EuRBPDB

Description

RBPome

Expression

Transcripts

Gene Model

Pathways

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSMUSG00000032294 (Gene tree)
Gene ID: 18746
Gene Symbol: Pkm
Alias: Pk-2|Pk-3|Pk3|Pkm2
Full Name: pyruvate kinase%2C muscle
Gene Type: protein_coding
Species: Mus_musculus
Status: putative
Strand: Plus strand
Length: 23008
Position: chr9: 59656368-59679375
Accession: 97591
RBP type: non-canonical RBP
Summary: -

RNA binding proteome (RBPome)

PID	Title	Method	Time	Author	Doi
27768875	High Resolution Mapping of RNA Binding Regions in the Nuclear Proteome of Embryonic Stem Cells	nIC & mESC	2016.09	He C	DOI: 10.1016/j.molcel.2016.09.034
27281784	Identification of RNA binding Proteins in Macrophages by Interactome Capture	IC & RAW264.7	2016 Jun 8	Liepelt A	DOI: 10.1074/mcp.M115.056564
23912277	The RNA binding protein repertoire of embryonic stem cells	IC & mESC	2013 Aug 4	Kwon SC	DOI: 10.1038/nsmb.2638

Expression

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMUST00000213930	-	1017	-	ENSMUSP00000150578	232 (aa)	-	A0A1L1SU37
ENSMUST00000216620	-	356	-	ENSMUSP00000151199	51 (aa)	-	A0A1L1SVH2
ENSMUST00000217038	-	625	-	ENSMUSP00000150509	184 (aa)	-	A0A1L1STV8
ENSMUST00000034834	-	2432	XM_006510855	ENSMUSP00000034834	531 (aa)	XP_006510918	P52480
ENSMUST00000216857	-	718	-	ENSMUSP00000150188	102 (aa)	-	A0A1L1ST52
ENSMUST00000215660	-	743	-	ENSMUSP00000149206	187 (aa)	-	A0A1L1SQV8
ENSMUST00000214571	-	2113	-	-	- (aa)	-	-
ENSMUST00000163694	-	2041	XM_011242673	ENSMUSP00000128770	531 (aa)	XP_011240975	P52480
ENSMUST00000215623	-	725	-	ENSMUSP00000150901	155 (aa)	-	A0A1L1SUV0
ENSMUST00000213220	-	747	-	-	- (aa)	-	-
ENSMUST00000217353	-	582	-	ENSMUSP00000149983	176 (aa)	-	A0A1L1SSN6

Gene Model

Click here to download ENSMUSG00000032294's gene model file

Pathways

Pathway ID	Pathway Name	Source
mmu00010	Glycolysis / Gluconeogenesis	KEGG
mmu00230	Purine metabolism	KEGG
mmu00620	Pyruvate metabolism	KEGG
mmu01100	Metabolic pathways	KEGG
mmu01200	Carbon metabolism	KEGG
mmu01230	Biosynthesis of amino acids	KEGG
mmu04922	Glucagon signaling pathway	KEGG
mmu04930	Type II diabetes mellitus	KEGG
mmu05165	Human papillomavirus infection	KEGG
mmu05203	Viral carcinogenesis	KEGG
mmu05230	Central carbon metabolism in cancer	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMUSG00000032294's network

Orthologs identified by RBPome

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMUSG00000032294	Pkm	97	66.148	FBgn0267385	PyK	99	66.341	Drosophila_melanogaster
ENSMUSG00000032294	Pkm	100	97.845	ENSG00000067225	PKM	100	97.938	Homo_sapiens
ENSMUSG00000032294	Pkm	95	50.297	YAL038W	CDC19	99	50.297	Saccharomyces_cerevisiae

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0000287	magnesium ion binding	-	IEA	Function
GO:0001889	liver development	-	ISO	Process
GO:0001917	photoreceptor inner segment	26780311.	IDA	Component
GO:0003824	catalytic activity	-	IEA	Function
GO:0004743	pyruvate kinase activity	21873635.	IBA	Function
GO:0004743	pyruvate kinase activity	7262549.7295297.	IDA	Function
GO:0004743	pyruvate kinase activity	-	ISO	Function
GO:0005515	protein binding	17500595.18191611.18519040.24390569.	IPI	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	-	ISO	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	-	ISO	Component
GO:0005739	mitochondrion	14651853.	HDA	Component
GO:0005829	cytosol	-	ISO	Component
GO:0005929	cilium	16687649.	IDA	Component
GO:0006006	glucose metabolic process	-	ISO	Process
GO:0006096	glycolytic process	21873635.	IBA	Process
GO:0006096	glycolytic process	7262549.7295297.	IDA	Process
GO:0006096	glycolytic process	-	ISO	Process
GO:0006754	ATP biosynthetic process	-	ISO	Process
GO:0008152	metabolic process	-	IEA	Process
GO:0012501	programmed cell death	-	ISO	Process
GO:0016301	kinase activity	-	IEA	Function
GO:0016310	phosphorylation	-	IEA	Process
GO:0016740	transferase activity	-	IEA	Function
GO:0030955	potassium ion binding	-	IEA	Function
GO:0031100	animal organ regeneration	-	ISO	Process
GO:0032869	cellular response to insulin stimulus	21873635.	IBA	Process
GO:0042802	identical protein binding	-	ISO	Function
GO:0042866	pyruvate biosynthetic process	-	ISO	Process
GO:0043209	myelin sheath	17634366.	HDA	Component
GO:0043403	skeletal muscle tissue regeneration	-	ISO	Process
GO:0043531	ADP binding	-	ISO	Function
GO:0046872	metal ion binding	-	IEA	Function
GO:0051289	protein homotetramerization	-	ISO	Process
GO:0062023	collagen-containing extracellular matrix	23658023.	HDA	Component
GO:0070324	thyroid hormone binding	-	ISO	Function
GO:1902912	pyruvate kinase complex	-	ISO	Component
GO:1903672	positive regulation of sprouting angiogenesis	-	ISO	Process