EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000032076 (Gene tree)
Gene ID: 54725
Gene Symbol: Cadm1
Alias: 2900073G06Rik|3100001I08Rik|Igsf4|Igsf4a|Necl2|RA175A|RA175B|RA175C|RA175N|SgIGSF|SynCam|Tslc1
Full Name: cell adhesion molecule 1
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 327465
Position: chr9: 47530173-47857637
Accession: 1889272
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000152459	-	1784	XM_006510497	ENSMUSP00000124119	474 (aa)	XP_006510560	E9PYN1
ENSMUST00000114547	-	4444	-	ENSMUSP00000110194	445 (aa)	-	Q8R5M8
ENSMUST00000114548	-	4482	-	ENSMUSP00000110195	428 (aa)	-	Q8R5M8
ENSMUST00000034581	-	1254	-	ENSMUSP00000034581	417 (aa)	-	Q8R5M8
ENSMUST00000085909	-	2126	XM_017313489	ENSMUSP00000083073	456 (aa)	XP_017168978	Q8R5M8
ENSMUST00000148925	-	4767	-	-	- (aa)	-	-
ENSMUST00000214542	-	899	-	ENSMUSP00000149715	63 (aa)	-	A0A1L1SS08
ENSMUST00000143026	-	1643	-	ENSMUSP00000124555	390 (aa)	-	E0CY16
ENSMUST00000124073	-	1371	-	-	- (aa)	-	-
ENSMUST00000151624	-	1112	-	-	- (aa)	-	-

Gene Model

Click here to download ENSMUSG00000032076's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04514	Cell adhesion molecules (CAMs)	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000032076's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001889	liver development	-	ISO	Process
GO:0002376	immune system process	-	IEA	Process
GO:0005102	signaling receptor binding	15811952.	IPI	Function
GO:0005102	signaling receptor binding	-	ISO	Function
GO:0005515	protein binding	12202822.12826663.18055550.21880726.	IPI	Function
GO:0005886	plasma membrane	15707673.	IDA	Component
GO:0005886	plasma membrane	-	ISO	Component
GO:0005911	cell-cell junction	12826663.22512338.	IDA	Component
GO:0006915	apoptotic process	-	IEA	Process
GO:0007155	cell adhesion	12202822.	IDA	Process
GO:0007156	homophilic cell adhesion via plasma membrane adhesion molecules	12826663.	IDA	Process
GO:0007157	heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules	12826663.	IDA	Process
GO:0007275	multicellular organism development	-	IEA	Process
GO:0007283	spermatogenesis	-	IEA	Process
GO:0007416	synapse assembly	12202822.21145003.	IDA	Process
GO:0007416	synapse assembly	21145003.	IMP	Process
GO:0008021	synaptic vesicle	12202822.	IDA	Component
GO:0008037	cell recognition	15811952.	IDA	Process
GO:0008037	cell recognition	-	ISO	Process
GO:0009826	unidimensional cell growth	18055550.	IMP	Process
GO:0014069	postsynaptic density	-	ISO	Component
GO:0016020	membrane	-	IEA	Component
GO:0016021	integral component of membrane	-	IEA	Component
GO:0016323	basolateral plasma membrane	12826663.	IDA	Component
GO:0016338	calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules	12202822.	IDA	Process
GO:0030054	cell junction	-	IEA	Component
GO:0030154	cell differentiation	-	IEA	Process
GO:0030165	PDZ domain binding	12826663.	IPI	Function
GO:0030424	axon	15707673.	IDA	Component
GO:0030425	dendrite	15707673.	IDA	Component
GO:0042271	susceptibility to natural killer cell mediated cytotoxicity	21873635.	IBA	Process
GO:0042271	susceptibility to natural killer cell mediated cytotoxicity	15811952.	IDA	Process
GO:0042271	susceptibility to natural killer cell mediated cytotoxicity	-	ISO	Process
GO:0042803	protein homodimerization activity	12826663.	IDA	Function
GO:0043005	neuron projection	-	ISO	Component
GO:0043196	varicosity	21482734.	IDA	Component
GO:0045202	synapse	12202822.	IDA	Component
GO:0045954	positive regulation of natural killer cell mediated cytotoxicity	15811952.	IDA	Process
GO:0045954	positive regulation of natural killer cell mediated cytotoxicity	-	ISO	Process
GO:0050715	positive regulation of cytokine secretion	-	ISO	Process
GO:0050839	cell adhesion molecule binding	-	ISO	Function
GO:0051606	detection of stimulus	15811952.	IDA	Process
GO:0051606	detection of stimulus	-	ISO	Process
GO:0060348	bone development	22876197.	IMP	Process
GO:0070852	cell body fiber	21482734.	IDA	Component
GO:0098685	Schaffer collateral - CA1 synapse	21145003.26687224.	IDA	Component
GO:0098685	Schaffer collateral - CA1 synapse	21145003.	IMP	Component
GO:0098880	maintenance of postsynaptic specialization structure	21145003.	IDA	Process
GO:0098880	maintenance of postsynaptic specialization structure	21145003.	IMP	Process
GO:0098942	retrograde trans-synaptic signaling by trans-synaptic protein complex	23209303.	EXP	Process
GO:0098942	retrograde trans-synaptic signaling by trans-synaptic protein complex	23209303.	IDA	Process
GO:0098942	retrograde trans-synaptic signaling by trans-synaptic protein complex	23209303.	IMP	Process
GO:0098978	glutamatergic synapse	12202822.	EXP	Component
GO:0098978	glutamatergic synapse	12202822.	IDA	Component
GO:0099054	presynapse assembly	12202822.	EXP	Process
GO:0099054	presynapse assembly	12202822.	IDA	Process
GO:0099055	integral component of postsynaptic membrane	26687224.	IDA	Component
GO:0099056	integral component of presynaptic membrane	26687224.	IDA	Component
GO:0099560	synaptic membrane adhesion	18003830.	IDA	Process