpr	100	95.611	ENSMPUG00000006626	SRPRA	100	95.611	Mustela_putorius_furo
ENSMUSG00000032042	Srpr	100	94.828	ENSMLUG00000017334	SRPRA	100	94.828	Myotis_lucifugus
ENSMUSG00000032042	Srpr	100	97.645	ENSNGAG00000015686	Srpr	100	97.645	Nannospalax_galili
ENSMUSG00000032042	Srpr	86	89.394	ENSNBRG00000017311	srpra	100	67.688	Neolamprologus_brichardi
ENSMUSG00000032042	Srpr	95	97.368	ENSNLEG00000007467	SRPRA	100	97.368	Nomascus_leucogenys
ENSMUSG00000032042	Srpr	94	90.000	ENSMEUG00000004956	SRPRA	100	90.000	Notamacropus_eugenii
ENSMUSG00000032042	Srpr	100	89.358	ENSOPRG00000013160	SRPRA	100	89.358	Ochotona_princeps
ENSMUSG00000032042	Srpr	100	95.918	ENSODEG00000004730	SRPRA	100	95.918	Octodon_degus
ENSMUSG00000032042	Srpr	86	88.636	ENSONIG00000005324	srpra	100	67.835	Oreochromis_niloticus
ENSMUSG00000032042	Srpr	100	97.022	ENSOCUG00000017057	SRPRA	100	97.022	Oryctolagus_cuniculus
ENSMUSG00000032042	Srpr	86	89.394	ENSORLG00000014676	srpra	100	68.356	Oryzias_latipes
ENSMUSG00000032042	Srpr	86	89.394	ENSORLG00020009240	srpra	100	68.356	Oryzias_latipes_hni
ENSMUSG00000032042	Srpr	86	89.394	ENSORLG00015015405	srpra	100	68.510	Oryzias_latipes_hsok
ENSMUSG00000032042	Srpr	86	89.394	ENSOMEG00000005872	srpra	100	68.510	Oryzias_melastigma
ENSMUSG00000032042	Srpr	100	96.546	ENSOGAG00000008926	SRPRA	100	96.546	Otolemur_garnettii
ENSMUSG00000032042	Srpr	100	91.108	ENSOARG00000012397	SRPRA	100	92.200	Ovis_aries
ENSMUSG00000032042	Srpr	100	97.179	ENSPPAG00000030813	SRPRA	100	97.179	Pan_paniscus
ENSMUSG00000032042	Srpr	100	95.618	ENSPPRG00000001542	SRPRA	100	95.618	Panthera_pardus
ENSMUSG00000032042	Srpr	100	95.462	ENSPTIG00000006989	SRPRA	100	95.462	Panthera_tigris_altaica
ENSMUSG00000032042	Srpr	100	97.179	ENSPTRG00000028360	SRPRA	100	97.179	Pan_troglodytes
ENSMUSG00000032042	Srpr	100	97.179	ENSPANG00000010858	SRPRA	100	97.179	Papio_anubis
ENSMUSG00000032042	Srpr	86	87.121	ENSPKIG00000016106	srpra	100	66.461	Paramormyrops_kingsleyae
ENSMUSG00000032042	Srpr	86	93.182	ENSPSIG00000012009	SRPRA	100	76.847	Pelodiscus_sinensis
ENSMUSG00000032042	Srpr	86	88.636	ENSPMGG00000001393	srpra	100	68.865	Periophthalmus_magnuspinnatus
ENSMUSG00000032042	Srpr	100	99.057	ENSPEMG00000018279	Srpr	100	99.057	Peromyscus_maniculatus_bairdii
ENSMUSG00000032042	Srpr	86	84.848	ENSPMAG00000009559	srpra	99	61.633	Petromyzon_marinus
ENSMUSG00000032042	Srpr	100	89.515	ENSPCIG00000010207	SRPRA	100	89.828	Phascolarctos_cinereus
ENSMUSG00000032042	Srpr	86	89.394	ENSPFOG00000003114	srpra	100	69.985	Poecilia_formosa
ENSMUSG00000032042	Srpr	86	89.394	ENSPLAG00000007323	srpra	100	69.985	Poecilia_latipinna
ENSMUSG00000032042	Srpr	86	89.394	ENSPMEG00000015658	srpra	100	69.985	Poecilia_mexicana
ENSMUSG00000032042	Srpr	86	89.394	ENSPREG00000004937	srpra	100	69.484	Poecilia_reticulata
ENSMUSG00000032042	Srpr	89	98.684	ENSPPYG00000004045	SRPRA	100	98.684	Pongo_abelii
ENSMUSG00000032042	Srpr	64	99.225	ENSPCAG00000003801	-	64	99.225	Procavia_capensis
ENSMUSG00000032042	Srpr	100	96.238	ENSPCOG00000025726	SRPRA	100	96.238	Propithecus_coquereli
ENSMUSG00000032042	Srpr	100	95.768	ENSPVAG00000000993	SRPRA	100	95.768	Pteropus_vampyrus
