EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000032058 (Gene tree)
Gene ID: 73699
Gene Symbol: Ppp2r1b
Alias: 2410091N08Rik
Full Name: protein phosphatase 2%2C regulatory subunit A%2C beta
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 48929
Position: chr9: 50845301-50894229
Accession: 1920949
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000177454	-	721	-	-	- (aa)	-	-
ENSMUST00000114437	-	3430	XM_006510642	ENSMUSP00000110080	601 (aa)	XP_006510705	Q7TNP2
ENSMUST00000174555	-	529	-	-	- (aa)	-	-
ENSMUST00000034560	-	3647	-	ENSMUSP00000034560	658 (aa)	-	Q3TTF6
ENSMUST00000174628	-	2195	-	ENSMUSP00000133404	694 (aa)	-	G3UWS4
ENSMUST00000175926	-	2303	-	ENSMUSP00000134886	135 (aa)	-	H3BJ83
ENSMUST00000176055	-	907	-	ENSMUSP00000135253	93 (aa)	-	H3BK50
ENSMUST00000176414	-	547	-	-	- (aa)	-	-
ENSMUST00000176798	-	2074	XM_006510641	ENSMUSP00000135525	667 (aa)	XP_006510704	H3BKU1
ENSMUST00000175640	-	1523	-	ENSMUSP00000134740	474 (aa)	-	H3BIV7
ENSMUST00000176349	-	1890	-	ENSMUSP00000135758	603 (aa)	-	H3BLE7
ENSMUST00000175645	-	1931	-	ENSMUSP00000135871	556 (aa)	-	H3BLQ0

Gene Model

Click here to download ENSMUSG00000032058's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu03015	mRNA surveillance pathway	KEGG
mmu04071	Sphingolipid signaling pathway	KEGG
mmu04114	Oocyte meiosis	KEGG
mmu04151	PI3K-Akt signaling pathway	KEGG
mmu04152	AMPK signaling pathway	KEGG
mmu04261	Adrenergic signaling in cardiomyocytes	KEGG
mmu04350	TGF-beta signaling pathway	KEGG
mmu04390	Hippo signaling pathway	KEGG
mmu04530	Tight junction	KEGG
mmu04728	Dopaminergic synapse	KEGG
mmu04730	Long-term depression	KEGG
mmu05142	Chagas disease (American trypanosomiasis)	KEGG
mmu05160	Hepatitis C	KEGG
mmu05165	Human papillomavirus infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000032058's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000032058	Ppp2r1b	97	62.027	WBGene00003901	paa-1	98	62.003	Caenorhabditis_elegans
ENSMUSG00000032058	Ppp2r1b	96	71.675	FBgn0260439	Pp2A-29B	98	71.799	Drosophila_melanogaster
ENSMUSG00000032058	Ppp2r1b	100	95.674	ENSG00000137713	PPP2R1B	97	96.207	Homo_sapiens
ENSMUSG00000032058	Ppp2r1b	98	86.735	ENSG00000105568	PPP2R1A	100	85.610	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000159	protein phosphatase type 2A complex	21873635.	IBA	Component
GO:0004722	protein serine/threonine phosphatase activity	21873635.	IBA	Function
GO:0005515	protein binding	21172653.	IPI	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0019888	protein phosphatase regulator activity	21873635.	IBA	Function
GO:0045121	membrane raft	-	ISO	Component
GO:0045202	synapse	24413018.	EXP	Component
GO:0045202	synapse	24413018.	IDA	Component
GO:0060561	apoptotic process involved in morphogenesis	-	ISO	Process
GO:0098978	glutamatergic synapse	24413018.	EXP	Component
GO:0098978	glutamatergic synapse	24413018.	IDA	Component
GO:2001241	positive regulation of extrinsic apoptotic signaling pathway in absence of ligand	-	ISO	Process