EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Gene Ontology

Description

Ensembl ID: ENSMUSG00000032216 (Gene tree)
Gene ID: 17999
Gene Symbol: Nedd4
Alias: E430025J12Rik|Nedd4|Nedd4-1|Nedd4a
Full Name: neural precursor cell expressed%2C developmentally down-regulated 4
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 87507
Position: chr9: 72662346-72749852
Accession: 97297
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000184287	-	779	-	-	- (aa)	-	-
ENSMUST00000184020	-	1368	-	ENSMUSP00000139297	30 (aa)	-	V9GXS6
ENSMUST00000184180	-	2348	-	-	- (aa)	-	-
ENSMUST00000184386	-	312	-	-	- (aa)	-	-
ENSMUST00000034740	-	5499	XM_011242672	ENSMUSP00000034740	887 (aa)	XP_011240974	P46935
ENSMUST00000184333	-	4034	-	ENSMUSP00000139190	195 (aa)	-	V9GXK3
ENSMUST00000184737	-	1260	-	-	- (aa)	-	-
ENSMUST00000183375	-	660	-	ENSMUSP00000138852	196 (aa)	-	V9GWV8
ENSMUST00000183451	-	550	-	-	- (aa)	-	-
ENSMUST00000184450	-	3329	-	ENSMUSP00000138983	305 (aa)	-	Q3V335

Gene Model

Click here to download ENSMUSG00000032216's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu04120	Ubiquitin mediated proteolysis	KEGG
mmu04144	Endocytosis	KEGG
mmu04530	Tight junction	KEGG
mmu05169	Epstein-Barr virus infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000032216's network

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000122	negative regulation of transcription by RNA polymerase II	20026598.	IMP	Process
GO:0000151	ubiquitin ligase complex	11042109.	IPI	Component
GO:0000209	protein polyubiquitination	21873635.	IBA	Process
GO:0002250	adaptive immune response	18931680.	IMP	Process
GO:0003151	outflow tract morphogenesis	20026598.	IGI	Process
GO:0003151	outflow tract morphogenesis	20026598.	IMP	Process
GO:0003197	endocardial cushion development	20026598.	IGI	Process
GO:0003197	endocardial cushion development	20026598.	IMP	Process
GO:0004842	ubiquitin-protein transferase activity	-	ISO	Function
GO:0005515	protein binding	10446181.11042109.11717310.15060076.17544362.20159449.21920314.22768111.28784777.	IPI	Function
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	14973438.	IDA	Component
GO:0005829	cytosol	9182527.19794060.	IDA	Component
GO:0005886	plasma membrane	-	IEA	Component
GO:0005902	microvillus	-	ISO	Component
GO:0006511	ubiquitin-dependent protein catabolic process	21873635.	IBA	Process
GO:0006511	ubiquitin-dependent protein catabolic process	18931680.	IMP	Process
GO:0006513	protein monoubiquitination	21920314.	IDA	Process
GO:0006622	protein targeting to lysosome	21873635.	IBA	Process
GO:0007399	nervous system development	-	IEA	Process
GO:0007528	neuromuscular junction development	21873635.	IBA	Process
GO:0007528	neuromuscular junction development	19345204.	IMP	Process
GO:0008022	protein C-terminus binding	-	ISO	Function
GO:0010766	negative regulation of sodium ion transport	10212229.	IDA	Process
GO:0016020	membrane	14973438.	IDA	Component
GO:0016567	protein ubiquitination	21873635.	IBA	Process
GO:0016567	protein ubiquitination	9182527.	IDA	Process
GO:0016567	protein ubiquitination	26280536.	ISO	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0019871	sodium channel inhibitor activity	10212229.	IDA	Function
GO:0030948	negative regulation of vascular endothelial growth factor receptor signaling pathway	15060076.	IDA	Process
GO:0031175	neuron projection development	21873635.	IBA	Process
GO:0031623	receptor internalization	21873635.	IBA	Process
GO:0032801	receptor catabolic process	21873635.	IBA	Process
GO:0035255	ionotropic glutamate receptor binding	25505317.	IDA	Function
GO:0042110	T cell activation	18931680.	IMP	Process
GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	21873635.	IBA	Process
GO:0043197	dendritic spine	21873635.	IBA	Component
GO:0043197	dendritic spine	25505317.	IDA	Component
GO:0045121	membrane raft	-	ISO	Component
GO:0045732	positive regulation of protein catabolic process	21873635.	IBA	Process
GO:0045732	positive regulation of protein catabolic process	11748237.	IDA	Process
GO:0045732	positive regulation of protein catabolic process	-	ISO	Process
GO:0048514	blood vessel morphogenesis	20026598.	IGI	Process
GO:0048514	blood vessel morphogenesis	20026598.	IMP	Process
GO:0048814	regulation of dendrite morphogenesis	21873635.	IBA	Process
GO:0048814	regulation of dendrite morphogenesis	20159449.	IMP	Process
GO:0048814	regulation of dendrite morphogenesis	-	ISO	Process
GO:0050807	regulation of synapse organization	21873635.	IBA	Process
GO:0050807	regulation of synapse organization	19345204.	IMP	Process
GO:0050815	phosphoserine residue binding	10037602.	IDA	Function
GO:0050816	phosphothreonine residue binding	10037602.	IDA	Function
GO:0061630	ubiquitin protein ligase activity	21873635.	IBA	Function
GO:0061630	ubiquitin protein ligase activity	9182527.11717310.	IDA	Function
GO:0070064	proline-rich region binding	9305852.11748237.	IPI	Function
GO:0070534	protein K63-linked ubiquitination	-	ISO	Process
GO:0098978	glutamatergic synapse	25505317.	EXP	Component
GO:0098978	glutamatergic synapse	25505317.	IDA	Component
GO:0098978	glutamatergic synapse	-	ISO	Component
GO:0099149	regulation of postsynaptic neurotransmitter receptor internalization	-	ISO	Process
GO:0099524	postsynaptic cytosol	25505317.	EXP	Component
GO:0099524	postsynaptic cytosol	25505317.	IDA	Component
GO:0099576	regulation of protein catabolic process at postsynapse, modulating synaptic transmission	-	ISO	Process
GO:2000650	negative regulation of sodium ion transmembrane transporter activity	21873635.	IBA	Process