ENSMUSG00000032042	Srpr	86	89.394	ENSPNYG00000012371	srpra	100	67.835	Pundamilia_nyererei
ENSMUSG00000032042	Srpr	86	89.394	ENSPNAG00000013476	srpra	100	66.159	Pygocentrus_nattereri
ENSMUSG00000032042	Srpr	100	99.057	ENSRNOG00000010543	Srpra	100	99.057	Rattus_norvegicus
ENSMUSG00000032042	Srpr	100	97.179	ENSRBIG00000008702	SRPRA	100	97.179	Rhinopithecus_bieti
ENSMUSG00000032042	Srpr	100	96.714	ENSRROG00000029494	SRPRA	100	96.714	Rhinopithecus_roxellana
ENSMUSG00000032042	Srpr	74	39.130	YDR292C	-	76	37.526	Saccharomyces_cerevisiae
ENSMUSG00000032042	Srpr	100	96.552	ENSSBOG00000035892	SRPRA	100	96.552	Saimiri_boliviensis_boliviensis
ENSMUSG00000032042	Srpr	94	90.199	ENSSHAG00000009168	SRPRA	100	90.199	Sarcophilus_harrisii
ENSMUSG00000032042	Srpr	86	87.879	ENSSFOG00015008837	srpra	100	66.822	Scleropages_formosus
ENSMUSG00000032042	Srpr	86	88.636	ENSSMAG00000002783	srpra	100	66.927	Scophthalmus_maximus
ENSMUSG00000032042	Srpr	86	88.636	ENSSDUG00000013920	srpra	100	67.606	Seriola_dumerili
ENSMUSG00000032042	Srpr	86	88.636	ENSSLDG00000008601	srpra	93	67.325	Seriola_lalandi_dorsalis
ENSMUSG00000032042	Srpr	86	96.212	ENSSARG00000012434	SRPRA	86	100.000	Sorex_araneus
ENSMUSG00000032042	Srpr	100	77.006	ENSSPUG00000018221	SRPRA	100	77.160	Sphenodon_punctatus
ENSMUSG00000032042	Srpr	86	89.394	ENSSPAG00000005103	srpra	100	67.580	Stegastes_partitus
ENSMUSG00000032042	Srpr	100	95.611	ENSSSCG00000015227	SRPRA	100	95.611	Sus_scrofa
ENSMUSG00000032042	Srpr	86	93.939	ENSTGUG00000000815	SRPRA	100	75.083	Taeniopygia_guttata
ENSMUSG00000032042	Srpr	86	88.636	ENSTRUG00000006856	srpra	100	67.278	Takifugu_rubripes
ENSMUSG00000032042	Srpr	86	89.394	ENSTNIG00000010316	srpra	100	64.795	Tetraodon_nigroviridis
ENSMUSG00000032042	Srpr	100	94.679	ENSTTRG00000001558	SRPRA	100	94.679	Tursiops_truncatus
ENSMUSG00000032042	Srpr	100	95.931	ENSUAMG00000005510	SRPRA	100	95.931	Ursus_americanus
ENSMUSG00000032042	Srpr	86	98.485	ENSUMAG00000002269	SRPRA	99	87.622	Ursus_maritimus
ENSMUSG00000032042	Srpr	69	99.225	ENSVPAG00000001077	SRPRA	75	99.225	Vicugna_pacos
ENSMUSG00000032042	Srpr	100	95.768	ENSVVUG00000020094	SRPRA	100	95.768	Vulpes_vulpes
ENSMUSG00000032042	Srpr	86	88.636	ENSXETG00000003920	srpra	100	63.070	Xenopus_tropicalis
ENSMUSG00000032042	Srpr	86	89.394	ENSXCOG00000001286	srpra	100	61.682	Xiphophorus_couchianus
ENSMUSG00000032042	Srpr	86	89.394	ENSXMAG00000028401	srpra	100	69.466	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003924	GTPase activity	21873635.	IBA	Function
GO:0005047	signal recognition particle binding	21873635.	IBA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0005783	endoplasmic reticulum	-	IEA	Component
GO:0005785	signal recognition particle receptor complex	-	IEA	Component
GO:0005789	endoplasmic reticulum membrane	21873635.	IBA	Component
GO:0006605	protein targeting	21873635.	IBA	Process
GO:0006614	SRP-dependent cotranslational protein targeting to membrane	-	IEA	Process
GO:0006886	intracellular protein transport	-	IEA	Process
GO:0016020	membrane	21873635.	IBA	Component
GO:0016020	membrane	22375059.	ISO	Component
GO:0045047	protein targeting to ER	21873635.	IBA	Process