EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000032085 (Gene tree)
Gene ID: 21345
Gene Symbol: Tagln
Alias: SM-22 alpha|SM22|SM22alpha|Sm22a
Full Name: transgelin
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Minus strand
Length: 6440
Position: chr9: 45929619-45936058
Accession: 106012
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000034590	-	1595	-	ENSMUSP00000034590	201 (aa)	-	P37804
ENSMUST00000216035	-	933	-	-	- (aa)	-	-
ENSMUST00000215509	-	369	-	ENSMUSP00000150408	109 (aa)	-	A0A1L1STN8

Gene Model

Click here to download ENSMUSG00000032085's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000032085's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000032085	Tagln	100	98.165	ENSG00000149591	TAGLN	100	97.802	Homo_sapiens

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005737	cytoplasm	-	IEA	Component
GO:0007010	cytoskeleton organization	11158319.	IMP	Process
GO:0030855	epithelial cell differentiation	-	ISO	Process
GO:0051015	actin filament binding	-	IEA	Function