EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000032279 (Gene tree)
Gene ID: 67834
Gene Symbol: Idh3a
Alias: 1500012E04Rik
Full Name: isocitrate dehydrogenase 3 (NAD+) alpha
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 18328
Position: chr9: 54586334-54604661
Accession: 1915084
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	IC & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084
27452465	The Cardiomyocyte RNA Binding Proteome: Links to Intermediary Metabolism and Heart Disease	RBDmap & HL_1	2016 Jul 21	Liao Y	DOI: 10.1016/j.celrep.2016.06.084

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000217484	-	2580	-	ENSMUSP00000150296	384 (aa)	-	A0A1L1STE6
ENSMUST00000215273	-	1812	-	ENSMUSP00000149036	37 (aa)	-	A0A1L1SQF9
ENSMUST00000213729	-	2517	-	-	- (aa)	-	-
ENSMUST00000214136	-	1570	-	-	- (aa)	-	-
ENSMUST00000167866	-	2403	-	ENSMUSP00000127526	366 (aa)	-	Q9D6R2

Gene Model

Click here to download ENSMUSG00000032279's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu00020	Citrate cycle (TCA cycle)	KEGG
mmu01100	Metabolic pathways	KEGG
mmu01200	Carbon metabolism	KEGG
mmu01210	2-Oxocarboxylic acid metabolism	KEGG
mmu01230	Biosynthesis of amino acids	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000032279's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000032279	Idh3a	94	70.725	WBGene00009664	idha-1	96	70.725	Caenorhabditis_elegans
ENSMUSG00000032279	Idh3a	90	40.708	WBGene00007993	idhb-1	88	40.708	Caenorhabditis_elegans
ENSMUSG00000032279	Idh3a	94	70.845	FBgn0027291	l(1)G0156	97	70.845	Drosophila_melanogaster
ENSMUSG00000032279	Idh3a	93	42.566	FBgn0038922	Idh3b	92	42.566	Drosophila_melanogaster
ENSMUSG00000032279	Idh3a	92	45.748	YNL037C		93	45.748	Saccharomyces_cerevisiae
ENSMUSG00000032279	Idh3a	90	36.932	YIL094C	LYS12	94	36.932	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000287	magnesium ion binding	-	ISO	Function
GO:0004449	isocitrate dehydrogenase (NAD+) activity	-	ISO	Function
GO:0005739	mitochondrion	14651853.18614015.	HDA	Component
GO:0005739	mitochondrion	-	ISO	Component
GO:0006099	tricarboxylic acid cycle	-	ISO	Process
GO:0006102	isocitrate metabolic process	-	ISO	Process
GO:0006103	2-oxoglutarate metabolic process	-	ISO	Process
GO:0006734	NADH metabolic process	-	ISO	Process
GO:0016491	oxidoreductase activity	-	IEA	Function
GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	-	IEA	Function
GO:0043209	myelin sheath	17634366.	HDA	Component
GO:0046872	metal ion binding	-	IEA	Function
GO:0051287	NAD binding	-	IEA	Function
GO:0055114	oxidation-reduction process	-	IEA	Process